G63107


Basic Information

Item Value
gene id G63107
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9647552 ~ 9650188 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85155
AATATTCAAATGGGTCTTTATTGCGTACATCTTCCATGTACGTTTACAgatcatacatacatatatacattatttccCATGTATAATTACTCTCTATCAACAACGTTtgataatttactgtatttcacacATTGTACATATTAAGCCACACATTTAATTCATCACCCGGTCATGTTAAGAACACAAGACATAAGACACCTGTACAGAACGCCCATTTAGTTTTAAGGTCTCTGTTGTTTTTCGAACACTACGAGTTGATGGCTAATGGTTCAGTACAGAAGCTCACAATGGACGGAACACACTGGATGATGAAAGACTGCAGCACAGTGCTTACGTGTTACAGATGGGCAAGGCTTCACAGTAGGCCAATACCTGCATTTgaacccatacacacacattcacattcacacagaATGAATGCACACAGGACCGAAGACTGGAGACTACACTATCGAGCGTACTGGTTTTGAGGAACAAACCATTGTGGCGGCGTTTGTGCTGCGTCACATGGTGGGGAATGCACTGGGGTTTGGATCATGCTCTGTCAACTGGCAGCACATTCATAATAATGCAGTTAActagatatacagtatactgtggGTTGTGTTGCACTATTGCTTACATCATACTGCTTGGGAGGAGGTGTTTGAGACTTACAGTATGTGCTGTAAAAACTAGATGTTGAGAAGGTTAATGAGTGAAGTTGAGGCTTATAATACACACTGGTTGACTGTAGAGTAGGGTTGCACTAtacataattttaccatgtGCCGTTATTACATTGCAGGGCATGCAATGTCACATAAGGCAAATTAATTTATACACATCATTCTGCAACTCTCTCTGTTCATTGTTCACACcacaattaagcaataatactcTCAAGGtccgtgctataatgtgtaatattggcactgctgtgctgcggtcgtaggcATGAgtccaatattacacattatagcacaaacctcaggtattattgcaattatacaaCAGTTCTATTATCGCTGTGTATTGAaagattttttgttaaaaaagatgagaaaaTCCAACCTTTtgattataaacactccgctAGTTAAAATAGGTTCTGAACTAACTGTGatgaaatattgtttattttgcttcAATTTCTGATTcacagagtgcattattaatatcatgacatgttggatcCCAATCTAGAGAAATCTGGTGaacatttctgtatttctttttataatacTGCAAGTACAGATGTCTTGATACAACCAGTGGATCAAGATCCATGCTGATTCAGGCATATCATTATAGATCGGGTATTAGACGTTTTAATCCAAGTCTAGTTTCAAGTCTTTTAACCATTCAGGATGTCATTACGAGCAGtactgaggagagttctcagaaggtaaaCTAAAGAGTTAAGTTACAGTCTGCAagtagaggctaatgctaatactaatatgCTCATATACgctcatatatacagctctggaaaaattaagagaccacttcagattctgaatcagtttttctgatttagctatttatagctatatgtttgagttaaatgaacatcgttgttttattctataaactacagacaacatttcttccaaattcatttagagcatttatttgtagaaaacgagaaatggctgaaatcacaaaaaatacctcaaataatgcaaagaaaacaagttcatattcataaagttttaagagtttagaaattaatatttggtggaataaccctggtttttaatcacagttttcatgcatcttggcatgttctactccacctgtcttacacactgcttttggataactttatgcctttactcctggtgcaaaaaattcaagccgttcagcttggtttgatggcttttgatcatccatcttcctcttaattatattacagaggttttcaattttcaaattggtaaaatagaagaaactcatcatttgtaagtggtctcttttattttttttaacttttactaaATCTAAATGGATTTGACTTAGAATTATATTAATCGTTAGCACATATTATGCACACTGTGTGGCTGTACTATTCATAGAAAAATTAATTGGATTGGTTTTGACTGTTCCTCAGCATTTTAGAGATTTGGATTAATATTGCAGAACAACAAAgtatttagatatattttttctgatattgtgcagccctactataGAGCAATCAGGAAGCGTAAATTGACTTTTAACTGATGTACTGTCCTCTGGAAAACTGACTGTAAGCAATGGCCAGACATGAATGTGCTCATTTTGGTCCTATACTCGGATATCTTTGTATGATAAGGCATTTTGAGTTGATGGAATACATGGGGGCCCAGCTATAAACATCCAGAGAAGAGAAACAGGGTGTATTGCCTTGcacatatttaaaaacacacagtccTTCCAGAGTACCATCCTGGAAGACTCAGTACATTCAGTACATTCACATACTGTACTTTTTCTTCAGTCCGTTCATCGAGCACAGCCAATGATGTTGCTGTATTAGGTATCGAAGCTCCTAGACTCTACCTTTCAATCCACAGGATTCTACAGTCATCTAAAGATAAACAACACGATCAATACTATTCCCTATACCTACATCATCTGTagaggctagctagctaattgcATTCGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85155 True 2637 lncRNA 0.36 1 9647552 9650188

Neighbor

gene id symbol gene type direction distance location
arhgap8 arhgap8 coding downstream 187858 9435114 ~ 9459694 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 380673 9252337 ~ 9266879 (-)
LOC103042700 LOC108425355,LOC108279935 coding downstream 420304 9223714 ~ 9227248 (-)
LOC103045460 NA coding downstream 454987 9170991 ~ 9192565 (-)
LOC103042080 LOC108425318 coding downstream 1057236 8587268 ~ 8590316 (-)
fbln1 NA coding upstream 200742 9850930 ~ 9864019 (-)
LOC103036113 LOC108279889 coding upstream 215172 9865360 ~ 9887488 (-)
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding upstream 336116 9986304 ~ 10032671 (-)
creld2 creld2 coding upstream 744742 10394930 ~ 10405872 (-)
zbed4 zbed4,LOC107735570 coding upstream 774401 10424589 ~ 10433454 (-)
G63105 NA non-coding downstream 5312 9637688 ~ 9642240 (-)
G63042 NA non-coding downstream 161319 9486022 ~ 9486233 (-)
G63041 NA non-coding downstream 165035 9482200 ~ 9482517 (-)
LOC103022044 NA non-coding downstream 228730 9415043 ~ 9418822 (-)
G63034 NA non-coding downstream 238004 9406405 ~ 9409548 (-)
G63125 NA non-coding upstream 240828 9891016 ~ 9891758 (-)
G63131 kdm5a non-coding upstream 257365 9907553 ~ 9909248 (-)
G63136 NA non-coding upstream 264377 9914565 ~ 9916622 (-)
G63169 NA non-coding upstream 423370 10073558 ~ 10074137 (-)
G63170 NA non-coding upstream 424041 10074229 ~ 10074477 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 24764 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 1473736 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2028120 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 2787882 6787342 ~ 6859670 (-)
LOC111192938 NA other downstream 2914427 6727874 ~ 6733125 (-)
G63217 NA other upstream 664611 10314799 ~ 10411231 (-)
G63516 NA other upstream 2670367 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 2715280 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 3155783 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 4191005 13841193 ~ 13887868 (-)

Expression


Co-expression Network