G4513


Basic Information

Item Value
gene id G4513
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 18004091 ~ 18009184 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU6065
AATCTCTATATTCCCCGGGTTTGCGACGGCCAGAGGAAATGCGATGAGCACAAAGAGACAGGTCAGCTCGCATCCAttcatcttttctttttctcttcttcttcttcttcttcttgattttatcttttattttcttacgAAATAAATTCTTCTCTGTAAAGTTCAGCGTTCTTCACAAACGTTGAGCGTCCGGACCATTCGGTGGAGTTTGGATTGCAGAGATTTTGTGTTCCTCTGTTTGTCCTCCTGAGtacctctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6065 True 262 lncRNA 0.42 2 18004091 18009184

Neighbor

gene id symbol gene type direction distance location
mpzl3 NA coding downstream 28209 17945074 ~ 17975882 (-)
LOC103041159 NA coding downstream 89963 17882776 ~ 17914128 (-)
zc3h4 zc3h4,LOC107683834,LOC107601737,LOC107690443,LOC107718283,LOC107585556 coding downstream 1317907 16674101 ~ 16686184 (-)
LOC103043199 NA coding downstream 1345411 16656235 ~ 16658680 (-)
LOC103044128 ckm,ckmb,LOC107690449,LOC107718278,LOC107601735 coding downstream 1381107 16619111 ~ 16622984 (-)
LOC103039101 tmem25 coding upstream 38353 18047537 ~ 18060269 (-)
sik3 sik3 coding upstream 58695 18067879 ~ 18118621 (-)
LOC107196958 NA coding upstream 166590 18175774 ~ 18181003 (-)
cep164 cep164 coding upstream 178662 18187846 ~ 18202965 (-)
LOC103030909 LOC108443025 coding upstream 194861 18204045 ~ 18210644 (-)
G4499 NA non-coding downstream 152648 17847759 ~ 17851443 (-)
G4480 NA non-coding downstream 636854 17366847 ~ 17367237 (-)
G4479 NA non-coding downstream 641855 17361813 ~ 17362236 (-)
G4478 NA non-coding downstream 665823 17338051 ~ 17338268 (-)
G4338 NA non-coding downstream 846240 17157619 ~ 17157851 (-)
LOC111192371 NA non-coding upstream 21813 18030997 ~ 18034451 (-)
LOC111192372 NA non-coding upstream 25288 18034472 ~ 18040751 (-)
G4619 NA non-coding upstream 53977 18063161 ~ 18066938 (-)
G4638 NA non-coding upstream 121657 18130841 ~ 18132384 (-)
G4644 NA non-coding upstream 148023 18157207 ~ 18158131 (-)
LOC103040336 mpzl2 other downstream 5342 17983885 ~ 17998749 (-)
ercc2 ercc2,LOC107743694,LOC107601732 other downstream 1350123 16644492 ~ 16653968 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other downstream 1721459 16278005 ~ 16282632 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other downstream 3532339 14380755 ~ 14471752 (-)
G3612 NA other downstream 3719866 14283623 ~ 14284225 (-)
G4621 NA other upstream 21178 18030362 ~ 18040766 (-)
LOC103031959 NA other upstream 187396 18196580 ~ 18226004 (-)
LOC103038769 NA other upstream 1630181 19639365 ~ 19648822 (-)
LOC103038464 NA other upstream 1643602 19652786 ~ 19655913 (-)
LOC111192876 NA other upstream 2477410 20486594 ~ 20492524 (-)

Expression


Co-expression Network