G127122


Basic Information

Item Value
gene id G127122
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 35093643 ~ 35094207 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171643
TATAGAATTACTTACTTATACCAAAAAACATCTTATATACCATAGCATgtacttaacaACACCATGAACTCCATCttaaataccatagcaaccacttactaacaccaaaaaacatcttaaaaatcATAGCAAgtacttaacaacaccataaaACCATCttaaataccatagcaaccacttaccaacaccaaaaaaacatcttaaaaatcATAGCAAgtacttaacaacaccataaaACCATCttaaataccatagcaaccacttactaACACCATGAACTCCATCTTCttaaataccatagcaaccacttactaACACCATAAAACATctcggataccatagcaaccacttactaACACCATAAAACATCtgggatactatagcaaccacttagcaacgccATGAAAAACATCTGgtatactatagcaacaccatgAAATTGAACACCGCCTTGGATACTATGgcaaccacttaaaaacacTATAGCAACAATTGTAagcaccacaacaaccaccaacaacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171643 True 523 lncRNA 0.34 2 35093643 35094207

Neighbor

gene id symbol gene type direction distance location
LOC103023802 LOC108438099,LOC107741960 coding upstream 567089 34501582 ~ 34526554 (+)
LOC111188203 NA coding upstream 616960 34475350 ~ 34476683 (+)
grp NA coding upstream 1269159 33817577 ~ 33824484 (+)
nedd4l nedd4l,LOC108438193 coding upstream 1375055 33584321 ~ 33718588 (+)
LOC103034578 LOC108436926,LOC107749412,LOC107558139 coding upstream 1623335 33463282 ~ 33470308 (+)
LOC103032475 brd3,brd3a coding downstream 59717 35153924 ~ 35163028 (+)
LOC103029836 NA coding downstream 433214 35527421 ~ 35536244 (+)
LOC103030369 LOC103030369 coding downstream 449451 35543658 ~ 35554291 (+)
LOC103029511 NA coding downstream 473848 35568055 ~ 35574704 (+)
pcsk1 pcsk1,LOC107739678 coding downstream 577108 35671315 ~ 35699103 (+)
G127109 NA non-coding upstream 124550 34968673 ~ 34969093 (+)
G127097 NA non-coding upstream 248200 34845169 ~ 34845443 (+)
G127086 NA non-coding upstream 271736 34821685 ~ 34821907 (+)
G127077 gsna non-coding upstream 297097 34782070 ~ 34796546 (+)
G127075 gsna,LOC108438059,LOC107708352,LOC107741952 non-coding upstream 317857 34767796 ~ 34775786 (+)
G127152 NA non-coding downstream 202154 35296361 ~ 35327393 (+)
G127188 NA non-coding downstream 320112 35414319 ~ 35414771 (+)
G127264 NA non-coding downstream 461704 35555911 ~ 35636572 (+)
G127268 NA non-coding downstream 484339 35578546 ~ 35581992 (+)
G127274 NA non-coding downstream 502119 35596326 ~ 35604643 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 other upstream 337514 34718796 ~ 34756129 (+)
LOC103023469 NA other upstream 611256 34478626 ~ 34482387 (+)
LOC103040215 esm1 other upstream 628647 34457981 ~ 34464996 (+)
LOC103022855 hcn1,LOC108438107,LOC100334297,LOC107085810,LOC107749006,LOC107662227,LOC107701955,LOC107719071 other upstream 806757 34090090 ~ 34286886 (+)
G126903 lman1,LOC107662211,LOC107739740 other upstream 1218274 33865504 ~ 33875369 (+)
vav2 vav2 other downstream 77309 35171516 ~ 35464602 (+)
G127250 NA other downstream 381915 35476122 ~ 35492475 (+)
glrx glrx,LOC105014469,LOC107661879 other downstream 661137 35755344 ~ 35761112 (+)
ubap1 ubap1 other downstream 734428 35828635 ~ 35838054 (+)
G127359 NA other downstream 840712 35934919 ~ 35943122 (+)

Expression


Co-expression Network