Gene
RNA
| Item | Value |
|---|---|
| gene id | G2289 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 8497195 ~ 8497545 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU3025 | True | 351 | lncRNA | 0.35 | 1 | 8497195 | 8497545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103025735 | robo2,LOC107741616 | coding | downstream | 14967 | 7829843 ~ 8482228 (-) |
| dhx16 | dhx16,LOC107704755 | coding | downstream | 1316262 | 7165536 ~ 7180933 (-) |
| rnf225 | NA | coding | downstream | 1354285 | 7137056 ~ 7142910 (-) |
| LOC103038529 | LOC108432985 | coding | downstream | 1363584 | 7123071 ~ 7133611 (-) |
| LOC103037673 | LOC108432984 | coding | downstream | 1384946 | 7104292 ~ 7112249 (-) |
| LOC103024281 | NA | coding | upstream | 203652 | 8701197 ~ 8722610 (-) |
| LOC103023547 | LOC108432992,LOC103353587,LOC100691215,LOC108277929,LOC102314497 | coding | upstream | 228786 | 8726331 ~ 8787049 (-) |
| mrps23 | NA | coding | upstream | 359781 | 8857326 ~ 8862790 (-) |
| LOC103026958 | nos2,LOC108432969 | coding | upstream | 369776 | 8867321 ~ 8890459 (-) |
| LOC103031688 | nos2,LOC108432969 | coding | upstream | 414275 | 8911820 ~ 8933110 (-) |
| G2242 | NA | non-coding | downstream | 266130 | 8230087 ~ 8231065 (-) |
| G2232 | NA | non-coding | downstream | 353738 | 8103686 ~ 8143457 (-) |
| G2212 | NA | non-coding | downstream | 483524 | 8012829 ~ 8013671 (-) |
| G2203 | NA | non-coding | downstream | 550978 | 7919125 ~ 7946217 (-) |
| G2195 | NA | non-coding | downstream | 656650 | 7827208 ~ 7840545 (-) |
| G2301 | NA | non-coding | upstream | 60177 | 8557722 ~ 8558144 (-) |
| G2313 | NA | non-coding | upstream | 86238 | 8583783 ~ 8583991 (-) |
| G2324 | NA | non-coding | upstream | 125857 | 8623402 ~ 8623633 (-) |
| G2327 | NA | non-coding | upstream | 130147 | 8627692 ~ 8627903 (-) |
| G2329 | NA | non-coding | upstream | 132277 | 8629822 ~ 8630798 (-) |
| LOC103031123 | LOC108411357 | other | downstream | 2776087 | 5703706 ~ 5721108 (-) |
| LOC111193783 | LOC108442858 | other | downstream | 4175855 | 4276909 ~ 4321340 (-) |
| LOC111193794 | LOC108442858 | other | downstream | 4225225 | 4267001 ~ 4271970 (-) |
| G1308 | NA | other | downstream | 4395629 | 4099765 ~ 4101566 (-) |
| wdfy1 | wdfy1,LOC106613124,LOC102785143,LOC103370589 | other | downstream | 4587524 | 3882370 ~ 3909671 (-) |
| nlk | nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 | other | upstream | 456332 | 8953877 ~ 9092112 (-) |
| LOC103037880 | LOC108432996 | other | upstream | 615934 | 9113479 ~ 9133571 (-) |
| hspa13 | hspa13,LOC107682527,LOC107666191,LOC107714176 | other | upstream | 1249077 | 9746622 ~ 9755755 (-) |
| rap1gap2 | rap1gap2 | other | upstream | 1749920 | 10247465 ~ 10461860 (-) |
| G2783 | NA | other | upstream | 2084744 | 10582289 ~ 10582747 (-) |
