LOC103022855 (hcn1,LOC108438107,LOC100334297,LOC107085810,LOC107749006,LOC107662227,LOC107701955,LOC107719071)


Basic Information

Item Value
gene id LOC103022855
gene name hcn1,LOC108438107,LOC100334297,LOC107085810,LOC107749006,LOC107662227,LOC107701955,LOC107719071
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 34090090 ~ 34286886 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171435
aaatgatctaaaacaaagattgttcaacatagttgttcaggggaaggatacagaaAGTTGTCCTTTGGACAAGttgtcctatatatatatatatatatacatctatacatatacctGTATCGTCGCTGTCGCACAAAAACCTTGttatctgctgttttttttattacttaaatgCGGGTGGCGGCAGATTAAATCTTTACATTCTCTCCAAATCAAAGTTTAGGATAAATTGATTTAATTGAAAtgcggcaaaaaaaaaataaaaatatatatatatatatatatatatatatatattttttttttcatattgactTCCATCCAAATCTTGTAAAACTGCTATTTTGGAaataaaacaaggaaacaagGTTTTTGCCGAACAGTAatgatacatacatacatgcatatgTACTAAAATAAGTGACAAAAAAATGTCCAATTATCATTATCACTAGAGATAAGCTAACCTTAATGCAAATAATGGCATAAAACTGTAGTtagtacaatatttaaaaatatatatatatatatatatatatatatatatagaactgTATTCAAtgagattaaattaaattcagtgaAATTCAATGAAAATCAATGAAATTTTAATGTCATGACCCTGGGGTGAGCTGCTGAAGCTTAAGGGTACAAATAACTAGATTTATGATTATAGTGATGATATAAAATCACTGTAGttgggagtaaaaaaaaaaaaaaaaactttgtgcaAAAGGAAAGCATTATGGAAATGCACGTAAATTTTGTTCTGTTGCAAATGAATTCGCTCTTAAATGCCCCGCCCCATCcataaatttataaatatataaaacaaaatagaaatGCAAAACCCCAAGAAATATGAtgaatattgtacaataagacCTTATATCATCATTACTGTACAACGCACAGTCCTGGAGTGCACCAGCACCAGCGTGTACTCGTGAATAACCTTCTTTTctgcattttctatttatttgtttgtttgtttgtttgtttgtttgttttatggttAAATCAGTATTATGCTTGAGCAGTTGACACATATTGCTATGCAGTAACCCTCCCCCCTCTCCCCCCCAAAAATTGTCTACTTTTCTCGTTGATTCTCACACATCTCATGTTAAAATATGCTCATTCTACATCTCTCAACTTGGaccgccttttttttttttttgccttttttttgtcattattttaacTCATAATTTACAATCATATCAGTTTTTCTATCATTTATCTCATTAATATCGTTCATTTAGTCGTCACTAATTTACAGTCTACAAGAACCAGCATCCACCATCTCAGCATTGTCACACAAGATCACACTCGTTCCCTGTAGAGAAGGAACGGACAGACGAATCCATCTCAGCCACGTTCGCTGGCACTGTGAACAACGAATGAAATAAGTCCAAACTGGGATTACTTGCACTGTATATGGATTCTGTCGTCGCTGTCGCCGCTGTTGTCGTCCTTGTTGTTCATGTTTAAACAGTAAGGATCTGCAAATCACATCTGATTCGGGAATCACCCAAAGTAGAAGCTAATTATCACTGCTTAACGATACAGAGCTGAAATCTCTACTCCAGGTTAGAAATCCAAAAATCTAAGAAACAGAATGAAATCTAAAATTTAAAGCTGTTTTGCATTAAGGTTTCTCTCTTATGTGTATgcttgtatgtatgtgtgtgtgtgtgtgtgtgtgtccgtctgtctgtccgtctgtctgtctgtatgtgtgtataaattCACTCTGTGTGAGGCTTGAAACTCTGCTGGACTGGGTCTGATGTAATTATGGTTGGTAGATAGATAAAGGAGTTTTACGGTTTTaacttgtttaaaatgtttaaatttctATAGTCACatgggtgtactcacactaggtaTCCCAAAAGCACGGTTCGTTTGATTAGTGTGATCGCTCGAAACTGTTCAGATGTCATTTAACAAGATTTAACAAGACTTTCCTGTAAACAAGCAtgccggtgttgtgctgaattcagcggCCCCGCCAGAAAAAGCGCCACCTCCCAGGAACATGGATTATTTTGCTATGTATGTAAACCTGACTGAGATAACCGAGATAGACTTTTGGCGTGTATTACTAAGTAAGTTAAAGCAGattatctctgcttttatcaaAAAGACAGAGCAAACGCACTCccaagagagggtgcttttcacgGCGGGGATGCTAAACTTGCCGCAACACCGGCAATCCCACTGAGCTGTGAGTGACGCAAGTGTGCTCGGGCACGGAGTACACCCTCTACACCCTAAAATCAGTGCCCTGTTCCCATTCCCTTTATGGGAAAATCCAGATTACATTAATTTATAGTGCACTTCTATGTAATCTTGGGGAACAAAATTTGAAAATGTAGTGAAACGATTTATATCCAACAGAGAACATCATTTGTACACTATAGCTGAGCTTTCAGAGCCCTTGCTGCATTTCTCAGCTGTCATAGAAAGTTGTTTCAGACTAAAAGAGACAATTCTCTGTGCACCAATAGAAAACAGCAGCTTTCACCGGTTTCAACTAAGTGTTTAAACTGGTTATTCAATGTAAAGTTCCACTTTgcttctacactgtaaactcaatgaaggcagccTGAGACACATCAGCTAGTCTGACTCCTCCCCCTATTCTCTCTCTTGCATTGACTAACTGAAATAGACTAACTTAATTTCTACATAAAGAACATAAAACAACCAAACAATGGATTTTCATCTTTTCTACAATGATTGGCTTCAACAGCTATAACTAAACCAGACAACAGACAAAAGCACAAAAGCTGCGTAGCTGCTTAGCTTATAGCTTAACCTAACTTAACTTTTCAAATGATAAAGCCAACATACAGGTTCTCTGTGTGCCCTTTAAGTTGGCATGAATTAACAATAAGCcttaaaaagaatttaaaagtATACCAAGGACAAAAGCAAGGCAATGTGCCCAAAACAACCCCTTaaaaccatcaaaccatcaaaaaTATCGAGCCCCTTTCACAATAAGTATTTTttctggatttaaaaaaaacgtaagtcacactgtacttttacttttactctggGTCTGaccctattttttttgttgttctttaaACAGGATTAGAACCTAAATAGCCTTCAAAAATGTtcactctttccttttctcagCTCGCTTGTCTGCTGAtttcctttacatttttctacacgagtgaaagagaaaagggAAATAAATGCTGCTAAAATTAACtacaaatacaagttatataaTTCCCCAGATTCttcattcttctttttctactggTCAATGATGCGATTTGACAAACGTACTATGTAATTAAGCATTATCAGATTTGAACTGCAATGTTTTACTTGCATTTGATTCTTGAAGATTGCAAAATGTCACTTTTGCAATTTCACAATTAGTGTAACTTTGGCttaagtgtgtgttttggtgaagAAAGCAATGAATTGTGAtgcaaaaaaagcaatttaCCAACCTGACATTTCAGACCCAGAACAGAGCAGAGTTTCAACCCCTTCAGATCGCACTTACAGAAAACGACCGTACTTCAGAACCCCACCCGCGTCAATATTGTACTGATACAGCCCCCGGCCACCTCCTCACACGAGCATGCATCGTCACAAATACTTAAAAGAGATACTACTTAAAATGTTGTGTTGTGGGATTCTTTTCTGGATCGTTCGTTTGTTTCTGTTCTCTGTCTGCGTAGACGTTacctgtgtgtgtatcagaagCATCGGACTTTCACGAAAAAGGACATTCTTAAGTATTTGTGCCTAAACTATAGCCATATTTCACcctgttcatttgttttttttttcttgtttgttgttttcttgtttttgttgttcttgCGTTGGAGCGTTGGTTGTGTGCACGCATGCGGTCATGCATGCACGAGTTcagagtgagtagagtgtgtatctgttctgtgttttctgaggatgatgattataatgatgattataatgaggatgatgatgatgttagTGATGAAGATGGCCAAATGCGTCAGAGGAATCAAGAATCAGAGATCAAATTAAAAGAGACCAAGATTAAAGAGACAAAAACCAGGAACTATGGGGACGGTTTTCCCAGACTGGGATTAAACCTGGTCTCAAGTCTAGAATTTCCATTCAGAATGCTGGTTTTAATCCCTGTGCTGGGAAACTTACCCTATATGTTCAGTTTTAACTAAAGCTCTAAAGGGTCTGGATTAGTTTTCCCACAGGATCAGGATGTTGTGTAATGGTattagaaaattatatatatagaatttgaaaccacttgagtttctgaatcagtttctctgattttgctatttatagatatatgtttgagtaaaattaacattgttgttttattctataaactacagacaacatttttcccaaattccccccaaaaatagtgtcatttaaagcattcatttacagaaaattaaaaaatttttttcattaaatcaaTCGTAAATAATTGTCAAACTATttctgtaacttttttttaaataataaattgaaattatgtatttgtttacaTTGGATTACTGGAAAGTTCAGCTCCACagcagtaaagtaaaagtaaattaccCTCACTAactaattgttttttgtttttttatgactataaaacaacaacacttttagtacatttatgtaaaattaattaGTAGCCAAAAcatcatagtaaaaacaaactgATTTAGATTACACAAAATtgagggcgccgagtggtccagtgatcaaaagcgctgccactatgattgggggggattactggttcgaatcccggccatgcagcttgccatcagctgccggagccttgagagagcacaactggccttgctctctctgtgatGGTACTCGGTAATGCTCATCATCAGCAGATAGTCTGAATTTAAATGTGTCAAAGGAGGCTaatgatgggggatatacagcagAGTAACAGGagaaaaatggaataaaataaaataaaaaaaaattacacatcaACAAGGAAGAGTAATCCAGGAACTAACTACAATAGagcttaataaattattaaaactacGTGACCTGCAGACGGACTGTAGATCTGAGGACTGAGAACTGGATGCATTGATGGCTTGAATAGTATGGCATGATAGGGAAATCCAGAGCACCTTTGTAACTGTCTTTATAGCCACTGATGATGTTTGTTTGGATATGTTGTTGTGTGGAGTGAAACTGGCCAAAGCGAAACATTCTGAGAAACTTTACGTGTTTGAAATTGCACTTTccgataattaataataaatagagagatagaacgagagagagagagagatagatagaaagagagagagtctatAGATGCAGACACAGACTTCCAGTTAGCTGAAGCTGAAGTTGATAAGGTACTGTGGAGATAAGTCTCCTGCCCTTTTTAACGGAGGGTCCTGAGAGTAACCATGCTTTTTCAATTCCAGCATAGTGCTATGCCATAGTGTATAGAGTCTCGTATACAGTTACGACGGTCAGCAGAACGCTGTGTGTCTGCTATTTTTGATACTGTACTTGCCTTCGGAAGAGAACGCTTCCTGATTTAATGTGCTTTTTGCTCTCAGCTCTGAAACCCAGCTCGCTTTCTGGAGGGATGCACGCTAATACGGCGCTAATTACGAGTTCGCAGTCATTCGGTATGGAGGCATTCAAGAAACCAGCACATATATttgtatcttcttttttttgttgtttttttttttttgttaatgttgtTTTCCCTTGGTTTTTGGTTCTGTGTGAATGATAATAAACGATGcaaaagagaacaaagaaaCAATGCTTCGAATAAAAgggaagtttaaaaaaataaaataattataaaataaaaaaaaaagcaattttggTTTACAGTCTCCCGGATGCAGGCGAGATTTATGGTTTCATAAGTTTACCCACACTCTGCATGAACGGAGAGAAGGGAACAACGCTAGAAAAAGCCACAAGCTCTTCTTAAAGTCAGCTGATCTGTTCATTGTGCTCATACATGTAAAC
>XM_022676548.1
TCAGTGCTCTGCAGCGCGAGCGCGCggctcctccacctccaccaccaccagcagcacgAGCAGCATCAtcagtagcagtagcagcagcactggcttcagcagcagcagcggcagcgcgCGGAGGCCAATGGTAAGCGCGCGCCGCTGCTTCGCCTTCGTGTCCGCACCCGCGAGCTTATGGGCACATGGAGGAGGGCATGATGAAGTCCAACTCGTTCTCCAGCAACAGGGAGGAGAAGGCGGAGGCGGACGGCCGGAACAGCGTGTTTCAGCGGCAGGACTCGGCGCTGCTGAAGAAGAACAGCAccggaggaggaggcggtggaggaggcggaggaggCGGTGGCAGCAGTGGCAGTAACGCCGCCAACGCCGCCGCCTCCGCCGGCAAGGAGCACGCCAACTCCGTGGCGGTGAAGACGGACCGCGAGGAGACCATGCTGGGGCTGGAGGACGCCGACCCCGCGGGCCGGTCGCACGGCTTCATGCAGCGGCAGATCGGGGCCATGCTGCAGCCCGGAGTCAACAAGTTCTCCCTGCGCATGTTCGGCAGCCAGAAGGCGGTGGAGAAGGAGCAGGAGCGCGTGCAGACCGCGGGCTACTGGATCATCCACCCCTACAGCGACTTCAGGTTCTACTGGGACTTGATAATGCTCATCATGATGATGGGGAATCTAATCATCATTCCTGTTGGAATAACCTTCTTTTCTGAGCAAACCACCACCACCTGGCTGGTGTTTAACGTGGCCTCGGACACCATCTTCCTGGTGGACCTGGTCATGAACTTTCGCACGGGCATTGTGAACGAGGAGAGCTCCGAGATCATCCTGGACCCTAAGGTCATTAAGATGAACTACCTGAAGAGCTGGTTTGTGGTGGATTTCCTCTCCTCCATCCCCGTGGATTATATCTTTCTGATTGTCGAGAAAGGCTTTGACTCGGAGGTGTACAAAACGGCCCGAGCGCTGCGAATCGTCCGCTTCACCAAAATCCTCAGCCTGCTCCGCCTGCTGCGGCTGTCCCGCCTCATCAGATACATCCACCAGTGGGAGGAGATTTTCCACATGACCTATGACCTGGCGAGTGCAGTGGTACGAATCTTTAATCTGATTGGTatgatgctgctgctgtgtcACTGGGACGGCTGCCTGCAGTTCCTGGTGCCTCTGCTCCAGGATTTCCCTCCGGATTGCTGGGTGTCGTTAAACGGTATGGTTaaCGACTCCTGGGGAAAGCAGTACTCGTACGCCCTCTTTAAAGCCATGAGTCACATGCTGTGTATCGGTTATGGAGCTCGAGCGCCCGTCAGCATGTCCGATCTGTGGATCACCATGCTCAGCATGATCGTGGGGGCCACCTGCTACGCCATGTTCGTGGGCCACGCCACCGCCCTCATCCAGTCCCTGGACTCCTCGCGACGCCAGTATCAAGAGAAGtatAAACAAGTGGAGCAGTACATGTCCTTCCACAAGCTCCCAGCCGACATGCGGCAGAAGATCCACGACTATTACGAGCATCGCTACCAGGGCAAGATCTTCGATGAGGATAACATCCTGAACGAGCTCAACGACCCTTTAAAAGAGgAGATCGTTAACTTCAACTGCCGTAAGCTGGTGGCCACCATGCCTCTGTTCGCCAACGCCGACCCCAACTTTGTGACGGGAATGCTGAGCAAGCTCAAGTTCGAGGTGTTCCAGCCCAACGATTACATCATCCGCGAGGGAACTGTGGGTAAAAAGATGTACTTCATCCAGCACGGCGTCGCCAGCGTCATCACCAAGCACAACAAGGAGATGAAGCTCACAGACGGCTCCTATTTCGGAgAAATCTGTCTACTAACGAAAGGCCGGCGCACGGCCAGCGTCCGCGCCGACACGTACTGCCGCCTCTTCTCCCTGTCTGTCGACCACTTCAACGAGGTCCTGGAGGAATACCCCATGATGCGGCGCGCGTTCGAGACGGTGGCTATTGACCGCCTGGACCGCATCGGGAAGAAGAACTCGCTTCTACTGCAGAAGTTCCAGAAGGATCTGAACGCTGGCGTGTTCAACACGCAGGAGAACGAGCTGCTGAAGCAGATCATCCGGCAGGACCGGGAGATGGTTATGATGGTCGAAAGGAAGCAGTCGGTAACGGGGGCCAACTCGACACCGATGTCTGGAAACTCCATCATTAACTCTCCTGCTCAGCCGCCGTTCATTAACTTCGCCAACAGCCAGTTCCAGCAAGCCGCCCCCATGACCTACAGCACCGCCGCGTCCATCACCCCGGCCGCCCGCATAGCTCAGGGCGTCCTGTTCTCCGCATCCGGCATTTCACCTGGAAACCTGGGTACCTCCTCCCCGAACCCGCAGACCCCACTGCAGCAGCCGAGCGGCATCAAGTCGCCCTGTTCCTTCACGGCGGCCGTTTGCAGCCCTCCGGTCCAGACGCCTTTATCCAGCCGAACGTTCCAGTACGGCTCGCCCACCGCCTCCCAGCTTTCCCTGGTACAGCCGACCATTCCTCAGCAGTCCttagcagcacagcagcagcagcagcaacaacaacagcagctgcCATCTTCCCAACAGCCTCAGCCTCAACAGGCTTCTCCCCAAAGAAGCGAAATCCACAAAAGCACGCAGGCGCTCCAGTCCGGAAGCCTTAGCCGAGACATTCGCCACCTCTCAGCCTCCCAGCCCTCTTTACCCCACGAAACCTCGCTAGCCGTCCGGCCGCACCCATCCTCCGGCGAATCTCTGGCCGCCATCCAGCCCCCTGCAGCCACAGCCCAGGTCCAGGCCCAAATCCAGGCCCAAGTTCCGGTGGTCCAGGCCGTCCCTCAAAGCGGCATCCGCACCACTGTCCCTCAGAGGGTGGCGCTCTTCCGCCAGATGTCGTCGGGATCTTTACCGCCGGTGCGCGCCGCGCCCTCTAGCCTCCAGCACAGGGATTCCACGGCGTCCAGACGAGAATCGGCGGTCTTGAGCAGTACAGAGACCGATCAAGACAAGATGCGATTCGCATCGAATTTATGATCCcgtttcctttgtttttttttccttttattttttaattctgcttcatttttatggagaaaatgggaaagagagactgaagaagtatttttttttgttttttctccaaCTCCTCTCTAAAAGATAACCTCATAGATGATCCTGTACAGACTGCCcttgtattatattttagacatttccCCTTCAACTTAAGAATGtatattatacaaatatatatgtgtaaatcCAACTAGAATATTTGGCATTGACTATATGAAAAAGACACAGTAACAGAAACAGTAGTAGAAATGCAAGTCTTCCTTTCTCATATATATGACCAAACACGTCAAAGaggattttctctttttttttttttttttttttttcttctctcctttCCATTGATTtcgatagattttttttttattgtaactggAATGCAATGTGAAACCAGACGGTGACgttatgaatttatttatttattctttacttGGAGAAGATAGAAGATGACAACAACATGAGTCCAGCATTCAGCAGCTTTTGGCATCACtgtggaaaataataataaaaaaaaaaaaaaacctgcacgCAAACAATACTGGAAACCactgaaaatacaaaaaaaaaaaaagcacattcataaaaacacaatacCAGTGGAAGACAAAATTCATGGGAGAAGTTTGAAGGACCACAATAATGGGCAATAATGcgggtaaaaaaatatataggctgAATTACCCTCTGCAATACTTTCTGAAGTGCAGTCACTGGTGTAGTGTTAAGACCGTGGCAGTGTTATGGGTCCTAAGGGAATAAATCTTGcatttgctgctttttttttgttctttttctttttatttctctctcttttttttgttttttttccgttTCGTTTTTATAGAGCGAGTGTGGTTGCAGTTGGATGTCGTTGGATAATATTATTTTCTACTCCTAATTTCTGACTGAGATGGACACAATGAAATGTCGTTTAATGACTATAtgtacatttataatatttataaactaAAGATTATCACCATTATGCAATAGACTGTGATATAAAGATAAACTATATGTGTGTTGTAAATAGTTTTGTAGATCTAGTATTTACAGAATAATGTGTGGTGCATTCTCAAATCATGGCAATGTCTTACTTCTGTCTGAAGCCTGGATatcacctatatatatataatatatatacatacatatacctGTATCGTCGCTGTCGCACAAAAACCTTGttatctgctgttttttttattacttaaatgCGGGTGGCGGCAGATTAAATCTTTACATTCTCTCCAAATCAAAGTTTAGGATAAATTGATTTAATTGAAAtgcggcaaaaaaaaaataaaaatatatatatatatatatatatatatatatattttttttttcatattgactTCCATCCAAATCTTGTAAAACTGCTATTTTGGAaataaaacaaggaaacaagGTTTTTGCCGAACAGTAatgatacatacatacatgcatatgTACTAAAATAAGTGACAAAAAAATGTCCAATTATCATTATCACTAGAGATAAGCTAACCTTAATGCAAATAATGGCATAAAACTGTAGTtagtacaatatttaaaaaaaaatatatatatatatatatatctgtctataaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagaactgTATTCAAtgagattaaattaaattcagtgaAATTCAATGAAAATCAATGAAATTTTAATGTCATGACCCTGGGGTGAGCTGCTGAAGCTTAAGGGTACAAATAACTAGATTTATGATTATAGTGATGATATAAAATCACTGTAGttgggagtaaaaaaaaaaaaaaaaactttgtgcaAAAGGAAAGCATTATGGAAATGCACGTAAATTTTGTTCTGTTGCAAATGAATTCGCTCTTAAATGCCCCGCCCCATCcataaatttataaatatataaaacaaaatagaaatGCAAAACCCCAAGAAATATGAtgaatattgtacaataagacCTTATATCATCATTACTGTACAACGCACAGTCCTGGAGTGCACCAGCACCAGCGTGTACTCGTGAATAACCTTCTTTTctgcattttctatttatttgtttgtttgtttgtttgtttgtttgttttatggttAAATCAGTATTATGCTTGAGCAGTTGACACATATTGCTATGCAGTAACCCTCCCCCCTCTCCCCCCCAAAAATTGTCTACTTTTCTCGTTGATTCTCACACATCTCATGTTAAAATATGCTCATTCTACATCTCTCAACTTGGaccgccttttttttttttttgccttttttttgtcattattttaacTCATAATTTACAATCATATCAGTTTTTCTATCATTTATCTCATTAATATCGTTCATTTAGTCGTCACTAATTTACAGTCTACAAGAACCAGCATCCACCATCTCAGCATTGTCACACAAGATCACACTCGTTCCCTGTAGAGAAGGAACGGACAGACGAATCCATCTCAGCCACGTTCGCTGGCACTGTGAACAACGAATGAAATAAGTCCAAACTGGGATTACTTGCACTGTATATGGATTCTGTCGTCGCTGTCGCCGCTGTTGTCGTCCTTGTTGTTCATGTTTAAACAGTAAGGATCTGCAAATCACATCTGATTCGGGAATCACCCAAAGTAGAAGCTAATTATCACTGCTTAACGATACAGAGCTGAAATCTCTACTCCAGGTTAGAAATCCAAAAATCTAAGAAACAGAATGAAATCTAAAATTTAAAGCTGTTTTGCATTAAGGTTTCTCTCTTATGTGTATgcttgtatgtatgtgtgtgtgtgtgtgtgtgtgtccgtctgtctgtccgtctgtctgtctgtatgtgtgtataaattCACTCTGTGTGAGGCTTGAAACTCTGCTGGACTGGGTCTGATGTAATTATGGTTGGTAGATAGATAAAGGAGTTTTACGGTTTTaacttgtttaaaatgtttaaatttctATAGTCACatgggtgtactcacactaggtaTCCCAAAAGCACGGTTCGTTTGATTAGTGTGATCGCTCGAAACTGTTCAGATGTCATTTAACAAGATTTAACAAGACTTTCCTGTAAACAAGCAtgccggtgttgtgctgaattcagcggCCCCGCCAGAAAAAGCGCCACCTCCCAGGAACATGGATTATTTTGCTATGTATGTAAACCTGACTGAGATAACCGAGATAGACTTTTGGCGTGTATTACTAAGTAAGTTAAAGCAGattatctctgcttttatcaaAAAGACAGAGCAAACGCACTCccaagagagggtg
>XM_022676550.1
TCTCTCAGTGCTCTGCAGCGCGAGCGCGCggctcctccacctccaccaccaccagcagcacgAGCAGCATCAtcagtagcagtagcagcagcactggcttcagcagcagcagcggcagcgcgCGGAGGCCAATGGTAAGCGCGCGCCGCTGCTTCGCCTTCGTGTCCGCACCCGCGAGCTTATGGGCACATGGAGGAGGGCATGATGAAGTCCAACTCGTTCTCCAGCAACAGGGAGGAGAAGGCGGAGGCGGACGGCCGGAACAGCGTGTTTCAGCGGCAGGACTCGGCGCTGCTGAAGAAGAACAGCAccggaggaggaggcggtggaggaggcggaggaggCGGTGGCAGCAGTGGCAGTAACGCCGCCAACGCCGCCGCCTCCGCCGGCAAGGAGCACGCCAACTCCGTGGCGGTGAAGACGGACCGCGAGGAGACCATGCTGGGGCTGGAGGACGCCGACCCCGCGGGCCGGTCGCACGGCTTCATGCAGCGGCAGATCGGGGCCATGCTGCAGCCCGGAGTCAACAAGTTCTCCCTGCGCATGTTCGGCAGCCAGAAGGCGGTGGAGAAGGAGCAGGAGCGCGTGCAGACCGCGGGCTACTGGATCATCCACCCCTACAGCGACTTCAGGTTCTACTGGGACTTGATAATGCTCATCATGATGATGGGGAATCTAATCATCATTCCTGTTGGAATAACCTTCTTTTCTGAGCAAACCACCACCACCTGGCTGGTGTTTAACGTGGCCTCGGACACCATCTTCCTGGTGGACCTGGTCATGAACTTTCGCACGGGCATTGTGAACGAGGAGAGCTCCGAGATCATCCTGGACCCTAAGGTCATTAAGATGAACTACCTGAAGAGCTGGTTTGTGGTGGATTTCCTCTCCTCCATCCCCGTGGATTATATCTTTCTGATTGTCGAGAAAGGCTTTGACTCGGAGGTGTACAAAACGGCCCGAGCGCTGCGAATCGTCCGCTTCACCAAAATCCTCAGCCTGCTCCGCCTGCTGCGGCTGTCCCGCCTCATCAGATACATCCACCAGTGGGAGGAGATTTTCCACATGACCTATGACCTGGCGAGTGCAGTGGTACGAATCTTTAATCTGATTGGTatgatgctgctgctgtgtcACTGGGACGGCTGCCTGCAGTTCCTGGTGCCTCTGCTCCAGGATTTCCCTCCGGATTGCTGGGTGTCGTTAAACGGTATGGTTaaCGACTCCTGGGGAAAGCAGTACTCGTACGCCCTCTTTAAAGCCATGAGTCACATGCTGTGTATCGGTTATGGAGCTCGAGCGCCCGTCAGCATGTCCGATCTGTGGATCACCATGCTCAGCATGATCGTGGGGGCCACCTGCTACGCCATGTTCGTGGGCCACGCCACCGCCCTCATCCAGTCCCTGGACTCCTCGCGACGCCAGTATCAAGAGAAGtatAAACAAGTGGAGCAGTACATGTCCTTCCACAAGCTCCCAGCCGACATGCGGCAGAAGATCCACGACTATTACGAGCATCGCTACCAGGGCAAGATCTTCGATGAGGATAACATCCTGAACGAGCTCAACGACCCTTTAAAAGAGgAGATCGTTAACTTCAACTGCCGTAAGCTGGTGGCCACCATGCCTCTGTTCGCCAACGCCGACCCCAACTTTGTGACGGGAATGCTGAGCAAGCTCAAGTTCGAGGTGTTCCAGCCCAACGATTACATCATCCGCGAGGGAACTGTGGGTAAAAAGATGTACTTCATCCAGCACGGCGTCGCCAGCGTCATCACCAAGCACAACAAGGAGATGAAGCTCACAGACGGCTCCTATTTCGGAgAAATCTGTCTACTAACGAAAGGCCGGCGCACGGCCAGCGTCCGCGCCGACACGTACTGCCGCCTCTTCTCCCTGTCTGTCGACCACTTCAACGAGGTCCTGGAGGAATACCCCATGATGCGGCGCGCGTTCGAGACGGTGGCTATTGACCGCCTGGACCGCATCGCAAATAAGACAAAAGCCGATGCTAAGCCAGTTCACTGTGACCAGTCAATGCGAAGAGTTCCTCTTGAGATGAGCTCATCTCGTTTTCAAGAGTGTCCTGGCCGAAGAGTAGGCAGCAGGGAAGAAGAACTCGCTTCTACTGCAGAAGTTCCAGAAGGATCTGAACGCTGGCGTGTTCAACACGCAGGAGAACGAGCTGCTGAAGCAGATCATCCGGCAGGACCGGGAGATGGTTATGATGGTCGAAAGGAAGCAGTCGGTAACGGGGGCCAACTCGACACCGATGTCTGGAAACTCCATCATTAACTCTCCTGCTCAGCCGCCGTTCATTAACTTCGCCAACAGCCAGTTCCAGCAAGCCGCCCCCATGACCTACAGCACCGCCGCGTCCATCACCCCGGC
>XM_022676551.1
TCTCAGTGCTCTGCAGCGCGAGCGCGCggctcctccacctccaccaccaccagcagcacgAGCAGCATCAtcagtagcagtagcagcagcactggcttcagcagcagcagcggcagcgcgCGGAGGCCAATGGTAAGCGCGCGCCGCTGCTTCGCCTTCGTGTCCGCACCCGCGAGCTTATGGGCACATGGAGGAGGGCATGATGAAGTCCAACTCGTTCTCCAGCAACAGGGAGGAGAAGGCGGAGGCGGACGGCCGGAACAGCGTGTTTCAGCGGCAGGACTCGGCGCTGCTGAAGAAGAACAGCAccggaggaggaggcggtggaggaggcggaggaggCGGTGGCAGCAGTGGCAGTAACGCCGCCAACGCCGCCGCCTCCGCCGGCAAGGAGCACGCCAACTCCGTGGCGGTGAAGACGGACCGCGAGGAGACCATGCTGGGGCTGGAGGACGCCGACCCCGCGGGCCGGTCGCACGGCTTCATGCAGCGGCAGATCGGGGCCATGCTGCAGCCCGGAGTCAACAAGTTCTCCCTGCGCATGTTCGGCAGCCAGAAGGCGGTGGAGAAGGAGCAGGAGCGCGTGCAGACCGCGGGCTACTGGATCATCCACCCCTACAGCGACTTCAGGTTCTACTGGGACTTGATAATGCTCATCATGATGATGGGGAATCTAATCATCATTCCTGTTGGAATAACCTTCTTTTCTGAGCAAACCACCACCACCTGGCTGGTGTTTAACGTGGCCTCGGACACCATCTTCCTGGTGGACCTGGTCATGAACTTTCGCACGGGCATTGTGAACGAGGAGAGCTCCGAGATCATCCTGGACCCTAAGGTCATTAAGATGAACTACCTGAAGAGCTGGTTTGTGGTGGATTTCCTCTCCTCCATCCCCGTGGATTATATCTTTCTGATTGTCGAGAAAGGCTTTGACTCGGAGGTGTACAAAACGGCCCGAGCGCTGCGAATCGTCCGCTTCACCAAAATCCTCAGCCTGCTCCGCCTGCTGCGGCTGTCCCGCCTCATCAGATACATCCACCAGTGGGAGGAGATTTTCCACATGACCTATGACCTGGCGAGTGCAGTGGTACGAATCTTTAATCTGATTGGTatgatgctgctgctgtgtcACTGGGACGGCTGCCTGCAGTTCCTGGTGCCTCTGCTCCAGGATTTCCCTCCGGATTGCTGGGTGTCGTTAAACGGTATGGTTaaCGACTCCTGGGGAAAGCAGTACTCGTACGCCCTCTTTAAAGCCATGAGTCACATGCTGTGTATCGGTTATGGAGCTCGAGCGCCCGTCAGCATGTCCGATCTGTGGATCACCATGCTCAGCATGATCGTGGGGGCCACCTGCTACGCCATGTTCGTGGGCCACGCCACCGCCCTCATCCAGTCCCTGGACTCCTCGCGACGCCAGTATCAAGAGAAGtatAAACAAGTGGAGCAGTACATGTCCTTCCACAAGCTCCCAGCCGACATGCGGCAGAAGATCCACGACTATTACGAGCATCGCTACCAGGGCAAGATCTTCGATGAGGATAACATCCTGAACGAGCTCAACGACCCTTTAAAAGAGgAGATCGTTAACTTCAACTGCCGTAAGCTGGTGGCCACCATGCCTCTGTTCGCCAACGCCGACCCCAACTTTGTGACGGGAATGCTGAGCAAGCTCAAGTTCGAGGTGTTCCAGCCCAACGATTACATCATCCGCGAGGGAACTGTGGGTAAAAAGATGTACTTCATCCAGCACGGCGTCGCCAGCGTCATCACCAAGCACAACAAGGAGATGAAGCTCACAGACGGCTCCTATTTCGGAgAAATCTGTCTACTAACGAAAGGCCGGCGCACGGCCAGCGTCCGCGCCGACACGTACTGCCGCCTCTTCTCCCTGTCTGTCGACCACTTCAACGAGGTCCTGGAGGAATACCCCATGATGCGGCGCGCGTTCGAGACGGTGGCTATTGACCGCCTGGACCGCATCGGAGTTCCTCTTGAGATGAGCTCATCTCGTTTTCAAGAGTGTCCTGGCCGAAGAGTAGGCAGCAGGGAAGAAGAACTCGCTTCTACTGCAGAAGTTCCAGAAGGATCTGAACGCTGGCGTGTTCAACACGCAGGAGAACGAGCTGCTGAAGCAGATCATCCGGCAGGACCGGGAGATGGTTATGATGGTCGAAAGGAAGCAGTCGGTAACGGGGGCCAACTCGACACCGATGTCTGGAAACTCCATCATTAACTCTCCTGCTCAGCCGCCGTTCATTAACTTCGCCAACAGCCAGTTCCAGCAAGCCGCCCCCATGACCTACAGCACCGCCGCGTCCATCACCCCGGC
>XM_022676552.1
TCTCAGTGCTCTGCAGCGCGAGCGCGCggctcctccacctccaccaccaccagcagcacgAGCAGCATCAtcagtagcagtagcagcagcactggcttcagcagcagcagcggcagcgcgCGGAGGCCAATGGTAAGCGCGCGCCGCTGCTTCGCCTTCGTGTCCGCACCCGCGAGCTTATGGGCACATGGAGGAGGGCATGATGAAGTCCAACTCGTTCTCCAGCAACAGGGAGGAGAAGGCGGAGGCGGACGGCCGGAACAGCGTGTTTCAGCGGCAGGACTCGGCGCTGCTGAAGAAGAACAGCAccggaggaggaggcggtggaggaggcggaggaggCGGTGGCAGCAGTGGCAGTAACGCCGCCAACGCCGCCGCCTCCGCCGGCAAGGAGCACGCCAACTCCGTGGCGGTGAAGACGGACCGCGAGGAGACCATGCTGGGGCTGGAGGACGCCGACCCCGCGGGCCGGTCGCACGGCTTCATGCAGCGGCAGATCGGGGCCATGCTGCAGCCCGGAGTCAACAAGTTCTCCCTGCGCATGTTCGGCAGCCAGAAGGCGGTGGAGAAGGAGCAGGAGCGCGTGCAGACCGCGGGCTACTGGATCATCCACCCCTACAGCGACTTCAGGTTCTACTGGGACTTGATAATGCTCATCATGATGATGGGGAATCTAATCATCATTCCTGTTGGAATAACCTTCTTTTCTGAGCAAACCACCACCACCTGGCTGGTGTTTAACGTGGCCTCGGACACCATCTTCCTGGTGGACCTGGTCATGAACTTTCGCACGGGCATTGTGAACGAGGAGAGCTCCGAGATCATCCTGGACCCTAAGGTCATTAAGATGAACTACCTGAAGAGCTGGTTTGTGGTGGATTTCCTCTCCTCCATCCCCGTGGATTATATCTTTCTGATTGTCGAGAAAGGCTTTGACTCGGAGGTGTACAAAACGGCCCGAGCGCTGCGAATCGTCCGCTTCACCAAAATCCTCAGCCTGCTCCGCCTGCTGCGGCTGTCCCGCCTCATCAGATACATCCACCAGTGGGAGGAGATTTTCCACATGACCTATGACCTGGCGAGTGCAGTGGTACGAATCTTTAATCTGATTGGTatgatgctgctgctgtgtcACTGGGACGGCTGCCTGCAGTTCCTGGTGCCTCTGCTCCAGGATTTCCCTCCGGATTGCTGGGTGTCGTTAAACGGTATGGTTaaCGACTCCTGGGGAAAGCAGTACTCGTACGCCCTCTTTAAAGCCATGAGTCACATGCTGTGTATCGGTTATGGAGCTCGAGCGCCCGTCAGCATGTCCGATCTGTGGATCACCATGCTCAGCATGATCGTGGGGGCCACCTGCTACGCCATGTTCGTGGGCCACGCCACCGCCCTCATCCAGTCCCTGGACTCCTCGCGACGCCAGTATCAAGAGAAGtatAAACAAGTGGAGCAGTACATGTCCTTCCACAAGCTCCCAGCCGACATGCGGCAGAAGATCCACGACTATTACGAGCATCGCTACCAGGGCAAGATCTTCGATGAGGATAACATCCTGAACGAGCTCAACGACCCTTTAAAAGAGgAGATCGTTAACTTCAACTGCCGTAAGCTGGTGGCCACCATGCCTCTGTTCGCCAACGCCGACCCCAACTTTGTGACGGGAATGCTGAGCAAGCTCAAGTTCGAGGTGTTCCAGCCCAACGATTACATCATCCGCGAGGGAACTGTGGGTAAAAAGATGTACTTCATCCAGCACGGCGTCGCCAGCGTCATCACCAAGCACAACAAGGAGATGAAGCTCACAGACGGCTCCTATTTCGGAgAAATCTGTCTACTAACGAAAGGCCGGCGCACGGCCAGCGTCCGCGCCGACACGTACTGCCGCCTCTTCTCCCTGTCTGTCGACCACTTCAACGAGGTCCTGGAGGAATACCCCATGATGCGGCGCGCGTTCGAGACGGTGGCTATTGACCGCCTGGACCGCATCGAGTTCACCATGCCTCCGCAAATGTTTATAAACCTGATGGAAGAAGAACTCGCTTCTACTGCAGAAGTTCCAGAAGGATCTGAACGCTGGCGTGTTCAACACGCAGGAGAACGAGCTGCTGAAGCAGATCATCCGGCAGGACCGGGAGATGGTTATGATGGTCGAAAGGAAGCAGTCGGTAACGGGGGCCAACTCGACACCGATGTCTGGAAACTCCATCATTAACTCTCCTGCTCAGCCGCCGTTCATTAACTTCGCCAACAGCCAGTTCCAGCAAGCCGCCCCCATGACCTACAGCACCGCCGCGTCCATCACCCCGGC

Function

symbol description
hcn1 Predicted to enable cAMP binding activity; sodium channel activity; and voltage-gated potassium channel activity. Acts upstream of or within neuron-neuron synaptic transmission and posterior lateral line neuromast hair cell development. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Is expressed in neuromast hair cell.

NR:

description
PREDICTED: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like isoform X1

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04954 HCN1; hyperpolarization activated cyclic nucleotide-gated potassium channel 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU171435 False 6030 lncRNA 0.36 4 34227538 34286886
XM_022676548.1 True 6341 mRNA 0.45 8 34090094 34283001
XM_022676550.1 False 2394 mRNA 0.58 10 34090090 34278932
XM_022676551.1 False 2338 mRNA 0.58 9 34090092 34278932
XM_022676552.1 False 2311 mRNA 0.58 9 34090092 34278932

Neighbor

gene id symbol gene type direction distance location
grp NA coding upstream 265606 33817577 ~ 33824484 (+)
nedd4l nedd4l,LOC108438193 coding upstream 371502 33584321 ~ 33718588 (+)
LOC103034578 LOC108436926,LOC107749412,LOC107558139 coding upstream 619782 33463282 ~ 33470308 (+)
nop56 nop56,LOC107661748 coding upstream 679657 33401338 ~ 33410433 (+)
LOC103034246 LOC108278657,LOC108437744,LOC106565181 coding upstream 691643 33386247 ~ 33398447 (+)
LOC111188203 NA coding downstream 188464 34475350 ~ 34476683 (+)
LOC103023802 LOC108438099,LOC107741960 coding downstream 214696 34501582 ~ 34526554 (+)
LOC103036996 rxra coding downstream 564105 34850991 ~ 35134718 (+)
LOC103032475 brd3,brd3a coding downstream 867038 35153924 ~ 35163028 (+)
LOC103029836 NA coding downstream 1240535 35527421 ~ 35536244 (+)
G126943 NA non-coding upstream 70056 34019813 ~ 34020034 (+)
G126902 NA non-coding upstream 230004 33851965 ~ 33860086 (+)
LOC103037053 NA non-coding upstream 277866 33806116 ~ 33812224 (+)
G126834 NA non-coding upstream 407128 33681112 ~ 33682962 (+)
G126798 NA non-coding upstream 554846 33532111 ~ 33535244 (+)
G126992 NA non-coding downstream 67811 34354697 ~ 34360466 (+)
G127048 gtf3c4 non-coding downstream 318273 34605159 ~ 34607294 (+)
G127075 gsna,LOC108438059,LOC107708352,LOC107741952 non-coding downstream 480910 34767796 ~ 34775786 (+)
G127077 gsna non-coding downstream 495184 34782070 ~ 34796546 (+)
G127086 NA non-coding downstream 534799 34821685 ~ 34821907 (+)
G126903 lman1,LOC107662211,LOC107739740 other upstream 214721 33865504 ~ 33875369 (+)
dnajc21 dnajc21 other upstream 581168 33412538 ~ 33508922 (+)
trnam-cau_22 NA other upstream 601969 33488050 ~ 33488121 (+)
G126708 NA other upstream 1226634 32862881 ~ 32863456 (+)
G126702 NA other upstream 1256624 32832962 ~ 32833466 (+)
LOC103040215 esm1 other downstream 171095 34457981 ~ 34464996 (+)
LOC103023469 NA other downstream 191740 34478626 ~ 34482387 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 other downstream 431910 34718796 ~ 34756129 (+)
vav2 vav2 other downstream 884630 35171516 ~ 35464602 (+)
G127250 NA other downstream 1189236 35476122 ~ 35492475 (+)

Expression


Co-expression Network