G4319


Basic Information

Item Value
gene id G4319
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 17071972 ~ 17072188 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU5850
gggcttaacaagaactgtccctgtggtcttccatttccttactatgttcctcacagtggaaactgacaggttaaatctctgagacaactttttgtatccttcccttgaacaactatgttgaacaatctttgtttttagatcatttgagagttgttttgatgagcccatgatgccactcttcagaggagattcaaataggagaacaacttgcaattgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5850 True 217 lncRNA 0.38 1 17071972 17072188

Neighbor

gene id symbol gene type direction distance location
zc3h4 zc3h4,LOC107683834,LOC107601737,LOC107690443,LOC107718283,LOC107585556 coding downstream 385788 16674101 ~ 16686184 (-)
LOC103043199 NA coding downstream 413292 16656235 ~ 16658680 (-)
LOC103044128 ckm,ckmb,LOC107690449,LOC107718278,LOC107601735 coding downstream 448988 16619111 ~ 16622984 (-)
LOC103030646 NA coding downstream 524232 16542948 ~ 16547740 (-)
LOC103047885 NA coding downstream 620970 16439618 ~ 16451002 (-)
LOC103041159 NA coding upstream 810588 17882776 ~ 17914128 (-)
mpzl3 NA coding upstream 872886 17945074 ~ 17975882 (-)
LOC103039101 tmem25 coding upstream 975349 18047537 ~ 18060269 (-)
sik3 sik3 coding upstream 995691 18067879 ~ 18118621 (-)
LOC107196958 NA coding upstream 1103586 18175774 ~ 18181003 (-)
G4312 NA non-coding downstream 34326 17037236 ~ 17037646 (-)
G4291 NA non-coding downstream 119337 16952360 ~ 16952635 (-)
G4286 NA non-coding downstream 142286 16929468 ~ 16929686 (-)
G4284 sae1,LOC107718284 non-coding downstream 380163 16689262 ~ 16691809 (-)
G4261 NA non-coding downstream 453051 16618043 ~ 16618921 (-)
G4332 NA non-coding upstream 72710 17144898 ~ 17145212 (-)
G4335 NA non-coding upstream 82681 17154869 ~ 17155096 (-)
G4338 NA non-coding upstream 85431 17157619 ~ 17157851 (-)
G4478 NA non-coding upstream 265863 17338051 ~ 17338268 (-)
G4479 NA non-coding upstream 289625 17361813 ~ 17362236 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other downstream 418004 16644492 ~ 16653968 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other downstream 789340 16278005 ~ 16282632 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other downstream 2600220 14380755 ~ 14471752 (-)
G3612 NA other downstream 2787747 14283623 ~ 14284225 (-)
LOC111189390 NA other downstream 2938735 14124173 ~ 14133237 (-)
LOC103040336 mpzl2 other upstream 911697 17983885 ~ 17998749 (-)
G4621 NA other upstream 958174 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 1124392 18196580 ~ 18226004 (-)
LOC103038769 NA other upstream 2567177 19639365 ~ 19648822 (-)
LOC103038464 NA other upstream 2580598 19652786 ~ 19655913 (-)

Expression


Co-expression Network