Gene
RNA
| Item | Value |
|---|---|
| gene id | G1363 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 4354873 ~ 4355132 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1848 | True | 260 | lncRNA | 0.37 | 1 | 4354873 | 4355132 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103028190 | LOC103028190 | coding | downstream | 16079 | 4334848 ~ 4338794 (-) |
| LOC111193765 | NA | coding | downstream | 117428 | 4220875 ~ 4237445 (-) |
| LOC103027148 | NA | coding | downstream | 133957 | 4214015 ~ 4220916 (-) |
| dnhd1 | NA | coding | downstream | 147350 | 4149693 ~ 4207523 (-) |
| med29 | med29 | coding | downstream | 227647 | 4122118 ~ 4127226 (-) |
| LOC111192761 | NA | coding | upstream | 32115 | 4387247 ~ 4388980 (-) |
| LOC111192762 | NA | coding | upstream | 36814 | 4391946 ~ 4393659 (-) |
| LOC107197778 | NA | coding | upstream | 379906 | 4735038 ~ 4747924 (-) |
| irs1 | irs1,LOC107577679 | coding | upstream | 550609 | 4905741 ~ 4943017 (-) |
| LOC103027032 | NA | coding | upstream | 618414 | 4973546 ~ 5101897 (-) |
| G1353 | NA | non-coding | downstream | 78079 | 4275838 ~ 4276794 (-) |
| G1324 | NA | non-coding | downstream | 193000 | 4161479 ~ 4161873 (-) |
| G1323 | NA | non-coding | downstream | 198033 | 4156601 ~ 4156840 (-) |
| G1301 | NA | non-coding | downstream | 273090 | 4079537 ~ 4081783 (-) |
| G1290 | NA | non-coding | downstream | 344993 | 4006162 ~ 4009880 (-) |
| G1374 | NA | non-coding | upstream | 25466 | 4380598 ~ 4381126 (-) |
| G1385 | NA | non-coding | upstream | 291649 | 4646781 ~ 4655868 (-) |
| G1399 | NA | non-coding | upstream | 328102 | 4683234 ~ 4683540 (-) |
| G1414 | NA | non-coding | upstream | 350455 | 4705587 ~ 4705946 (-) |
| G1421 | NA | non-coding | upstream | 362001 | 4717133 ~ 4717442 (-) |
| LOC111193783 | LOC108442858 | other | downstream | 33533 | 4276909 ~ 4321340 (-) |
| LOC111193794 | LOC108442858 | other | downstream | 82903 | 4267001 ~ 4271970 (-) |
| G1308 | NA | other | downstream | 253307 | 4099765 ~ 4101566 (-) |
| wdfy1 | wdfy1,LOC106613124,LOC102785143,LOC103370589 | other | downstream | 445202 | 3882370 ~ 3909671 (-) |
| LOC103029371 | agl,LOC108441576,LOC107722579 | other | downstream | 909487 | 3394204 ~ 3445386 (-) |
| LOC103031123 | LOC108411357 | other | upstream | 1348574 | 5703706 ~ 5721108 (-) |
| nlk | nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 | other | upstream | 4598745 | 8953877 ~ 9092112 (-) |
| LOC103037880 | LOC108432996 | other | upstream | 4758347 | 9113479 ~ 9133571 (-) |
| hspa13 | hspa13,LOC107682527,LOC107666191,LOC107714176 | other | upstream | 5391490 | 9746622 ~ 9755755 (-) |
| rap1gap2 | rap1gap2 | other | upstream | 5892333 | 10247465 ~ 10461860 (-) |
