G925


Basic Information

Item Value
gene id G925
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 3049405 ~ 3049745 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU1246
tacttttggcagtgtgggcagtgtgccaagtcctgctggaaaatgaaatccgcatctccataaaagttgtcagtagcagagggaagcatgaagtgctgtaagattttgtgggaaaactaaactgcactgactttagacttgataataaaacacagtggatcaacaccagcagatgacatgtctctccaaaccatcactgatcatcagtaaattttacatttcatgtgaaaatcaagggatcagagtctggaggaagagtggagagacacacagtccaaactgcttgaggtctagtgtgaagtttccaccaatcagtgatggtttggagagacatgtcatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1246 True 341 lncRNA 0.33 1 3049405 3049745

Neighbor

gene id symbol gene type direction distance location
LOC103032345 ptgs2 coding upstream 2991 3038904 ~ 3046414 (+)
LOC103032654 NA coding upstream 92162 2939999 ~ 2957243 (+)
rnf2 rnf2,LOC107718134,LOC107693737,LOC107677769 coding upstream 145932 2894461 ~ 2903473 (+)
mblac1 mblac1 coding upstream 215538 2832021 ~ 2833867 (+)
LOC103035213 kifap3b,LOC108444490,LOC107564707,LOC108278253 coding upstream 222339 2783092 ~ 2827066 (+)
LOC103031387 pdc,pdca,LOC108277616 coding downstream 28690 3078435 ~ 3094298 (+)
LOC103034241 LOC108431151 coding downstream 65937 3115682 ~ 3164308 (+)
dusp12 dusp12 coding downstream 192109 3241854 ~ 3251495 (+)
LOC103033610 LOC108441578 coding downstream 275565 3325310 ~ 3369564 (+)
LOC103029907 NA coding downstream 336773 3386518 ~ 3391009 (+)
G910 NA non-coding upstream 61860 2984551 ~ 2987545 (+)
G880 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC107599090,LOC103045524 non-coding upstream 79086 2961574 ~ 2970319 (+)
G849 NA non-coding upstream 301141 2748029 ~ 2748264 (+)
G802 NA non-coding upstream 347979 2700401 ~ 2701426 (+)
G799 NA non-coding upstream 435607 2610779 ~ 2613798 (+)
G932 NA non-coding downstream 48347 3098092 ~ 3100180 (+)
G944 NA non-coding downstream 119422 3169167 ~ 3170571 (+)
G945 NA non-coding downstream 133860 3183605 ~ 3185713 (+)
G987 NA non-coding downstream 137785 3187530 ~ 3187960 (+)
G1007 olfml2b,olfml2bb,LOC107594675,LOC107693709,LOC107722514,LOC108277438 non-coding downstream 246490 3296235 ~ 3298867 (+)
G853 NA other upstream 269523 2779505 ~ 2779882 (+)
LOC103034128 csnk1g2,LOC106925954,LOC106953035,LOC107722536,LOC103468226,LOC107718129,LOC104921814 other upstream 439248 2568371 ~ 2610157 (+)
LOC103036450 mknk2a,LOC108432510,LOC107722535,LOC107564711,LOC107693729,LOC106569835,LOC107745831 other upstream 494637 2523293 ~ 2554768 (+)
G778 NA other upstream 561131 2481531 ~ 2488274 (+)
G738 NA other upstream 614974 2432015 ~ 2434431 (+)
G1045 NA other downstream 398731 3448476 ~ 3449642 (+)
kcne4 NA other downstream 745074 3794819 ~ 3796548 (+)
G1127 LOC107669897,LOC107733923,LOC107558818 other downstream 932079 3981824 ~ 3986728 (+)
LOC103026740 NA other downstream 2121630 5171375 ~ 5244187 (+)
LOC111192942 NA other downstream 2200739 5250484 ~ 5276988 (+)

Expression


Co-expression Network