G2793


Basic Information

Item Value
gene id G2793
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 10646918 ~ 10647124 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3650
cctacagtactgtgcaaaagttttaggcaccaaagcaaattacactaatccatttatctcagcaatatgagtgtttttacctgaaaaaaagcaccatgtatgatttgaacagacgcaaataaatataaatacataaaacacaacAAGGAATTTccatttttaactataagtatgttatatcctgtgagttgaagccaagctgaagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3650 True 207 lncRNA 0.46 1 10646918 10647124

Neighbor

gene id symbol gene type direction distance location
LOC111195496 tekt1 coding downstream 134130 10509040 ~ 10512788 (-)
LOC103040855 NA coding downstream 827009 9817662 ~ 9819909 (-)
LOC103040551 NA coding downstream 832220 9812342 ~ 9814698 (-)
LOC103040232 samsn1 coding downstream 844238 9766040 ~ 9802680 (-)
LOC103039097 serpinh1b,LOC103039097,LOC108433001,LOC108278262,LOC107588392,LOC107756564,LOC107666206 coding downstream 1034200 9606916 ~ 9612718 (-)
LOC111195508 NA coding upstream 105980 10753104 ~ 10756886 (-)
LOC103043674 dhr13,LOC108427000,LOC107685074,LOC107589701,LOC107756995 coding upstream 425274 11072398 ~ 11076365 (-)
LOC103042223 cryba1a,LOC103042223,LOC108426912,LOC107743738,LOC108278232,LOC105898204 coding upstream 433724 11080848 ~ 11083883 (-)
foxn1 foxn1 coding upstream 473683 11120807 ~ 11135302 (-)
lrrc72 NA coding upstream 657466 11304590 ~ 11308672 (-)
G2761 NA non-coding downstream 147646 10421862 ~ 10499272 (-)
G2733 NA non-coding downstream 349305 10296743 ~ 10297613 (-)
G2731 NA non-coding downstream 358236 10275904 ~ 10288682 (-)
G2712 NA non-coding downstream 362518 10198147 ~ 10284400 (-)
G2835 NA non-coding upstream 136024 10783148 ~ 10783487 (-)
G2837 NA non-coding upstream 136680 10783804 ~ 10784140 (-)
G2857 NA non-coding upstream 350728 10997852 ~ 10998080 (-)
G2865 NA non-coding upstream 423909 11071033 ~ 11071239 (-)
G2881 unc119,LOC103043060 non-coding upstream 445046 11092170 ~ 11112806 (-)
G2783 NA other downstream 64171 10582289 ~ 10582747 (-)
rap1gap2 rap1gap2 other downstream 185058 10247465 ~ 10461860 (-)
hspa13 hspa13,LOC107682527,LOC107666191,LOC107714176 other downstream 891163 9746622 ~ 9755755 (-)
LOC103037880 LOC108432996 other downstream 1513347 9113479 ~ 9133571 (-)
nlk nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 other downstream 1554806 8953877 ~ 9092112 (-)
LOC103025442 lhx1a,LOC108427001,LOC108277614,LOC107743643,LOC105897175,LOC107669762,LOC107589700 other upstream 7734 10654858 ~ 10684465 (-)
sarm1 sarm1,LOC107669752,LOC107743642,LOC107756984,LOC107685076 other upstream 634085 11281209 ~ 11293882 (-)
LOC111192956 LOC108412924,LOC108444125,LOC108444119,LOC108416439 other upstream 1276878 11924002 ~ 11940744 (-)
G3297 sacs,LOC107593479,LOC107740366,LOC107670382 other upstream 2093020 12740144 ~ 12758513 (-)
sgcg sgcg other upstream 2111942 12759066 ~ 12781165 (-)

Expression


Co-expression Network