G127109


Basic Information

Item Value
gene id G127109
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 34968673 ~ 34969093 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171630
agcaactgcctagcaacagcttagcaaccacttcagaaatgatagcaactgcctagcaacaaatTGGCAATCAAAAGattaaccaaaagttttacgatttcagcatttaaacaaacgtttttagatttcagcgtttaactaaacgtttttagatttcagcgtttaatcaaacgtttttagatttcagcgtttttaGCATTTAGCGTTTAGCCAAAAGTTAACAGCATATCAATgactcttcacactcttcagacGGAAAaagcttagcaaccattttaactttttaacgttATTAGTgttcttttccaagccaacttaaagttcgttcacgaactttaccttttctagttattattattattatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171630 True 365 lncRNA 0.33 2 34968673 34969093

Neighbor

gene id symbol gene type direction distance location
LOC103023802 LOC108438099,LOC107741960 coding upstream 442119 34501582 ~ 34526554 (+)
LOC111188203 NA coding upstream 491990 34475350 ~ 34476683 (+)
grp NA coding upstream 1144189 33817577 ~ 33824484 (+)
nedd4l nedd4l,LOC108438193 coding upstream 1250085 33584321 ~ 33718588 (+)
LOC103034578 LOC108436926,LOC107749412,LOC107558139 coding upstream 1498365 33463282 ~ 33470308 (+)
LOC103032475 brd3,brd3a coding downstream 184831 35153924 ~ 35163028 (+)
LOC103029836 NA coding downstream 558328 35527421 ~ 35536244 (+)
LOC103030369 LOC103030369 coding downstream 574565 35543658 ~ 35554291 (+)
LOC103029511 NA coding downstream 598962 35568055 ~ 35574704 (+)
pcsk1 pcsk1,LOC107739678 coding downstream 702222 35671315 ~ 35699103 (+)
G127097 NA non-coding upstream 123230 34845169 ~ 34845443 (+)
G127086 NA non-coding upstream 146766 34821685 ~ 34821907 (+)
G127077 gsna non-coding upstream 172127 34782070 ~ 34796546 (+)
G127075 gsna,LOC108438059,LOC107708352,LOC107741952 non-coding upstream 192887 34767796 ~ 34775786 (+)
G127048 gtf3c4 non-coding upstream 361379 34605159 ~ 34607294 (+)
G127122 NA non-coding downstream 124550 35093643 ~ 35094207 (+)
G127152 NA non-coding downstream 327268 35296361 ~ 35327393 (+)
G127188 NA non-coding downstream 445226 35414319 ~ 35414771 (+)
G127264 NA non-coding downstream 586818 35555911 ~ 35636572 (+)
G127268 NA non-coding downstream 609453 35578546 ~ 35581992 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 other upstream 212544 34718796 ~ 34756129 (+)
LOC103023469 NA other upstream 486286 34478626 ~ 34482387 (+)
LOC103040215 esm1 other upstream 503677 34457981 ~ 34464996 (+)
LOC103022855 hcn1,LOC108438107,LOC100334297,LOC107085810,LOC107749006,LOC107662227,LOC107701955,LOC107719071 other upstream 681787 34090090 ~ 34286886 (+)
G126903 lman1,LOC107662211,LOC107739740 other upstream 1093304 33865504 ~ 33875369 (+)
vav2 vav2 other downstream 202423 35171516 ~ 35464602 (+)
G127250 NA other downstream 507029 35476122 ~ 35492475 (+)
glrx glrx,LOC105014469,LOC107661879 other downstream 786251 35755344 ~ 35761112 (+)
ubap1 ubap1 other downstream 859542 35828635 ~ 35838054 (+)
G127359 NA other downstream 965826 35934919 ~ 35943122 (+)

Expression


Co-expression Network