LOC103030369 (LOC103030369)


Basic Information

Item Value
gene id LOC103030369
gene name LOC103030369
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035910.1
NCBI id CM008313.1
chromosome length 38842236
location 35543658 ~ 35554291 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007253939.3
actgcagttccTCCCAGCTTCGTGACATAAGAAGAAGGACAGGCCCAGGAGCAGTATAGCAAactcacacacttatatacacactcacacacacacttcacactcgTACTCAGTGGTGTCAACAGCAGCCAACAGCCCAAGATGACCGTGAGTCAGGTCTGCATGTTCCTGTGTCTTCTAGCTGCAGCGTCTGCAGAGAACATCCTCTACCCCAGCATTGGCGGCTCTGAGACCCTAACCTGTGCATGCCCGGACCACCAGTGCCAGAGGGTCTTCTGGTACCGATTCCTTCAGAAAGATGAGACGCTGCAGTTCCTCCTGGAATGTAAcactgtagataaagtaaattATGGGAATAATATCGATACACAGCGCTTTAAAGCCTCGTCCAATGGCGGCTCGGGCAAGTTCACCCTGCGCATCACCAGCCTGCAGCAGAACGACACGGGCCTCTACTCCTGTTTACTCCACAGCCAGAACCCCAAACAAGGGCTGGAGAGCCTGACGTCACCTGGATACTATATCAaacctggagAACACCGACCAACATCTCCACCTCCAACGGTCAAGCCGAAAGTGAAAAATCCTCCTCCCTGCAAACCCAACATTCAGCCTGTGAAAGGCTGTAAACCTCTAGTGCTCTGGTCGTGTGTTGGTGTTCTTCTGGTGCTGGCGGTGCTCATGATCTCAATACTGACTTACTTCAGcaGGCTACCAAAGAAGTGCCGACATCAGTTCGCCAAAAAGGTGCAGCTGAACTGAGAAGACTCTTCTCTTCTGCCGACAGTCGCGAGGCTTTGAGTGATCATCTCCACCCCAGCGGTCACTGTTCATCTTTTCATCTGGAAAACCTAGAGCTGATCTATTCTTGATATTTGCAATTAAAACGATAGATCTAGAAAACTAAGACACACATTTCTGTGATGGTTTCAGGTCCCGATTCCTTATACTTTAACATAGTAGTAGGATTTTGCTTGAGTTTGGAGTAACAGCTAATGCCTTTGCACAAACAGTCTTATATCTTATGAACAAAAATGCGAATTTTATGGGATTTTAcaaaagaaggaaaaacatTAAGTCATTTTGAAGGATTTTTATTGGTTCCTTAATGATAAACTTTAGATACAATAAAGAGAACAACTGTCAGATTAACAATatgtcaaaaaaataaaaaatagcaataatggagatacaaggttatTGTAGAAGAGTAACATATGCAAGTATAATCATTATAGTCttaaatcaattattttttatt

Function

NR:

description
uncharacterized protein LOC103030369

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007253939.3 True 1261 mRNA 0.44 6 35543658 35554291

Neighbor

gene id symbol gene type direction distance location
LOC103029836 NA coding upstream 7414 35527421 ~ 35536244 (+)
LOC103032475 brd3,brd3a coding upstream 380630 35153924 ~ 35163028 (+)
LOC103036996 rxra coding upstream 408940 34850991 ~ 35134718 (+)
LOC103023802 LOC108438099,LOC107741960 coding upstream 1017104 34501582 ~ 34526554 (+)
LOC111188203 NA coding upstream 1066975 34475350 ~ 34476683 (+)
LOC103029511 NA coding downstream 13764 35568055 ~ 35574704 (+)
pcsk1 pcsk1,LOC107739678 coding downstream 117024 35671315 ~ 35699103 (+)
LOC103028363 LOC108437782 coding downstream 151933 35706224 ~ 35711177 (+)
ell2 ell2 coding downstream 163144 35717435 ~ 35747006 (+)
nudt2 nudt2,LOC107661859,LOC107739745,LOC107579639 coding downstream 255214 35809505 ~ 35811707 (+)
G127188 NA non-coding upstream 128887 35414319 ~ 35414771 (+)
G127152 NA non-coding upstream 216265 35296361 ~ 35327393 (+)
G127122 NA non-coding upstream 449451 35093643 ~ 35094207 (+)
G127109 NA non-coding upstream 574565 34968673 ~ 34969093 (+)
G127097 NA non-coding upstream 698215 34845169 ~ 34845443 (+)
G127264 NA non-coding downstream 1620 35555911 ~ 35636572 (+)
G127268 NA non-coding downstream 24255 35578546 ~ 35581992 (+)
G127274 NA non-coding downstream 42035 35596326 ~ 35604643 (+)
G127279 NA non-coding downstream 95828 35650119 ~ 35703107 (+)
G127291 NA non-coding downstream 195971 35750262 ~ 35751378 (+)
G127250 NA other upstream 51183 35476122 ~ 35492475 (+)
vav2 vav2 other upstream 79056 35171516 ~ 35464602 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 other upstream 787529 34718796 ~ 34756129 (+)
LOC103023469 NA other upstream 1061271 34478626 ~ 34482387 (+)
LOC103040215 esm1 other upstream 1078662 34457981 ~ 34464996 (+)
glrx glrx,LOC105014469,LOC107661879 other downstream 201053 35755344 ~ 35761112 (+)
ubap1 ubap1 other downstream 274344 35828635 ~ 35838054 (+)
G127359 NA other downstream 380628 35934919 ~ 35943122 (+)
G127365 NA other downstream 400567 35954858 ~ 35958301 (+)
dtwd2 dtwd2 other downstream 412043 35966334 ~ 35969453 (+)

Expression


Co-expression Network