LOC103047661 (LOC101071669,LOC106934088,LOC102221054)


Basic Information

Item Value
gene id LOC103047661
gene name LOC101071669,LOC106934088,LOC102221054
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 13484174 ~ 13513361 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260894.3
ACAGTTTCGCTATAGCgatattctttttatttactacCCGTATTCTAACAGACCACGCCCCAAATCGCCTTGTGCGCTTCTAACCAATCCGAACGCAGGACGAGCGACAGCAGTAGCCAATCCTCGAATAGAATGCAAAACTGCCACGCATACTCTGAGCAGAGCTGAGGACGTAGTGGTTTGTATTGGAACCGCTAGCCAATCACAGCGAGTGTAGGCGGTGCTTGTCAGAATATGGGTGGGGAAAAGTGGAGCTGATGGCCACACATTCATGTATCGAGCTGCACAGACACTCGGAGTGGAGAGCAGTGTGGCGGTGCGACCGGCTTGTTGTACTTAAATAGGCCAGAAATCTGCTCTGGCTGTAACATTACTGCACATTATTCAGATTTATATCAGTTTGAAATGAGTATGGGCCGGATATGAGGGAGAATACGCCCAATGTTGCGTTAAATTTGGGCTTAACATAACGTTAAGTGACTGTTAACCGCCGGTTATTTCTCCTGGCTTTCGCGTATAGAGGAGATTTTACATATGCCCACGATGGATCCATAATCCAGGATAAAGCTCCAAAAAGCTCGTGGTGTCTTTTTGCATCTGTGGCTTGAAAGTTTCTGGCTGGACATGGTCGCGTGGCTCGGTGCTAACAGCGCCGCCAGTTGTGCAGCACGCAGCCATGTGTACGAGCGATCTGGTAGAAAATGAGGATTGGACGTGAGCTACGTGCGCATCTGGGAGGAGACGAGATTAAATGGAGAGCTTGGGCAGCGCGGACCTTGTAGAAGAAAGAAGCCACTCTTGCGGAAACACCAGCGTTTGCTCCAAGCCAGAGAAAGAGGCCCACGGCTCGACTGAGAAAGGAGGACATGCGGTGGTGAACATGGGGCTGAAGGCTTACTGCATGCCCGCGGCTGGGAGCAGCACGGCAGCTGAGCTGCTGGCTGACCTGGCGTCTAAAACAGTGGGGCCTGGGatcactgtgctgaagaaaGAGTCCAAAACCGGCGTGCCCTTGTGCAATGGAGGGGTGCTCCCCCCAACAGCCACTACTGAGGCCAGCCACTCGGGGCTCCCACCGGCCCATACCCCAAATGGTTATAGGCAGGTAAAAGGACTGGCTGAAACTCAGAATGGCTTCATGCTGAGAACAGTGGAAAGCTCAGTACATGAAAAATGCCCACCACTTGTGACAAAGCGAGCAAATGGGGATTTAAAATGCAGGCAGCCTCAGCATCAGAGACGGAAAGATGATGAGAGTAGGGCCACGGGCTCCTGGGCTTCTGGCTCTCTGGATGGAGCCAGTTCGGGAGTAGGATCATCATCGGGATCCCATGCTTTAGAAGTACCCAATGGGTTGGACCCTTGTCCGCCTCCAGAATGCAAAAGGAGGAGGGTAGAGGCCGAGGCGAAAACAGAGAGTGGAAAAAGCACACAAGCGGTAGTGACCTTTGCACCCAACAGCCAGCAGCACCACAGTCATAGCAGCAATTCCTTTACTATGTCATCTTCACCCAACAGAGTCATccaccacaacaacaacaacaacagacacAAATTAACATGGAATGGCACACTGGCAAATGGGTCCGCACCCTCAGTGACTTCAGGGATGGGAGCTGCCGATGGTTGGTCTGCAGAGCGCATCGCCCAGCTGTACATAGTGCCTTGTATGAAATACTATGGCATCTGTGTTAAAGATGGCTTCTTAGGTCCACGCTTGGGGGACCAGGTCCTAAAAGAAGTGGAGACGCTGAATCAGAGTGGGAAGTTTCGTGGGGGGCAGCTGGTGAGCCAGAGGAGCATCCCCTCTAAAAACATCCGAGGAGACCAGATAGCTTGGGTGGAGGGTAAAGAACCCGGCTGTGAAAGTATTGGCATCCTCATGGCACACATCGATGAGGCCATCATGCACAGTTCTGCCAAGGGCCAGCTTGGGGATTATGTCATTAATGGCCGCACTAAGGCTATGGTGGCGTGTTACCCTGGCAACGGCACAAGATACGTGCGTCACGTGGATAATCCGAACGGAGATGGGCGCTGCATTACCTGTATCTACTATCTGAATAAGGACTGGGACGTGAAGGTGCATGGGGGCATGCTGCAGCTATACCCTGAGGGGCGAAATGTCGTTGCCAACATAGAACCGCTCTTCGACCGCTTGCTTATTTTCTGGTCGGACCGGCGGAACCCTCATGAAGTCAAACCAGCCTACGCCACACGCTATGCCATCACAGTTTGGTACTTTGATGcaaaggagcgggctgaggccAAGGAAAAGTACAGACTCGCTGCGGGACAGAAAGGGGTGGAGGTACGGGTTTCTCAAAGCAACAACACCTAAAATCTCACCAGCTCAGGGCAGCACAGTGTGTCCTTCCGAATACGTGCCTACTCGCACTGTTACCTGAACAACTGTTTTCAAGGGGAGACATGGAGAGAGTGCATGATGGGCAGCTAAGGCCAATACAGCCAGACAATCCCGGCAACTCCTCGGACTAGACCTCGGACTAACCAATCAGACACTTGGGTGAGACTCTGTTGGCCGCCGGAGAGACCGGGAGGATGCTGAGCATATACGGAGGATCGCTATTGAATTGGTCACTGATTCTGTCAGTCACACACAGCTTGGCCGTGATTGAAAAGCTGAAAACGTGTGGATTTTTCTCACTTCACACGAACATGCCAAAATGTTTGCCAGAGGACCGTTATTGGACCTTTTTGCCTCTTTGTATTAAgtactgttttcttttatttgttgaaTAGTAAGAAATAAGCTTCTCTCTGGTCACACATGCTCCTTATATAATAAGTATTAGCATGTCCTTACGGAGAATACAGCTGTGACTCTACCAGAATggaaggagaagagaagaaaaggaacAAGACCTCAGCAGACTTTGTCCTAACCATATCATAGCCTCAATAAGGGAACAGTGTTAATGGGGAGCACTACCgattaaacaaatgaaaaataaattaactacaCCTAGATTGAcacctgactaaaacacagtaTCTGGCAAGGTTTGGAGACATTTCAGAGTGTGCACAGAACCTTAAGACTGCTGGTACTGAGAGCAAAAGCTTAGACAGTTGCCCAAACATCCCATCAACTCAGATCAGAGCATTCACGGTCAAGCATGCCTCCACTAATACACCCCAAGTGTGTATAACCTGGAGAACACATTACCACAGGAGTACAGCAGGAGGGTCAAAACAGGGTTCGCTGAATGTgaccttttttatttgtgtgtatgtgtgcgtgtgggcatatgtgtgtgtgttttatcaagtgAGAATTTTAGCTAGTCTATCATGGCCTACCCTTGCCTGTAACAAATGTAACAAACTAAATGGCCTTCTGTTCTCGTTAGGAAGCACAGACGAAGTGAAGTTTGAAACAGATCTATGCTAGTATGCCTTTAATAGGTCTCTCCTCGAGACTTCATGGTGATGCACTTGCCTGAGTCATCTTCAGAAATAGTGAGCTGACTGTTTCTTATTCCTATAGTCTAAACAAATATGGCTTATTCTTCAGTGCTTAAGCTCATCAGGTCAGCACAGAAAACGAACATCTGCTGTTTCTCTGCTAGGACTCTAGACTAGCCGCTCTATCCTTGTGCCTATGTTTCCAAGAAGGCGCTGCATGTTCAAATGCAGAATAGTAGAGGAACTGAAGTGAATATGGAACCGGGGTAAATAAAACTGTCAGGATAAAGATGCAACACctacaaaccaacaaacaactGCAAAAGTTGGGTAACCTGGTCAAATtacacatttgtgtttttttttaaacagtcctGTTATGTTGTGGGTTAAGCAAACAAACAGGGTGTGTGATAAACATTcaattcagaaaaaaaggataaattaaaaatatatatattttctgaataAGGCATGCCTTAAATTATCATAAATAAACCATGATCTGCAAGGAATGCACAAAATatgtcttaagccctatccagacaggattagtttttcagggggacatatgtgaaaaatatttcacacttctactcagtaa
>XM_022687165.1
ACAGTTTCGCTATAGCgatattctttttatttactacCCGTATTCTAACAGACCACGCCCCAAATCGCCTTGTGCGCTTCTAACCAATCCGAACGCAGGACGAGCGACAGCAGTAGCCAATCCTCGAATAGAATGCAAAACTGCCACGCATACTCTGAGCAGAGCTGAGGACGTAGTGGTTTGTATTGGAACCGCTAGCCAATCACAGCGAGTGTAGGCGGTGCTTGTCAGAATATGGGTGGGGAAAAGTGGAGCTGATGGCCACACATTCATGTATCGAGCTGCACAGACACTCGGAGTGGAGAGCAGTGTGGCGGTGCGACCGGCTTGTTGTACTTAAATAGGCCAGAAATCTGCTCTGGCTGTAACATTACTGCACATTATTCAGATTTATATCAGTTTGAAATGAGTATGGGCCGGATATGAGGGAGAATACGCCCAATGTTGCGTTAAATTTGGGCTTAACATAACGTTAAGTGACTGTTAACCGCCGGTTATTTCTCCTGGCTTTCGCGTATAGAGGAGATTTTACATATGCCCACGATGGATCCATAATCCAGGATAAAGCTCCAAAAAGCTCGTGGTGTCTTTTTGCATCTGTGGCTTGAAAGTTTCTGGCTGGACATGGTCGCGTGGCTCGGTGCTAACAGCGCCGCCAGTTGTGCAGCACGCAGCCATGTGTACGAGCGATCTGGTAGAAAATGAGGATTGGACGTGAGCTACGTGCGCATCTGGGAGGAGACGAGATTAAATGGAGAGCTTGGGCAGCGCGGACCTTGTAGAAGAAAGAAGCCACTCTTGCGGAAACACCAGCGTTTGCTCCAAGCCAGAGAAAGAGGCCCACGGCTCGACTGAGAAAGGAGGACATGCGGTGGTGAACATGGGGCTGAAGGCTTACTGCATGCCCGCGGCTGGGAGCAGCACGGCAGCTGAGCTGCTGGCTGACCTGGCGTCTAAAACAGTGGGGCCTGGGatcactgtgctgaagaaaGAGTCCAAAACCGGCGTGCCCTTGTGCAATGGAGGGGTGCTCCCCCCAACAGCCACTACTGAGGCCAGCCACTCGGGGCTCCCACCGGCCCATACCCCAAATGGTTATAGGCAGGTAAAAGGACTGGCTGAAACTCAGAATGGCTTCATGCTGAGAACAGTGGAAAGCTCAGTACATGAAAAATGCCCACCACTTGTGACAAAGCGAGCAAATGGGGATTTAAAATGCAGGCAGCCTCAGCATCAGAGACGGAAAGATGATGAGAGTAGGGCCACGGGCTCCTGGGCTTCTGGCTCTCTGGATGGAGCCAGTTCGGGAGTAGGATCATCATCGGGATCCCATGCTTTAGAAGTACCCAATGGGTTGGACCCTTGTCCGCCTCCAGAATGCAAAAGGAGGAGGGTAGAGGCCGAGGCGAAAACAGAGAGTGGAAAAAGCACACAAGCGGTAGTGACCTTTGCACCCAACAGCCAGCAGCACCACAGTCATAGCAGCAATTCCTTTACTATGTCATCTTCACCCAACAGAGTCATccaccacaacaacaacaacaacagacacAAATTAACATGGAATGGCACACTGGCAAATGGGTCCGCACCCTCAGTGACTTCAGGGATGGGAGCTGCCGATGGTTGGTCTGCAGAGCGCATCGCCCAGCTGTACATAGTGCCTTGTATGAAATACTATGGCATCTGTGTTAAAGATGGCTTCTTAGGTCCACGCTTGGGGGACCAGGTCCTAAAAGAAGTGGAGACGCTGAATCAGAGTGGGAAGTTTCGTGGGGGGCAGCTGGTGAGCCAGAGGAGCATCCCCTCTAAAAACATCCGAGGAGACCAGATAGCTTGGGTGGAGGGTAAAGAACCCGGCTGTGAAAGTATTGGCATCCTCATGGCACACATCGATGAGGCCATCATGCACAGTTCTGCCAAGGGCCAGCTTGGGGATTATGTCATTAATGGCCGCACTAAGGCTATGGTGGCGTGTTACCCTGGCAACGGCACAAGATACGTGCGTCACGTGGATAATCCGAACGGAGATGGGCGCTGCATTACCTGTATCTACTATCTGAATAAGGACTGGGACGTGAAGGTGCATGGGGGCATGCTGCAGCTATACCCTGAGGGGCGAAATGTCGTTGCCAACATAGAACCGCTCTTCGACCGCTTGCTTATTTTCTGGTCGGACCGGCGGAACCCTCATGAAGTCAAACCAGCCTACGCCACACGCTATGCCATCACAGTTTGGTACTTTGATGcaaaggagcgggctgaggccAAGGAAAAGTACAGACTCGCTGCGGGACAGAAAGGGGTGGAGGTACGGGTTTCTCAAAGCAACAACACCTAAAATCTCACCAGCTCAGGGCAGCACAGTGTGTCCTTCCGAATACGTGCCTACTCGCACTGTTACCTGAACAACTGTTTTCAAGGGGAGACATGGAGAGAGTGCATGATGGGCAGCTAAGGCCAATACAGCCAGACAATCCCGGCAACTCCTCGGACTAGACCTCGGACTAACCAATCAGACACTTGGGTGAGACTCTGTTGGCCGCCGGAGAGACCGGGAGGATGCTGAGCATATACGGAGGATCGCTATTGAATTGGTCACTGATTCTGTCAGTCACACACAGCTTGGCCGTGATTGAAAAGCTGAAAACGTGTGGATTTTTCTCACTTCACACGAACATGCCAAAATGTTTGCCAGAGGACCGTTATTGGACCTTTTTGCCTCTTTGTATTAAgtactgttttcttttatttgttgaaTAGTAAGAAATAAGCTTCTCTCTGGTCACACATGCTCCTTATATAATAAGTATTAGCATGTCCTTACGGAGAATACAGCTGTGACTCTACCAGAATggaaggagaagagaagaaaaggaacAAGACCTCAGCAGACTTTGTCCTAACCATATCATAGCCTCAATAAGGGAACAGTGTTAATGGGGAGCACTACCgattaaacaaatgaaaaataaattaactacaCCTAGATTGAcacctgactaaaacacagtaTCTGGCAAGGTTTGGAGACATTTCAGAGTGTGCACAGAACCTTAAGACTGCTGGTACTGAGAGCAAAAGCTTAGACAGTTGCCCAAACATCCCATCAACTCAGATCAGAGCATTCACGGTCAAGCATGCCTCCACTAATACACCCCAAGTGTGTATAACCTGGAGAACACATTACCACAGGAGTACAGCAGGAGGGTCAAAACAGGGTTCGCTGAATGTgaccttttttatttgtgtgtatgtgtgcgtgtgggcatatgtgtgtgtgttttatcaagtgAGAATTTTAGCTAGTCTATCATGGCCTACCCTTGCCTGTAACAAATGTAACAAACTAAATGGCCTTCTGTTCTCGTTAGGAAGCACAGACGAAGTGAAGTTTGAAACAGATCTATGCTAGTATGCCTTTAATAGGTCTCTCCTCGAGACTTCATGGTGATGCACTTGCCTGAGTCATCTTCAGAAATAGTGAGCTGACTGTTTCTTATTCCTATAGTCTAAACAAATATGGCTTATTCTTCAGTGCTTAAGCTCATCAGGTCAGCACAGAAAACGAACATCTGCTGTTTCTCTGCTAGGACTCTAGACTAGCCGCTCTATCCTTGTGCCTATGTTTCCAAGAAGGCGCTGCATGTTCAAATGCAGAATAGTAGAGGAACTGAAGTGAATATGGAACCGGGGTAAATAAAACTGTCAGGATAAAGATGCAACACctacaaaccaacaaacaactGCAAAAGTTGGGTAACCTGGTCAAATtacacatttgtgtttttttttaaacagtcctGTTATGTTGTGGGTTAAGCAAACAAACAGGGTGTGTGATAAACATTcaattcagaaaaaaaggataaattaaaaatatatatattttctgaataAGGCATGCCTTAAATTATCATAAATAAACCATGATCTGCAAGGAATGCACAAAATatgtcttaagccctatccagacaggattagtttttcagggggacatatgtgaaaaatatttcacacttctactcagtaa

Function

NR:

description
PREDICTED: egl nine homolog 2-like

GO:

id name namespace
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K09592 EGLN, HPH; hypoxia-inducible factor prolyl hydroxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260894.3 True 4033 mRNA 0.48 6 13484174 13513361
XM_022687165.1 False 4033 mRNA 0.48 6 13484174 13512450

Neighbor

gene id symbol gene type direction distance location
tmem160 tmem160,LOC106537151 coding downstream 16482 13459700 ~ 13467692 (-)
ap2s1 ap2s1 coding downstream 319069 13153019 ~ 13165105 (-)
LOC103022701 tnfrsf19,LOC108415268,LOC103474716 coding downstream 778065 12668035 ~ 12706109 (-)
LOC103022193 LOC107699842,LOC107592657,LOC107555278 coding downstream 857720 12615654 ~ 12626454 (-)
gbe1 gbe1,gbe1b,LOC107752276,LOC102793958 coding downstream 1269433 12018015 ~ 12214741 (-)
LOC103047347 pitpna,LOC107685084,LOC107743636,LOC107548584,LOC107756865 coding upstream 13058 13526419 ~ 13541264 (-)
LOC103046123 NA coding upstream 61413 13574774 ~ 13581467 (-)
myo1c myo1c,LOC107756890,LOC107743634 coding upstream 77734 13591095 ~ 13658924 (-)
LOC103043894 LOC108426997,LOC107589740 coding upstream 190622 13703983 ~ 13713375 (-)
LOC103025751 LOC108427003,LOC107730853,LOC107582235,LOC107683286,LOC108277959 coding upstream 221112 13734473 ~ 13750279 (-)
LOC111197623 NA non-coding downstream 99227 13381254 ~ 13384947 (-)
G3356 NA non-coding downstream 333170 13147138 ~ 13151004 (-)
G3354 NA non-coding downstream 387980 13095478 ~ 13096194 (-)
G3337 NA non-coding downstream 449095 13034489 ~ 13035079 (-)
G3324 NA non-coding downstream 484534 12999136 ~ 12999640 (-)
G3459 prpf8 non-coding upstream 160747 13674108 ~ 13674572 (-)
G3469 NA non-coding upstream 167158 13680519 ~ 13721025 (-)
G3474 NA non-coding upstream 176400 13689761 ~ 13691882 (-)
G3610 NA non-coding upstream 734281 14247642 ~ 14247859 (-)
LOC111190296 NA non-coding upstream 767671 14281032 ~ 14318897 (-)
LOC111197384 NA other downstream 348533 13130212 ~ 13135641 (-)
sgcg sgcg other downstream 703009 12759066 ~ 12781165 (-)
G3297 sacs,LOC107593479,LOC107740366,LOC107670382 other downstream 725661 12740144 ~ 12758513 (-)
LOC111192956 LOC108412924,LOC108444125,LOC108444119,LOC108416439 other downstream 1543430 11924002 ~ 11940744 (-)
sarm1 sarm1,LOC107669752,LOC107743642,LOC107756984,LOC107685076 other downstream 2190292 11281209 ~ 11293882 (-)
slc43a2 slc43a2,LOC107685082,LOC107548581,LOC107589710 other upstream 31139 13544500 ~ 13572372 (-)
LOC111189390 NA other upstream 610812 14124173 ~ 14133237 (-)
G3612 NA other upstream 770262 14283623 ~ 14284225 (-)
slc6a4 slc6a4,slc6a4a,LOC107743629,LOC107669739,LOC107548586,LOC107756784,LOC107589714,LOC107685089 other upstream 867394 14380755 ~ 14471752 (-)
LOC103022652 LOC103022652,LOC108425821,LOC108277503 other upstream 2764644 16278005 ~ 16282632 (-)

Expression


Co-expression Network