LOC103028190 (LOC103028190)


Basic Information

Item Value
gene id LOC103028190
gene name LOC103028190
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 4334848 ~ 4338794 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237711.3
CGCACAGCAGCAGGGCCTAATCACACCAGCCTGAGAAGCAAACAGCTTTATCACTCAGAACTAATTTACTTATTAcagaatctttattttaatctagctttatttcatttaatctaGCAGTTAATTCAGTGAGTGATTCAGTGAAAGTGAGTCAGTAAGAGTGAGTCAGTGATTTAGTCAGAGTGATTCAGTGAGAGCAGAAGCGGAACCATGCTGAGACACTGCGGATTTTGCGGGTCCAGGGGAATTTTTCAGAGTCGGACCGACTTCCTGCACAGCGAGGCCGGCATGTCTGTCGTTCGAcgagccgctgcgctcctcACATTATCCAGgGGAGCGACGACCGCCCTCTGCAGCAACCGGAAATCTGCCCGCCAGCTGCTGCGCATGCCTGCATCCTCAAAAACGCACGCCGCTGGGTTCAGCATCGCGAGCACACTCTGCTCCGTGCCCTTCATACAGCACAACGAAAACCTTTCTCACGAGTCGCTAATCCGCCGGGCATCCTGCCTGCTCACCGACAGCGCCAACACCTACCTGTCGCAGACCACGCTGGCCCTCTCCGACGCCCTCACCCTCTACACCACAgCTCTGCACACTCTGATCGCTCTGCAGAAGCGATATCTGAACTCTATAGGGAAGCTCACGCCTGCAGAGGAGGACAGTATCTGGCAGGTGATCATCGGTCAGAGAGTTGAGGTGAGCGAGCGGCTGGATGAATGTACGCGCTTCGAGTCGAGTTGGGTGACCGCGGTCGGGCTGTGTGAGCTGGCGGTGGAGGCAGCGTATAACTCAGGGGCAGAACATGCGTCCATGGCACTGAAGAACGGCCTGCAGGTGGCGCAGTCGAAGGTACAGGAGATGCGGGAGCTGCGGGCGGTGGCAGAGAAGAGCCTGGCGGAGATTAAAGCCGAGGAGATCCAGCGCATGGCAGAGTATGCGTCCAGCATCAAGCGGCAAGACCTGGAGGACATTCCCGAGGCCTACCTCCGCGAGGACTGAGCAGCAGAACCGGGACAGAGAGGAGAACCTCAGGAAGAACTGAACTGAGAACTAAGCTCTCTTCACTCTGAGAGCATCATCGAGGATCGCAGCATTGCCTGAGTAAAAAATCCAGGGGGATTGGCCATGTCATTATGTGTTTGATTATATTAAGGGGAAAAGAACATCTTTATGGTTTATTTTGAACTAAAAAGGAATCAGTCAGTCATTTCTCTGCAGAATTTTCTGATTATGATATTTgagaaatcatattttcatgCTCCGTTAGGATTCTAATCAACCGTCTAATAATAATggaataatactttttttttttttaagaacctcTATCAAATGTGTGAGACAATAAAATCAGAACTCAAACCAcaaatgcaattaaaaacaatgttgtAAAAAGTTCTGtaattgcaaaaatatattatgcTAAAATCAATGTTTGTTCTCAAATTCCACCAAAAACTGCACGTGTTTAgagtaatttaaatattaaca

Function

NR:

description
diablo homolog, mitochondrial-like

GO:

id name namespace
GO:0006915 apoptotic process biological_process

KEGG:

id description
K10522 DIABLO, SMAC; diablo

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237711.3 True 1494 mRNA 0.49 6 4334848 4338794

Neighbor

gene id symbol gene type direction distance location
LOC111193765 NA coding downstream 97403 4220875 ~ 4237445 (-)
LOC103027148 NA coding downstream 113932 4214015 ~ 4220916 (-)
dnhd1 NA coding downstream 127325 4149693 ~ 4207523 (-)
med29 med29 coding downstream 207622 4122118 ~ 4127226 (-)
LOC111193716 NA coding downstream 282065 4052487 ~ 4052783 (-)
LOC111192761 NA coding upstream 48453 4387247 ~ 4388980 (-)
LOC111192762 NA coding upstream 53152 4391946 ~ 4393659 (-)
LOC107197778 NA coding upstream 396244 4735038 ~ 4747924 (-)
irs1 irs1,LOC107577679 coding upstream 566947 4905741 ~ 4943017 (-)
LOC103027032 NA coding upstream 634752 4973546 ~ 5101897 (-)
G1353 NA non-coding downstream 58054 4275838 ~ 4276794 (-)
G1324 NA non-coding downstream 172975 4161479 ~ 4161873 (-)
G1323 NA non-coding downstream 178008 4156601 ~ 4156840 (-)
G1301 NA non-coding downstream 253065 4079537 ~ 4081783 (-)
G1290 NA non-coding downstream 324968 4006162 ~ 4009880 (-)
G1363 NA non-coding upstream 16079 4354873 ~ 4355132 (-)
G1374 NA non-coding upstream 41804 4380598 ~ 4381126 (-)
G1385 NA non-coding upstream 307987 4646781 ~ 4655868 (-)
G1399 NA non-coding upstream 344440 4683234 ~ 4683540 (-)
G1414 NA non-coding upstream 366793 4705587 ~ 4705946 (-)
LOC111193783 LOC108442858 other downstream 13508 4276909 ~ 4321340 (-)
LOC111193794 LOC108442858 other downstream 62878 4267001 ~ 4271970 (-)
G1308 NA other downstream 233282 4099765 ~ 4101566 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other downstream 425177 3882370 ~ 3909671 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other downstream 889462 3394204 ~ 3445386 (-)
LOC103031123 LOC108411357 other upstream 1364912 5703706 ~ 5721108 (-)
nlk nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 other upstream 4615083 8953877 ~ 9092112 (-)
LOC103037880 LOC108432996 other upstream 4774685 9113479 ~ 9133571 (-)
hspa13 hspa13,LOC107682527,LOC107666191,LOC107714176 other upstream 5407828 9746622 ~ 9755755 (-)
rap1gap2 rap1gap2 other upstream 5908671 10247465 ~ 10461860 (-)

Expression


Co-expression Network