G126682


Basic Information

Item Value
gene id G126682
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 32683720 ~ 32684140 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171075
ATGATAGAATTCTGCCCATAACaaattatactttaactctttcaccctctcctaCTCCCCCAATTGTGGCTCCATCATGTCTGCTACAAAACTTGAGGTGTCAATCCTCCACTATCTCTGACCATTCATCTCTGCAGGGACCCAAACTGATAACTGACCACTTGCCTCTGCAGGGACCCTCATCGTTTATATGCTAATTTGAAACCCCCATTAAAGTGACCACCCTGCAGTGTTCAAAGCAGGATCCAATGTATATAATGCCCCCTCAAAATATCCCTAGTTAGATTGCTTCTGATCGACTGACTAAGCTGTGCCCgtgtagattttctgtctgcACGTGAATAAACTCAAGTCAACTCTGAAGCCGTCTCCTGACTCCTGAATCGGACACCTGGTTCCTGAAGGCCGAATTTCTAacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171075 True 421 lncRNA 0.45 1 32683720 32684140

Neighbor

gene id symbol gene type direction distance location
LOC103039386 LOC103039386,LOC108437682,LOC108279294,LOC107661672,LOC107675632,LOC107584535,LOC107736863,LOC107739687 coding upstream 244320 32428412 ~ 32439400 (+)
LOC103024115 LOC108437677,LOC108278636,LOC107662633 coding upstream 266373 32398915 ~ 32417347 (+)
fam219a fam219a,fam219aa,LOC103039079,LOC108278493,LOC107584534,LOC105902504,LOC107661667 coding upstream 297066 32349993 ~ 32386654 (+)
LOC103041132 NA coding upstream 636817 32027325 ~ 32046903 (+)
LOC107197546 NA coding upstream 662662 32008588 ~ 32021058 (+)
celf4 celf4,LOC107584536 coding downstream 471904 33156044 ~ 33295754 (+)
tpgs2 tpgs2 coding downstream 671007 33355147 ~ 33367563 (+)
LOC103034246 LOC108278657,LOC108437744,LOC106565181 coding downstream 702107 33386247 ~ 33398447 (+)
nop56 nop56,LOC107661748 coding downstream 717198 33401338 ~ 33410433 (+)
LOC103034578 LOC108436926,LOC107749412,LOC107558139 coding downstream 779142 33463282 ~ 33470308 (+)
G126666 NA non-coding upstream 143741 32539746 ~ 32539979 (+)
G126665 NA non-coding upstream 160886 32522630 ~ 32522834 (+)
G126654 NA non-coding upstream 214074 32468924 ~ 32469646 (+)
G126626 NA non-coding upstream 238080 32445004 ~ 32445640 (+)
G126625 NA non-coding upstream 240105 32441273 ~ 32443615 (+)
G126706 NA non-coding downstream 173958 32858098 ~ 32858298 (+)
G126713 NA non-coding downstream 265204 32949344 ~ 32949694 (+)
G126718 NA non-coding downstream 340359 33024499 ~ 33024710 (+)
G126724 NA non-coding downstream 436041 33120181 ~ 33120388 (+)
G126725 NA non-coding downstream 574295 33258435 ~ 33296551 (+)
G126632 NA other upstream 280889 32402190 ~ 32402831 (+)
G126613 LOC108415780 other upstream 389976 32293364 ~ 32293744 (+)
G126040 LOC108436799,LOC104955091,LOC103374273,LOC100049520,LOC107397331,LOC101074260 other upstream 2823503 29856038 ~ 29860217 (+)
G126011 NA other upstream 2940087 29737298 ~ 29743633 (+)
snrpd3 snrpd3,smd3,LOC106563120,LOC105014836 other upstream 3204350 29473460 ~ 29479370 (+)
G126702 NA other downstream 148822 32832962 ~ 32833466 (+)
G126708 NA other downstream 178741 32862881 ~ 32863456 (+)
dnajc21 dnajc21 other downstream 728398 33412538 ~ 33508922 (+)
trnam-cau_22 NA other downstream 803910 33488050 ~ 33488121 (+)
G126903 lman1,LOC107662211,LOC107739740 other downstream 1181364 33865504 ~ 33875369 (+)

Expression


Co-expression Network