LOC103032471 (gsk3aa,gsk3a,LOC108433748,LOC107665161,LOC107549848)


Basic Information

Item Value
gene id LOC103032471
gene name gsk3aa,gsk3a,LOC108433748,LOC107665161,LOC107549848
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8011038 ~ 8024403 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007253101.3
cctctctatctctctctctctcagtcagcCGTCGTAGTTGTTTTGAACCCTGTGTCCCATCCAGTCCTCTTAGGGTGTAGCCAGCCAGGACTTCATTTCCCAGGCGGCACCGAGATTTGACAGTCCGAGCTACCGAGGAGAGCCACGGCTGGAGGGTGGCAGAATATTGAGTCCTTTTCTTTGtagctctttatttttaagtctcagtttaGCCACGGTCTCGTCTTTGTCAGTGAAAACTCCGGCGAGCCCCAATCTCCTGCCCCGCCACACGCTTTTAAACAGATATGAGCGGCAGCGGGCGGCCCAGGACGAGCTCGTTCGCTGACCCTCCCGGCGCCGCTTCATCATCCGCGGGATCAGCCGCTGTCGTGGGGAGTAACACGGGAAAGACCGGGGACTCTCAGGCCTCGGGGGGAAGCGCATCTAATCTGAAGTTGGGCAGACCTGGAGGTGAGGTGACTACCGTGGTTGCCACCCCTGGCCAGGGTCCAGACCGTCCCCAGGAAGTGTCCTACACGGACATCAAGGTGATCGGTAATGGCTCTTTTGGTGTGGTGTATCAAGCACGCCTCATTGACACCCAGGAACTGGTGGCCATCAAAAAAGTTCTTCAAGATAAAAGGTTTAAGAACCGAGAGCTACAGATCATGAGGAAGCTGGATCACTGTAACATAGTTAGATTACGGTACTTCTTTTACTCCAGTGGTGAGAAGAAAGATGAGGTCTATCTGAATCTGGTGCTGGACTTTGTGCCAGAAACAGTGTACAGGGTGGCACGGCATTTCAACAAAGCCAAGACCATCATTCCTATCATTTATGTGAAGGTCTATATGTACCAGCTGTTCCGCAGTCTGGCCTATATCCATTCCCAAGGTGTGTGTCATAGAGACATTAAACCACAGAATCTGCTGGTGGACCCAGAGACAGCTGTGCTCAAGCTCTGTGACTTTGGcagTGCAAAGCAGTTGATAAGAGGCGAGCCCAACGTCTCCTACATCTGTTCCCGGTATTACCGTGCACCCGAGCTCATCTTTGGGGCGACTGACTACACCTCTAACATAGACATCTGGTCGGCTGGCTGTGTGCTGGCTGAGCTGCTGCTGGGACAGCCTATTTTCCCTGGAGACAGTGGCGTAGACCAGCTAGTGGAAATCATCAAGGTGCTGGGCACTCCAACAAGAGAACAGATTCGAGAAATGAACCCCAACTACACAGAATTCAAATTCCCACAGATCAAAGCTCACCCTTGGACAAAGGTCTTCAAGCCACGGACTCCTCCTGAGGCGATCGCTTTGTGTTCTCGGCTTTTGGAGTACACACCAGTGACACGCCTTTCTCCGCTTCAGGCCTGCGCCCACGCCTTCTTTGACGAGCTGCGTCAGCCGGGCACACGCCTGCCCAGCGGGCGTGAACTCCCCCAGCTTTTCAATTTCACCACAACCGAGCTGTCTATTCAACCTCAGCTAAACCCCACTCTCATTCCACCTCATGCCCGTGCACAGACTACGTCCTCTTCACACGatggtTCAGACGGTTCGGGACAGCCCAACTCGACTCTGACCAACAGCGCCTGAAGCACTGACAAGTTCAAACAAATGTGCAACCAATCTGAGCCACCTCCTCAGTACACACCTAAACAAACGCACTCATGCACACTTACCTCATACATGGTTTCTCTTCCCTATTAGGTCTGAACCTTcagaaaaaaaggaggaaaaaaagtaaactctcattctctcatttAGTCATTCAGGTTTTGCCTCTGACATTTCAGTGTCTTCAGTGACTGACAATTGTGTACTATTTTAACAGAGATAATGGTTTAGAAAGGTCTACAACTACTACTGATCCAGTTGTCTAAGCTgcatacacacagacatatacacacacatacatgtgcACACAGACAAACATACACAGAAACCTACATACACACGTTTTGTTCCTGCTAAATCTATTCTGGTTAATGTCAGTCAGTCGTTTTTGAAGTGAGTGTCCTGACCAGCTATGCCTGTTAAGGACACTCATAACACAAAACAGGTTATGGCTGTTGTTAACAGTCACATCTCTGGTTGCAGGGATTGAAAATTATCGATATTAAAGTGGCAGGAGGGGCAGGTCCTCTGTCTAATAA
>XM_007253102.3
ctctctatctctctctctctcagtcagcCGTCGTAGTTGTTTTGAACCCTGTGTCCCATCCAGTCCTCTTAGGGTGTAGCCAGCCAGGACTTCATTTCCCAGGCGGCACCGAGATTTGACAGTCCGAGCTACCGAGGAGAGCCACGGCTGGAGGGTGGCAGAATATTGAGTCCTTTTCTTTGtagctctttatttttaagtctcagtttaGCCACGGTCTCGTCTTTGTCAGTGAAAACTCCGGCGAGCCCCAATCTCCTGCCCCGCCACACGCTTTTAAACAGATATGAGCGGCAGCGGGCGGCCCAGGACGAGCTCGTTCGCTGACCCTCCCGGCGCCGCTTCATCATCCGCGGGATCAGCCGCTGTCGTGGGGAGTAACACGGGAAAGACCGGGGACTCTCAGGCCTCGGGGGGAAGCGCATCTAATCTGAAGTTGGGCAGACCTGGAGGTGAGGTGACTACCGTGGTTGCCACCCCTGGCCAGGGTCCAGACCGTCCCCAGGAAGTGTCCTACACGGACATCAAGGTGATCGGTAATGGCTCTTTTGGTGTGGTGTATCAAGCACGCCTCATTGACACCCAGGAACTGGTGGCCATCAAAAAAGTTCTTCAAGATAAAAGGTTTAAGAACCGAGAGCTACAGATCATGAGGAAGCTGGATCACTGTAACATAGTTAGATTACGGTACTTCTTTTACTCCAGTGGTGAGAAGAAAGATGAGGTCTATCTGAATCTGGTGCTGGACTTTGTGCCAGAAACAGTGTACAGGGTGGCACGGCATTTCAACAAAGCCAAGACCATCATTCCTATCATTTATGTGAAGGTCTATATGTACCAGCTGTTCCGCAGTCTGGCCTATATCCATTCCCAAGGTGTGTGTCATAGAGACATTAAACCACAGAATCTGCTGGTGGACCCAGAGACAGCTGTGCTCAAGCTCTGTGACTTTGGcagTGCAAAGCAGTTGATAAGAGGCGAGCCCAACGTCTCCTACATCTGTTCCCGGTATTACCGTGCACCCGAGCTCATCTTTGGGGCGACTGACTACACCTCTAACATAGACATCTGGTCGGCTGGCTGTGTGCTGGCTGAGCTGCTGCTGGGACAGCCTATTTTCCCTGGAGACAGTGGCGTAGACCAGCTAGTGGAAATCATCAAGGTGCTGGGCACTCCAACAAGAGAACAGATTCGAGAAATGAACCCCAACTACACAGAATTCAAATTCCCACAGATCAAAGCTCACCCTTGGACAAAGGTCTTCAAGCCACGGACTCCTCCTGAGGCGATCGCTTTGTGTTCTCGGCTTTTGGAGTACACACCAGTGACACGCCTTTCTCCGCTTCAGGCCTGCGCCCACGCCTTCTTTGACGAGCTGCGTCAGCCGGGCACACGCCTGCCCAGCGGGCGTGAACTCCCCCAGCTTTTCAATTTCACCACAACCGAGCTGTCTATTCAACCTCAGCTAAACCCCACTCTCATTCCACCTCATGCCCGTGCACAGACTACGTCCTCTTCACACGGTAATGATACCATCCACCATCCTGCTCCAGTTAGGCTGTAAGAGTGGCTGAGGTTCCAACAatggtTCAGACGGTTCGGGACAGCCCAACTCGACTCTGACCAACAGCGCCTGAAGCACTGACAAGTTCAAACAAATGTGCAACCAATCTGAGCCACCTCCTCAGTACACACCTAAACAAACGCACTCATGCACACTTACCTCATACATGGTTTCTCTTCCCTATTAGGTCTGAACCTTcagaaaaaaaggaggaaaaaaagtaaactctcattctctcatttAGTCATTCAGGTTTTGCCTCTGACATTTCAGTGTCTTCAGTGACTGACAATTGTGTACTATTTTAACAGAGATAATGGTTTAGAAAGGTCTACAACTACTACTGATCCAGTTGTCTAAGCTgcatacacacagacatatacacacacatacatgtgcACACAGACAAACATACACAGAAACCTACATACACACGTTTTGTTCCTGCTAAATCTATTCTGGTTAATGTCAGTCAGTCGTTTTTGAAGTGAGTGTCCTGACCAGCTATGCCTGTTAAGGACACTCATAACACAAAACAGGTTATGGCTGTTGTTAACAGTCACATCTCTGGTTGCAGGGATTGAAAATTATCGATATTAAAGTGGCAGGAGGGGCAGGTCCTCTGTCTAATAA
>XM_022682995.1
ccctctctatctctctctctctcagtcagcCGTCGTAGTTGTTTTGAACCCTGTGTCCCATCCAGTCCTCTTAGGGTGTAGCCAGCCAGGACTTCATTTCCCAGGCGGCACCGAGATTTGACAGTCCGAGCTACCGAGGAGAGCCACGGCTGGAGGGTGGCAGAATATTGAGTCCTTTTCTTTGtagctctttatttttaagtctcagtttaGCCACGGTCTCGTCTTTGTCAGTGAAAACTCCGGCGAGCCCCAATCTCCTGCCCCGCCACACGCTTTTAAACAGATATGAGCGGCAGCGGGCGGCCCAGGACGAGCTCGTTCGCTGACCCTCCCGGCGCCGCTTCATCATCCGCGGGATCAGCCGCTGTCGTGGGGAGTAACACGGGAAAGACCGGGGACTCTCAGGCCTCGGGGGGAAGCGCATCTAATCTGAAGTTGGGCAGACCTGGAGGTGAGGTGACTACCGTGGTTGCCACCCCTGGCCAGGGTCCAGACCGTCCCCAGGAAGTGTCCTACACGGACATCAAGGTGATCGGTAATGGCTCTTTTGGTGTGGTGTATCAAGCACGCCTCATTGACACCCAGGAACTGGTGGCCATCAAAAAAGTTCTTCAAGATAAAAGGTTTAAGAACCGAGAGCTACAGATCATGAGGAAGCTGGATCACTGTAACATAGTTAGATTACGGTACTTCTTTTACTCCAGTGGTGAGAAGAAAGATGAGGTCTATCTGAATCTGGTGCTGGACTTTGTGCCAGAAACAGTGTACAGGGTGGCACGGCATTTCAACAAAGCCAAGACCATCATTCCTATCATTTATGTGAAGGTCTATATGTACCAGCTGTTCCGCAGTCTGGCCTATATCCATTCCCAAGGTGTGTGTCATAGAGACATTAAACCACAGAATCTGCTGGTGGACCCAGAGACAGCTGTGCTCAAGCTCTGTGACTTTGGcagTGCAAAGCAGTTGATAAGAGGCGAGCCCAACGTCTCCTACATCTGTTCCCGGTATTACCGTGCACCCGAGCTCATCTTTGGGGCGACTGACTACACCTCTAACATAGACATCTGGTCGGCTGGCTGTGTGCTGGCTGAGCTGCTGCTGGGACAGCCTATTTTCCCTGGAGACAGTGGCGTAGACCAGCTAGTGGAAATCATCAAGGTGCTGGGCACTCCAACAAGAGAACAGATTCGAGAAATGAACCCCAACTACACAGAATTCAAATTCCCACAGATCAAAGCTCACCCTTGGACAAAGGTCTTCAAGCCACGGACTCCTCCTGAGGCGATCGCTTTGTGTTCTCGGCTTTTGGAGTACACACCAGTGACACGCCTTTCTCCGCTTCAGGCCTGCGCCCACGCCTTCTTTGACGAGCTGCGTCAGCCGGGCACACGCCTGCCCAGCGGGCGTGAACTCCCCCAGCTTTTCAATTTCACCACAACCGatggtTCAGACGGTTCGGGACAGCCCAACTCGACTCTGACCAACAGCGCCTGAAGCACTGACAAGTTCAAACAAATGTGCAACCAATCTGAGCCACCTCCTCAGTACACACCTAAACAAACGCACTCATGCACACTTACCTCATACATGGTTTCTCTTCCCTATTAGGTCTGAACCTTcagaaaaaaaggaggaaaaaaagtaaactctcattctctcatttAGTCATTCAGGTTTTGCCTCTGACATTTCAGTGTCTTCAGTGACTGACAATTGTGTACTATTTTAACAGAGATAATGGTTTAGAAAGGTCTACAACTACTACTGATCCAGTTGTCTAAGCTgcatacacacagacatatacacacacatacatgtgcACACAGACAAACATACACAGAAACCTACATACACACGTTTTGTTCCTGCTAAATCTATTCTGGTTAATGTCAGTCAGTCGTTTTTGAAGTGAGTGTCCTGACCAGCTATGCCTGTTAAGGACACTCATAACACAAAACAGGTTATGGCTGTTGTTAACAGTCACATCTCTGGTTGCAGGGATTGAAAATTATCGATATTAAAGTGGCAGGAGGGGCAGGTCCTCTGTCTAATAA

Function

symbol description
gsk3aa Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in cell surface receptor signaling pathway; negative regulation of signal transduction; and regulation of neuron projection development. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in axon; cytosol; and nucleus. Is expressed in testis. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis. Orthologous to human GSK3A (glycogen synthase kinase 3 alpha).
gsk3a Enables protein kinase A catalytic subunit binding activity; protein serine/threonine kinase activity; and signaling receptor binding activity. Involved in several processes, including negative regulation of glucose import; negative regulation of glycogen synthase activity, transferring glucose-1-phosphate; and positive regulation of protein metabolic process. Predicted to be located in microtubule; mitochondrion; and postsynapse. Predicted to be part of beta-catenin destruction complex. Predicted to be active in axon; cytosol; and nucleus. Implicated in amyotrophic lateral sclerosis.

NR:

description
PREDICTED: glycogen synthase kinase-3 alpha-like isoform X2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08822 GSK3A; glycogen synthase kinase 3 alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007253101.3 False 2137 mRNA 0.50 10 8011039 8024403
XM_007253102.3 True 2197 mRNA 0.50 10 8011040 8024403
XM_022682995.1 False 2060 mRNA 0.50 9 8011038 8024403

Neighbor

gene id symbol gene type direction distance location
LOC103031520 LOC108433746,LOC106537162 coding upstream 2765 7959727 ~ 8008273 (+)
LOC103031214 erf,LOC108433745,LOC107665162,LOC107753815,LOC107752521,LOC107666335 coding upstream 77921 7884591 ~ 7933117 (+)
LOC103030895 LOC108433744,LOC107753802,LOC100537384,LOC107554351 coding upstream 158621 7797300 ~ 7852417 (+)
LOC103030580 LOC108433742,LOC100707930,LOC102779181,LOC102313318,LOC101487824,LOC102211354 coding upstream 243396 7738085 ~ 7767642 (+)
LOC107197718 LOC108433741 coding upstream 348595 7326417 ~ 7662443 (+)
LOC103032989 NA coding downstream 5556 8029959 ~ 8061563 (+)
LOC103040794 LOC108439895,LOC108272392,LOC107693370,LOC107589385,LOC107739517,LOC107599531,LOC107724118,LOC107656604 coding downstream 482832 8507235 ~ 8645067 (+)
LOC103023428 cacng7a,LOC103023428,LOC108439893,LOC107739516,LOC107656583,LOC107599530,LOC107724112,LOC107589388,LOC107693369 coding downstream 670143 8694546 ~ 8739898 (+)
LOC103022608 cacng8a,LOC103022608,LOC108439892,LOC107693368,LOC107724111,LOC107599529,LOC107739619,LOC107589386,LOC107656603 coding downstream 728995 8753398 ~ 8777711 (+)
LOC103021572 slc2a3a,LOC108439890,LOC107724104,LOC107693366,LOC107739512,LOC108273342,LOC107665492,LOC107589470 coding downstream 826829 8851232 ~ 8871199 (+)
LOC111195566 NA non-coding upstream 131099 7878476 ~ 7879939 (+)
LOC111195565 NA non-coding upstream 137559 7859293 ~ 7873479 (+)
G195898 NA non-coding upstream 346620 7645233 ~ 7664418 (+)
G195895 NA non-coding upstream 692260 7318562 ~ 7318778 (+)
G195799 NA non-coding upstream 695602 7315202 ~ 7315436 (+)
G196074 NA non-coding downstream 75590 8099993 ~ 8100257 (+)
G196105 NA non-coding downstream 232837 8257240 ~ 8257899 (+)
G196143 NA non-coding downstream 384535 8408938 ~ 8409357 (+)
LOC111195502 NA non-coding downstream 387126 8411529 ~ 8415497 (+)
G196193 NA non-coding downstream 542554 8566957 ~ 8568472 (+)
G195793 NA other upstream 717345 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 883924 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 1063882 6922288 ~ 6947156 (+)
LOC111195564 NA other upstream 1447526 6562192 ~ 6563512 (+)
LOC103042712 sh3bgrl3,LOC107700758,LOC107689536,LOC105933927 other upstream 1459878 6505959 ~ 6551160 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other downstream 119470 8143873 ~ 8405469 (+)
G196232 NA other downstream 654881 8679284 ~ 8679970 (+)
mrps21 mrps21 other downstream 1510026 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 1578924 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 1676337 9700740 ~ 9704709 (+)

Expression


Co-expression Network