G2731


Basic Information

Item Value
gene id G2731
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 10275904 ~ 10288682 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3577
tatcctgtaggcagtgtcctgtaggcagtagAGTTACATTCAGTAGAatttcatttactttcacctgagagttcagttgcattttTTAGACATTCAGTTGCGCATCTATGAGGTATATTAAatagaccatccaaataaaatgataaagttTTTTAACTAACCTGCCACTACAGATGCATTTTGTTCACatcagtgttttgttatatacagttatatttttctggaaaaaaataagaggccacttcattttctgaatcagtttctctgattttgctatttataggtttatgtttgagtaaaatgaacgttgttgttttattctataaactacagacaacatttctcccaaattccaaataaaattttgtaatttagagcatttatttgcagaaaatgagaaatggctgaaataacaaaaaaatgcagagctttcagctctcaaataatgcaaaaaaaaaaaaaaagttcatatttatatttaagttttaagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3577 True 492 lncRNA 0.53 2 10275904 10288682

Neighbor

gene id symbol gene type direction distance location
LOC103040855 NA coding downstream 455995 9817662 ~ 9819909 (-)
LOC103040551 NA coding downstream 461206 9812342 ~ 9814698 (-)
LOC103040232 samsn1 coding downstream 473224 9766040 ~ 9802680 (-)
LOC103039097 serpinh1b,LOC103039097,LOC108433001,LOC108278262,LOC107588392,LOC107756564,LOC107666206 coding downstream 663186 9606916 ~ 9612718 (-)
LOC103031688 nos2,LOC108432969 coding downstream 1342794 8911820 ~ 8933110 (-)
LOC111195496 tekt1 coding upstream 220358 10509040 ~ 10512788 (-)
LOC111195508 NA coding upstream 464422 10753104 ~ 10756886 (-)
LOC103043674 dhr13,LOC108427000,LOC107685074,LOC107589701,LOC107756995 coding upstream 783716 11072398 ~ 11076365 (-)
LOC103042223 cryba1a,LOC103042223,LOC108426912,LOC107743738,LOC108278232,LOC105898204 coding upstream 792166 11080848 ~ 11083883 (-)
foxn1 foxn1 coding upstream 832125 11120807 ~ 11135302 (-)
G2730 NA non-coding downstream 3379 10271530 ~ 10272525 (-)
G2720 NA non-coding downstream 31723 10217711 ~ 10244181 (-)
G2696 NA non-coding downstream 153216 10120551 ~ 10122688 (-)
G2689 NA non-coding downstream 174419 10039551 ~ 10101485 (-)
G2679 NA non-coding downstream 428063 9847127 ~ 9847841 (-)
G2733 NA non-coding upstream 8061 10296743 ~ 10297613 (-)
G2761 NA non-coding upstream 133180 10421862 ~ 10499272 (-)
G2793 NA non-coding upstream 358236 10646918 ~ 10647124 (-)
G2835 NA non-coding upstream 494466 10783148 ~ 10783487 (-)
G2837 NA non-coding upstream 495122 10783804 ~ 10784140 (-)
hspa13 hspa13,LOC107682527,LOC107666191,LOC107714176 other downstream 520149 9746622 ~ 9755755 (-)
LOC103037880 LOC108432996 other downstream 1142333 9113479 ~ 9133571 (-)
nlk nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 other downstream 1183792 8953877 ~ 9092112 (-)
LOC103031123 LOC108411357 other downstream 4554796 5703706 ~ 5721108 (-)
LOC111193783 LOC108442858 other downstream 5954564 4276909 ~ 4321340 (-)
G2783 NA other upstream 293607 10582289 ~ 10582747 (-)
LOC103025442 lhx1a,LOC108427001,LOC108277614,LOC107743643,LOC105897175,LOC107669762,LOC107589700 other upstream 366176 10654858 ~ 10684465 (-)
sarm1 sarm1,LOC107669752,LOC107743642,LOC107756984,LOC107685076 other upstream 992527 11281209 ~ 11293882 (-)
LOC111192956 LOC108412924,LOC108444125,LOC108444119,LOC108416439 other upstream 1635320 11924002 ~ 11940744 (-)
G3297 sacs,LOC107593479,LOC107740366,LOC107670382 other upstream 2451462 12740144 ~ 12758513 (-)

Expression


Co-expression Network