G3612


Basic Information

Item Value
gene id G3612
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 14283623 ~ 14284225 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU4805
CTCGCTGGCCGAGAGCTCCTTCTCCAGCTGCCGGTATTTGTTGTGCCAGACGAGGTAATGGAGGCGGTAGCGACTCTTCTCCGGAGTTTTTCTGGCAGAAATCATCCTCGGATCATACTTTGCTGCTCTCCCCTCTGTTTTAGTCAGTTTTCTTCCGCTGTACTTTGGGAGAAGGTGGGCTATTTTATTGCTAGCGCTGCTGTTAAGGGAATTTTTCTCCCCTCGTGCAATAATAAACAGCACAGACTCCTCATAGTAAAGTCCAAATACGAGATTCGAAAACGTCTGAACACAGGATGGGTTTTGCCAGCTAACTCAAAGCCACCGCCATCTGTGTAcgcctgcctctctctctctctctctctctctgtgagcAGTCTGTCACTTTCCAAGCCAAAAGGAGGTAAAAATAAATCGACGCCTGTATGAGCGCAGTCCCTCACTTGCTGCCGTCCTTTTAGTGATCATGCGATGGAtagatgctctctctctttctctttctctctctctccacctctctgcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4805 True 525 TUCP 0.43 2 14283623 14284225

Neighbor

gene id symbol gene type direction distance location
git1 git1,LOC107685085,LOC107669736,LOC107548582,LOC105889552,LOC106580798 coding downstream 4333 14255315 ~ 14279290 (-)
LOC103035060 LOC108440363 coding downstream 114685 14138449 ~ 14168938 (-)
LOC103025751 LOC108427003,LOC107730853,LOC107582235,LOC107683286,LOC108277959 coding downstream 533344 13734473 ~ 13750279 (-)
LOC103043894 LOC108426997,LOC107589740 coding downstream 570248 13703983 ~ 13713375 (-)
myo1c myo1c,LOC107756890,LOC107743634 coding downstream 624699 13591095 ~ 13658924 (-)
LOC103037230 ssh2,LOC108440358 coding upstream 47580 14331805 ~ 14364469 (-)
blmh blmh,LOC107743628 coding upstream 130029 14414254 ~ 14435382 (-)
LOC103039849 cd3eap coding upstream 233710 14517935 ~ 14520858 (-)
LOC103040167 gpr4,LOC108278409,LOC107743733,LOC107669721,LOC107548551 coding upstream 256182 14540407 ~ 14577509 (-)
LOC103040481 eml2,LOC108277999,LOC107685092,LOC107669753 coding upstream 308800 14593025 ~ 14630713 (-)
G3610 NA non-coding downstream 35764 14247642 ~ 14247859 (-)
G3469 NA non-coding downstream 562598 13680519 ~ 13721025 (-)
G3474 NA non-coding downstream 591741 13689761 ~ 13691882 (-)
G3459 prpf8 non-coding downstream 609051 13674108 ~ 13674572 (-)
LOC111197623 NA non-coding downstream 898676 13381254 ~ 13384947 (-)
G3621 NA non-coding upstream 77775 14362000 ~ 14363072 (-)
LOC107197060 NA non-coding upstream 84988 14369213 ~ 14371084 (-)
LOC111190767 NA non-coding upstream 153446 14437671 ~ 14513968 (-)
G3631 NA non-coding upstream 189860 14474085 ~ 14475176 (-)
G3668 NA non-coding upstream 249518 14533743 ~ 14790620 (-)
LOC111189390 NA other downstream 150386 14124173 ~ 14133237 (-)
slc43a2 slc43a2,LOC107685082,LOC107548581,LOC107589710 other downstream 711251 13544500 ~ 13572372 (-)
LOC111197384 NA other downstream 1147982 13130212 ~ 13135641 (-)
sgcg sgcg other downstream 1502458 12759066 ~ 12781165 (-)
G3297 sacs,LOC107593479,LOC107740366,LOC107670382 other downstream 1525110 12740144 ~ 12758513 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other upstream 96530 14380755 ~ 14471752 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other upstream 1993780 16278005 ~ 16282632 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other upstream 2360267 16644492 ~ 16653968 (-)
LOC103040336 mpzl2 other upstream 3699660 17983885 ~ 17998749 (-)
G4621 NA other upstream 3746137 18030362 ~ 18040766 (-)

Expression


Co-expression Network