G4338


Basic Information

Item Value
gene id G4338
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 17157619 ~ 17157851 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU5869
ttaacccttgtgtggtgttcatatttttgttactcgtttactttgttacttgtatttaattcagcaaaattaagcaattttacattaaaatgctttacacatgcttgcttcacctaaactgcaagcaatataaacagcttacatggttaatatttgccctttacctttcttatgttacatttcttttaaaaagtgctactctttttttattagttttttaataaaatgtaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5869 True 233 lncRNA 0.27 1 17157619 17157851

Neighbor

gene id symbol gene type direction distance location
zc3h4 zc3h4,LOC107683834,LOC107601737,LOC107690443,LOC107718283,LOC107585556 coding downstream 471435 16674101 ~ 16686184 (-)
LOC103043199 NA coding downstream 498939 16656235 ~ 16658680 (-)
LOC103044128 ckm,ckmb,LOC107690449,LOC107718278,LOC107601735 coding downstream 534635 16619111 ~ 16622984 (-)
LOC103030646 NA coding downstream 609879 16542948 ~ 16547740 (-)
LOC103047885 NA coding downstream 706617 16439618 ~ 16451002 (-)
LOC103041159 NA coding upstream 724925 17882776 ~ 17914128 (-)
mpzl3 NA coding upstream 787223 17945074 ~ 17975882 (-)
LOC103039101 tmem25 coding upstream 889686 18047537 ~ 18060269 (-)
sik3 sik3 coding upstream 910028 18067879 ~ 18118621 (-)
LOC107196958 NA coding upstream 1017923 18175774 ~ 18181003 (-)
G4335 NA non-coding downstream 2523 17154869 ~ 17155096 (-)
G4332 NA non-coding downstream 12407 17144898 ~ 17145212 (-)
G4319 NA non-coding downstream 85431 17071972 ~ 17072188 (-)
G4312 NA non-coding downstream 119973 17037236 ~ 17037646 (-)
G4291 NA non-coding downstream 204984 16952360 ~ 16952635 (-)
G4478 NA non-coding upstream 180200 17338051 ~ 17338268 (-)
G4479 NA non-coding upstream 203962 17361813 ~ 17362236 (-)
G4480 NA non-coding upstream 208996 17366847 ~ 17367237 (-)
G4499 NA non-coding upstream 689908 17847759 ~ 17851443 (-)
G4513 NA non-coding upstream 846240 18004091 ~ 18009184 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other downstream 503651 16644492 ~ 16653968 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other downstream 874987 16278005 ~ 16282632 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other downstream 2685867 14380755 ~ 14471752 (-)
G3612 NA other downstream 2873394 14283623 ~ 14284225 (-)
LOC111189390 NA other downstream 3024382 14124173 ~ 14133237 (-)
LOC103040336 mpzl2 other upstream 826034 17983885 ~ 17998749 (-)
G4621 NA other upstream 872511 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 1038729 18196580 ~ 18226004 (-)
LOC103038769 NA other upstream 2481514 19639365 ~ 19648822 (-)
LOC103038464 NA other upstream 2494935 19652786 ~ 19655913 (-)

Expression


Co-expression Network