G2429


Basic Information

Item Value
gene id G2429
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 8946340 ~ 8947236 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3221
TTATCAGTAGTCATAGTATGTTTTTAATCAGACGAGACATTCAATACAAAAATCTCAAGCTTGTAtcagttccaaaaaaaaaaatcaaagtttaaagttcttgaaagaCAAATATGTGGATTGTGGATATGGACGGTCCAAATAAATTGTGCGTGTTACGAAGCGGTTATGGGGTTGTAGGTGGtcgctgtggtatcccaggtggttgctattttGTCGCAAAGGGGGTTCTATGGTATCCCATGCTCTGTGGTTGCAGTGGTTTTCCAGGGGTGGTTGCCTTAGGCCCAAactcatttcaccccttggccctaccacttacccctaccccagagttacaaggggaaggggttaaatcctccccctaagaaatGGGACAACTCTTCAAGCACCCAATACATCTTGACGAGTTTccaacactggtcctggagcagttAATGTGGTACAAGAAATCACTAAAAAATACCTACACCAGCCATGAAAAATCCTTCTGTAAGCTTCAGAGTCAATTTCTTCAAATCTGGATAAATGAAAGTTCACTTTCATCCTGCTCTGGAAATCACTTCTGTTTcttgtaCTTATCTAATATCCAGTCAGCATCAGAAATAGCCCTTTGGATGATCATGCGTATTCTTTCTGGGTCGTCCTCATCAGTATGACTATTAAAACTCTGCACAGACCaacacagaacagtgttaacttATCCCAAAGCCTGTGACTGGCTCTGAACTGCAGCCTGTAATCTCATTAGCTCACAGGCCTTTACACAAGACTGAGCTATCTATATCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3221 True 790 lncRNA 0.45 2 8946340 8947236

Neighbor

gene id symbol gene type direction distance location
LOC103031688 nos2,LOC108432969 coding downstream 13230 8911820 ~ 8933110 (-)
LOC103026958 nos2,LOC108432969 coding downstream 55881 8867321 ~ 8890459 (-)
mrps23 NA coding downstream 83550 8857326 ~ 8862790 (-)
LOC103023547 LOC108432992,LOC103353587,LOC100691215,LOC108277929,LOC102314497 coding downstream 159291 8726331 ~ 8787049 (-)
LOC103024281 NA coding downstream 223730 8701197 ~ 8722610 (-)
LOC103039097 serpinh1b,LOC103039097,LOC108433001,LOC108278262,LOC107588392,LOC107756564,LOC107666206 coding upstream 659680 9606916 ~ 9612718 (-)
LOC103040232 samsn1 coding upstream 818804 9766040 ~ 9802680 (-)
LOC103040551 NA coding upstream 865106 9812342 ~ 9814698 (-)
LOC103040855 NA coding upstream 870426 9817662 ~ 9819909 (-)
LOC111195496 tekt1 coding upstream 1561804 10509040 ~ 10512788 (-)
G2329 NA non-coding downstream 315542 8629822 ~ 8630798 (-)
G2327 NA non-coding downstream 318437 8627692 ~ 8627903 (-)
G2324 NA non-coding downstream 322707 8623402 ~ 8623633 (-)
G2313 NA non-coding downstream 362349 8583783 ~ 8583991 (-)
G2301 NA non-coding downstream 388196 8557722 ~ 8558144 (-)
G2447 NA non-coding upstream 266400 9213636 ~ 9213948 (-)
G2450 NA non-coding upstream 304848 9252084 ~ 9252292 (-)
G2451 NA non-coding upstream 331991 9279227 ~ 9279495 (-)
G2454 NA non-coding upstream 368450 9315686 ~ 9315890 (-)
G2477 NA non-coding upstream 516856 9464092 ~ 9465481 (-)
LOC103031123 LOC108411357 other downstream 3225232 5703706 ~ 5721108 (-)
LOC111193783 LOC108442858 other downstream 4625000 4276909 ~ 4321340 (-)
LOC111193794 LOC108442858 other downstream 4674370 4267001 ~ 4271970 (-)
G1308 NA other downstream 4844774 4099765 ~ 4101566 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other downstream 5036669 3882370 ~ 3909671 (-)
nlk nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 other upstream 6641 8953877 ~ 9092112 (-)
LOC103037880 LOC108432996 other upstream 166243 9113479 ~ 9133571 (-)
hspa13 hspa13,LOC107682527,LOC107666191,LOC107714176 other upstream 799386 9746622 ~ 9755755 (-)
rap1gap2 rap1gap2 other upstream 1300229 10247465 ~ 10461860 (-)
G2783 NA other upstream 1635053 10582289 ~ 10582747 (-)

Expression


Co-expression Network