G126680


Basic Information

Item Value
gene id G126680
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 32644818 ~ 32645341 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171073
ACCAAACACTCTCCTCCGGTGCCTTTGAACATCCAGGGTACGGATATTGAGATAGTGAGGTCCTACAAGTACCTGGGTGTCCACCTCAACAACAAGCTGGACTGGACCGACAACACGGCTGCTCTCTACAGGAAAGGTCAGAGCAGACTGCATCTCCTGAGGAGACTCCGGTCCTTTGGCGTGCAGGGGAAACTCCTGATGACCTTCTTTGATGCTGTGGTGGCATCAGCCATCTTTTATGGAGTGGTCTGCTGGGGCAGCAGCATCTCCACCACCGACAGGAAGAGACTGAACAGAATCATCAGGAAGTCCAGCTCTGTCCTGGGGTGTCCTCTGGACCCAGTGGAGGTGGTGGGAGACAGGAGAATGAGGACTAAGCTTAAGAACATGCTGAAGAACCTGTCTCACCCCATGCACCACTCTCTGAAAGCACTGAACAGCTCCTTCAGTGTCCGGCTGCTGCACCCGCGCTGTGTGAAGGAGAGATACCGCAGGTCCTTCCTTCCACACGCCATCAGACttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171073 True 524 TUCP 0.54 1 32644818 32645341

Neighbor

gene id symbol gene type direction distance location
sfswap sfswap,LOC107739738 coding downstream 667507 31765972 ~ 31977311 (-)
mmp17 mmp17,mmp17a,LOC107661370,LOC107692290,LOC107736933,LOC106563158 coding downstream 1017945 31488502 ~ 31626873 (-)
ulk1 ulk1 coding downstream 1189202 31402875 ~ 31455616 (-)
pus1 pus1 coding downstream 1249890 31386454 ~ 31394928 (-)
noc4l noc4l coding downstream 1259956 31373278 ~ 31384862 (-)
kiaa1328 LOC107665221 coding upstream 672851 33318192 ~ 33353629 (-)
LOC103033052 aqp7,LOC103033052,LOC108436844,LOC107739721,LOC107661734,LOC107600917 coding upstream 722295 33367636 ~ 33379332 (-)
ubap2 ubap2 coding upstream 767193 33412534 ~ 33446084 (-)
dcaf12 dcaf12,LOC107754635,LOC107661821,LOC107584538,LOC107665237,LOC107600922 coding upstream 803114 33448455 ~ 33461321 (-)
agxt2 agxt2 coding upstream 865820 33511161 ~ 33530613 (-)
G126668 NA non-coding downstream 83375 32558934 ~ 32561443 (-)
G126667 NA non-coding downstream 95999 32548620 ~ 32548819 (-)
G126660 NA non-coding downstream 130654 32513821 ~ 32514164 (-)
G126656 NA non-coding downstream 173363 32471233 ~ 32471455 (-)
G126655 NA non-coding downstream 175167 32468890 ~ 32469651 (-)
G126681 NA non-coding upstream 8858 32654199 ~ 32654430 (-)
G126692 NA non-coding upstream 82630 32727971 ~ 32728176 (-)
G126697 NA non-coding upstream 91543 32736884 ~ 32779061 (-)
G126699 NA non-coding upstream 140351 32785692 ~ 32786303 (-)
G126707 NA non-coding upstream 212753 32858094 ~ 32858305 (-)
G126502 NA other downstream 1331118 31307550 ~ 31313700 (-)
LOC103024141 man1b1a,LOC103024141,LOC108437506,LOC107661470,LOC107739703,LOC107595674,LOC107692283 other downstream 2097428 30507583 ~ 30547390 (-)
G126126 NA other downstream 2671898 29926802 ~ 29972920 (-)
LOC111193936 NA other downstream 3909736 28726748 ~ 28735082 (-)
LOC111193957 LOC107591795,LOC107679390,LOC107711978,LOC107550511,LOC107707678 other downstream 4943119 27682326 ~ 27701699 (-)
LOC103046968 LOC108436587 other upstream 826146 33471487 ~ 33489590 (-)
LOC103023154 LOC107701925 other upstream 1713429 34358770 ~ 34455459 (-)
cast NA other upstream 2930622 35575963 ~ 35651599 (-)
G127514 dtwd2 other upstream 3321009 35966350 ~ 35972205 (-)
plgrkt NA other upstream 3400223 36045564 ~ 36065437 (-)

Expression


Co-expression Network