Gene
RNA
| Item | Value |
|---|---|
| gene id | G1374 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 4380598 ~ 4381126 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1863 | True | 471 | lncRNA | 0.38 | 2 | 4380598 | 4381126 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103028190 | LOC103028190 | coding | downstream | 41804 | 4334848 ~ 4338794 (-) |
| LOC111193765 | NA | coding | downstream | 143153 | 4220875 ~ 4237445 (-) |
| LOC103027148 | NA | coding | downstream | 159682 | 4214015 ~ 4220916 (-) |
| dnhd1 | NA | coding | downstream | 173075 | 4149693 ~ 4207523 (-) |
| med29 | med29 | coding | downstream | 253372 | 4122118 ~ 4127226 (-) |
| LOC111192761 | NA | coding | upstream | 6121 | 4387247 ~ 4388980 (-) |
| LOC111192762 | NA | coding | upstream | 10820 | 4391946 ~ 4393659 (-) |
| LOC107197778 | NA | coding | upstream | 353912 | 4735038 ~ 4747924 (-) |
| irs1 | irs1,LOC107577679 | coding | upstream | 524615 | 4905741 ~ 4943017 (-) |
| LOC103027032 | NA | coding | upstream | 592420 | 4973546 ~ 5101897 (-) |
| G1363 | NA | non-coding | downstream | 25466 | 4354873 ~ 4355132 (-) |
| G1353 | NA | non-coding | downstream | 103804 | 4275838 ~ 4276794 (-) |
| G1324 | NA | non-coding | downstream | 218725 | 4161479 ~ 4161873 (-) |
| G1323 | NA | non-coding | downstream | 223758 | 4156601 ~ 4156840 (-) |
| G1301 | NA | non-coding | downstream | 298815 | 4079537 ~ 4081783 (-) |
| G1385 | NA | non-coding | upstream | 265655 | 4646781 ~ 4655868 (-) |
| G1399 | NA | non-coding | upstream | 302108 | 4683234 ~ 4683540 (-) |
| G1414 | NA | non-coding | upstream | 324461 | 4705587 ~ 4705946 (-) |
| G1421 | NA | non-coding | upstream | 336007 | 4717133 ~ 4717442 (-) |
| G1425 | NA | non-coding | upstream | 352511 | 4733637 ~ 4733883 (-) |
| LOC111193783 | LOC108442858 | other | downstream | 59258 | 4276909 ~ 4321340 (-) |
| LOC111193794 | LOC108442858 | other | downstream | 108628 | 4267001 ~ 4271970 (-) |
| G1308 | NA | other | downstream | 279032 | 4099765 ~ 4101566 (-) |
| wdfy1 | wdfy1,LOC106613124,LOC102785143,LOC103370589 | other | downstream | 470927 | 3882370 ~ 3909671 (-) |
| LOC103029371 | agl,LOC108441576,LOC107722579 | other | downstream | 935212 | 3394204 ~ 3445386 (-) |
| LOC103031123 | LOC108411357 | other | upstream | 1322580 | 5703706 ~ 5721108 (-) |
| nlk | nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 | other | upstream | 4572751 | 8953877 ~ 9092112 (-) |
| LOC103037880 | LOC108432996 | other | upstream | 4732353 | 9113479 ~ 9133571 (-) |
| hspa13 | hspa13,LOC107682527,LOC107666191,LOC107714176 | other | upstream | 5365496 | 9746622 ~ 9755755 (-) |
| rap1gap2 | rap1gap2 | other | upstream | 5866339 | 10247465 ~ 10461860 (-) |
