glrx (glrx,LOC105014469,LOC107661879)


Basic Information

Item Value
gene id glrx
gene name glrx,LOC105014469,LOC107661879
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 35755344 ~ 35761112 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU171960
gcagcagcagcagcagcagcagcagcagcagcatggcTCAGGAGTTTGTGAAAGCTAAGATCCAGGGGGATAAAGTGGTGGTGTTCCTGAAGCCCTCGTGCCCTTACTGCGTTACAGCCAAAGACGTTCTCTCCAAGTACAAGTTCAGAGCTGGACACCTAGAGATGATCGATATCAGTGGCCGGAGCGACATGAGCAGCATTCAGGACTTCCTGCAGCAGATCACTGGAGCTAGAACTgtgccCCGTGTGTTTATAGGTGAGGAGTGTATTGGTGGGGGCAGTGACGTGTCTGAGCTGCACAGAAGTGGTAAACTGGAGGGAATGCTGCAGAAGATCGGAGCGCTGCAGTGATGAGACAGCAgCACGCTGCGTGAGGGAGGTCACATGATGCTGCAGCGGGATTTGCGCAGCTGTCTGCGGCGTTGCTGGTACTCGCTGAGCTCCTGCAGGTATCCTCTGGAGGGCCAGCGCAGACACTCCACCTGCTCACGCTCATCCTCTGttcaacaacagcagcagcactgtgactacacacacacacacaccacagcaacactcccatccctcacacatccacaccacccacacacacccatctCACACACCCAGCCTCCACCCAGCACGTGCATCTCACCCGCTGATTCTGCTCTTTTTAGTATAGAACAGTTTCATCCAATCACAGAACAGCAGTGTTGTCTGTGCAGTTTGGTACCGTAGGTTTGTACTGGAGACACAAAGCTAATGTAGATAACtcataaaaacatgaaaacattattcattattctgcAGTCATCGTTAGGGTTAGTAAGGTTTAACATGTTATGAGAATTGTTGGTTATTATATTGTGTAAATTTGACTGATAAtggtattggaaaaaaaattacaaaaagtttacaaaccaaacaatcagtcatttaattaaaaaaaatcagcaaattaATCCATCATATAAATAATCATTATATCTATACTAAGATGTTTTACATAAACGTCCAtttataaattgctttttattttttgactaAAGCAAAGAATAGTTTTAAAAGAATTCCATCAAAATTTCACCAGAATTCACTAAATTAACAAAATAccctattattattctattattggtcaatatataaaataatatcaataataacGTAAAAGAGAGGAAcaaaaagtgaaagtgaaaatcTCATATCTTTGCTACCCTAACCATGTTCACTTCAAACTGCTTAAAGTAATTAACTAATTTAACATCAGGTTGTTAATTATTTTCACTAATTCATAAACACTCCATCCTTATATAATAGGGctgtgtatataaacacacttatcatatatcatatttataaaatctgagttaaaaaaaagtttactttttatatccaatcagaacaatgggaTCCAACAACAGAGCACAACACTGCTAACTAGTGGACggggtttaaaaacaaaaaaaggaaccactttttttgtcttcaaactaataattaaaaatctatacagtattgtaaatcgaaataacacaataattcgataaatcaatattttctcaCTGCCCGACTATATAATGAGATACTAATGAGGGAGGATTtgttgttagctacattagcatcacagctactGTAACTCCAGTGCAAAAATAAAGAAGCAAACTTCAGAAACCAAACTGTAAAACTGACAACACATCTTAACATGATTAACTGACTTAACAGGTAAAACTGTCCTAAATGTTTGCACTAGCATGGCTTCACAAATCCGTCCATTTAACCATTGTCTGGTTTAATGATTTACATTAGcatgtaaaatgaattaaatatgtaaaatcagC
>TU171961
gcagcagcagcagcagcagcagcagcagcagcatggcTCAGGAGTTTGTGAAAGCTAAGATCCAGGGGGATAAAGTGGTGGTGTTCCTGAAGCCCTCGTGCCCTTACTGCGTTACAGCCAAAGACGTTCTCTCCAAGTACAAGTTCAGAGCTGGACACCTAGAGATGATCGATATCAGTGGCCGGAGCGACATGAGCAGCATTCAGGACTTCCTGCAGCAGATCACTGGAGCTAGAACTgtgccCCGTGTGTTTATAGGTGAGGAGTGTATTGGTGGGGGCAGTGACGTGTCTGAGCTGCACAGAAGTGGTAAACTGGAGGGAATGCTGCAGAAGATCGGAGCGCTGCAGTGATGAGACAGCAgCACGCTGCGTGAGGGAGGTCACATGATGCTGCAGCGGGATTTGCGCAGCTGTCTGCGGCGTTGCTGGTACTCGCTGAGCTCCTGCAGGTATCCTCTGGAGGGCCAGCGCAGACACTCCACCTGCTCACGCTCATCCTCTGttcaacaacagcagcagcactgtgactacacacacacacacaccacagcaacactcccatccctcacacatccacaccacccacacacacccatctCACACACCCAGCCTCCACCCAGCACGTGCATCTCACCCGCTGATTCTGCTCTTTTTAGTATAGAACAGTTTCATCCAATCACAGAACAGCAGTGTTGTCTGTGCAGTTTGGTACCGTAGGTTTGTACTGGAGACACAAAGCTAATGTAGATAACtcataaaaacatgaaaacattattcattattctgcAGTCATCGTTAGGGTTAGTAAGGTTTAACATGTTATGAGAATTGTTGGTTATTATATTGTGTAAATTTGACTGATAAtggtattggaaaaaaaattacaaaaagtttacaaaccaaacaatcagtcatttaattaaaaaaaatcagcaaattaATCCATCATATAAATAATCATTATATCTATACTAAGATGTTTTACATAAACGTCCAtttataaattgctttttattttttgactaAAGCAAAGAATAGTTTTAAAAGAATTCCATCAAAATTTCACCAGAATTCACTAAATTAACAAAATAccctattattattctattattggtcaatatataaaataatatcaataataacGTAAAAGAGAGGAAcaaaaagtgaaagtgaaaatcTCATATCTTTGCTACCCTAACCATGTTCACTTCAAACTGacttatcatatatcatatttataaaatctgagttaaaaaaaagtttactttttatatccaatcagaacaatgggaTCCAACAACAGAGCACAACACTGCTAACTAGTGGACggggtttaaaaacaaaaaaaggaaccactttttttgtcttcaaactaataattaaaaatctatacagtattgtaaatcgaaataacacaataattcgataaatcaatattttctcaCTGCCCGACTATATAATGAGATACTAATGAGGGAGGATTtgttgttagctacattagcatcacagctactGTAACTCCAGTGCAAAAATAAAGAAGCAAACTTCAGAAACCAAACTGTAAAACTGACAACACATCTTAACATGATTAACTGACTTAACAGGTAAAACTGTCCTAAATGTTTGCACTAGCATGGCTTCACAAATCCGTCCATTTAACCATTGTCTGGTTTAATGATTTACATTAGcatgtaaaatgaattaaatatgtaaaatcagC
>XM_022676599.1
agcagcagcagcagcagcagcagcatggcTCAGGAGTTTGTGAAAGCTAAGATCCAGGGGGATAAAGTGGTGGTGTTCCTGAAGCCCTCGTGCCCTTACTGCGTTACAGCCAAAGACGTTCTCTCCAAGTACAAGTTCAGAGCTGGACACCTAGAGATGATCGATATCAGTGGCCGGAGCGACATGAGCAGCATTCAGGACTTCCTGCAGCAGATCACTGGAGCTAGAACTgtgccCCGTGTGTTTATAGGTGAGGAGTGTATTGGTGGGGGCAGTGACGTGTCTGAGCTGCACAGAAGTGGTAAACTGGAGGGAATGCTGCAGAAGATCGGAGCGCTGCAGTGATGAGACAGCAgCACGCTGCGTGAGGGAGGTCACATGATGCTGCAGCGGGATTTGCGCAGCTGTCTGCGGCGTTGCTGGTACTCGCTGAGCTCCTGCAGGTATCCTCTGGAGGGCCAGCGCAGACACTCCACCTGCTCACGCTCATCCTCTGttcaacaacagcagcagcactgtgactacacacacacacacaccacagcaacactcccatccctcacacatccacaccacccacacacacccatctCACACACCCAGCCTCCACCCAGCACGTGCATCTCACCCGCTGATTCTGCTCTTTTTAGTATAGAACAGTTTCATCCAATCACAGAACAGCAGTGTTGTCTGTGCAGTTTGGTACCGTAGGTTTGTACTGGAGACACAAAGCTAATGTAGATAACtcataaaaacatgaaaacattattcattattctgcAGTCATCGTTAGGGTTAGTAAGGTTTAACATGTTATGAGAATTGTTGGTTATTATATTGTGTAAATTTGACTGATAAtggtattggaaaaaaaattacaaaaagtttacaaaccaaacaatcagtcatttaattaaaaaaaatcagcaaattaATCCATCATATAAATAATCATTATATCTATACTAAGATGTTTTACATAAACGTCCAtttataaattgctttttattttttgactaAAGCAAAGAATAGTTTTAAAAGAATTCCATCAAAATTTCACCAGAATTCACTAAATTAACAAAATAccctattattattctattattggtcaatatataaaataatatcaataataacGTAAAAGAGAGGAAcaaaaagtgaaagtgaaaatcTCATATCTTTGCTACCCTAACCATGTTCACTTCAAACTGCTTAAAGTAATTAACTAATTTAACATCAGGTTGTTAATTATTTTCACTAATTCATAAACACTCCATCCTTATATAATAGGGctgtgtatataaacacacttatcatatatcatatttataaaatctgagttaaaaaaaagtttactttttatatccaatcagaacaatgggaTCCAACAACAGAGCACAACACTGCTAACTAGTGGACggggtttaaaaacaaaaaaaggaaccactttttttgtcttcaaactaataattaaaaatctatacagtattgtaaatcgaaataacacaataattcgataaatcaatattttctcaCTGCCCGACTATATAATGAGATACTAATGAGGGAGGATTtgttgttagctacattagcatcacagctactGTAACTCCAGTGCAAAAATAAAGAAGCAAACTTCAGAAACCAAACTGTAAAACTGACAACACATCTTAACATGATTAACTGACTTAACAGGTAAAACTGTCCTAAATGTTTGCACTAGCATGGCTTCACAAATCCGTCCATTTAACCATTGTCTGGTTTAATGATTTACATTAGcatgtaaaatgaattaaatatgtaaaatcagCAAA

Function

symbol description
glrx Predicted to enable electron transfer activity; protein-disulfide reductase activity; and transferase activity. Orthologous to human GLRX (glutaredoxin).

NR:

description
PREDICTED: glutaredoxin-1-like

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171960 True 1819 lncRNA 0.39 3 35755344 35761109
TU171961 False 1722 lncRNA 0.39 4 35755344 35761109
XM_022676599.1 False 1814 mRNA 0.38 3 35755352 35761112

Neighbor

gene id symbol gene type direction distance location
ell2 ell2 coding upstream 8338 35717435 ~ 35747006 (+)
LOC103028363 LOC108437782 coding upstream 44167 35706224 ~ 35711177 (+)
pcsk1 pcsk1,LOC107739678 coding upstream 56241 35671315 ~ 35699103 (+)
LOC103029511 NA coding upstream 180640 35568055 ~ 35574704 (+)
LOC103030369 LOC103030369 coding upstream 201053 35543658 ~ 35554291 (+)
nudt2 nudt2,LOC107661859,LOC107739745,LOC107579639 coding downstream 48393 35809505 ~ 35811707 (+)
LOC103026124 LOC108436592,LOC106955578,LOC104953222 coding downstream 90302 35851414 ~ 35865427 (+)
LOC103043841 LOC103043841 coding downstream 208997 35970109 ~ 35975545 (+)
LOC103043535 NA coding downstream 215672 35976784 ~ 35980086 (+)
jak2 jak2 coding downstream 220756 35981868 ~ 36040966 (+)
G127291 NA non-coding upstream 3966 35750262 ~ 35751378 (+)
G127279 NA non-coding upstream 52237 35650119 ~ 35703107 (+)
G127264 NA non-coding upstream 118772 35555911 ~ 35636572 (+)
G127274 NA non-coding upstream 150701 35596326 ~ 35604643 (+)
G127268 NA non-coding upstream 173352 35578546 ~ 35581992 (+)
G127362 NA non-coding downstream 186278 35947390 ~ 35948045 (+)
G127375 NA non-coding downstream 221586 35982698 ~ 35983876 (+)
G127386 NA non-coding downstream 306815 36067927 ~ 36094480 (+)
G127379 NA non-coding downstream 307223 36068335 ~ 36069013 (+)
G127378 NA non-coding downstream 308307 36069419 ~ 36072536 (+)
G127250 NA other upstream 262869 35476122 ~ 35492475 (+)
vav2 vav2 other upstream 290742 35171516 ~ 35464602 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 other upstream 999215 34718796 ~ 34756129 (+)
LOC103023469 NA other upstream 1272957 34478626 ~ 34482387 (+)
LOC103040215 esm1 other upstream 1290348 34457981 ~ 34464996 (+)
ubap1 ubap1 other downstream 67523 35828635 ~ 35838054 (+)
G127359 NA other downstream 173807 35934919 ~ 35943122 (+)
G127365 NA other downstream 193746 35954858 ~ 35958301 (+)
dtwd2 dtwd2 other downstream 205222 35966334 ~ 35969453 (+)
G127393 NA other downstream 414681 36175793 ~ 36177113 (+)

Expression


Co-expression Network