G126902


Basic Information

Item Value
gene id G126902
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 33851965 ~ 33860086 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171381
CCGTTTATGTAAATTGTTtgagagaaaaatataatttgtccAAGTTTCAAAGATTCAAAACACATTCAGAACCCCTGGGCCTTGGCGTAGTGGGTTTGGCAGTTCTGCTACAACACTGGAATACTGCATTTCCCCCTGGAAAAAGAACAAATTCTGCTTCCAATGATCTAGATTCCACAGTACAGCAACAGTTCAGGGGACAGTGGTTGAGTtcctgaagcaaaaaaaaacatgtagaaCAGTGTGCCGTACAAATTCAGAACATTCTCTCTCTGAGGACTAACAAATATATTACATCGGATTTGGGGATCTTAAACCAATACATCTCACACTCGCAAGAGGGACCATTCATTCACACCCCGTACAGTTCagatcaaattaaaaaatgaattaaaagaaaaaaaaaaataatcaaaatatttcagttttcaaatacattaacttacagcttttaaacaaaaaacataacacAAACAATAACTATCCCTCATTTAAATACTAATCAAATGTTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171381 True 514 lncRNA 0.35 2 33851965 33860086

Neighbor

gene id symbol gene type direction distance location
grp NA coding upstream 27481 33817577 ~ 33824484 (+)
nedd4l nedd4l,LOC108438193 coding upstream 133377 33584321 ~ 33718588 (+)
LOC103034578 LOC108436926,LOC107749412,LOC107558139 coding upstream 381657 33463282 ~ 33470308 (+)
nop56 nop56,LOC107661748 coding upstream 441532 33401338 ~ 33410433 (+)
LOC103034246 LOC108278657,LOC108437744,LOC106565181 coding upstream 453518 33386247 ~ 33398447 (+)
LOC111188203 NA coding downstream 615264 34475350 ~ 34476683 (+)
LOC103023802 LOC108438099,LOC107741960 coding downstream 641496 34501582 ~ 34526554 (+)
LOC103036996 rxra coding downstream 990905 34850991 ~ 35134718 (+)
LOC103032475 brd3,brd3a coding downstream 1293838 35153924 ~ 35163028 (+)
LOC103029836 NA coding downstream 1667335 35527421 ~ 35536244 (+)
LOC103037053 NA non-coding upstream 39741 33806116 ~ 33812224 (+)
G126834 NA non-coding upstream 169003 33681112 ~ 33682962 (+)
G126798 NA non-coding upstream 316721 33532111 ~ 33535244 (+)
G126777 NA non-coding upstream 401638 33425273 ~ 33450327 (+)
G126784 ubap2 non-coding upstream 405846 33426767 ~ 33446119 (+)
G126943 NA non-coding downstream 159727 34019813 ~ 34020034 (+)
G126959 NA non-coding downstream 288981 34149067 ~ 34192055 (+)
G126992 NA non-coding downstream 494611 34354697 ~ 34360466 (+)
G127048 gtf3c4 non-coding downstream 745073 34605159 ~ 34607294 (+)
G127075 gsna,LOC108438059,LOC107708352,LOC107741952 non-coding downstream 907710 34767796 ~ 34775786 (+)
dnajc21 dnajc21 other upstream 343043 33412538 ~ 33508922 (+)
trnam-cau_22 NA other upstream 363844 33488050 ~ 33488121 (+)
G126708 NA other upstream 988509 32862881 ~ 32863456 (+)
G126702 NA other upstream 1018499 32832962 ~ 32833466 (+)
G126632 NA other upstream 1449134 32402190 ~ 32402831 (+)
G126903 lman1,LOC107662211,LOC107739740 other downstream 5418 33865504 ~ 33875369 (+)
LOC103022855 hcn1,LOC108438107,LOC100334297,LOC107085810,LOC107749006,LOC107662227,LOC107701955,LOC107719071 other downstream 230004 34090090 ~ 34286886 (+)
LOC103040215 esm1 other downstream 597895 34457981 ~ 34464996 (+)
LOC103023469 NA other downstream 618540 34478626 ~ 34482387 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 other downstream 858710 34718796 ~ 34756129 (+)

Expression


Co-expression Network