LOC111193765


Basic Information

Item Value
gene id LOC111193765
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 4220875 ~ 4237445 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675712.1
CATCACCTGGTCCCTCAGTAAAGCTTCAGAATGGCTCTGCTGATGTTTCTGCTGCTGTGGATGTTCTCAGATTTGTGCCAGAGCTTGGAAAGCCCAGGTCTGGAGAGGAGGGGCATCGTGTTGGAGCAGGATGTGATGGGGGTGCTGGGGGAGGAGGTGTACCTGCGCTGTCTCTACACCGGCAACGAGACCGTCATGTTTTCCACCTGGAACCGAGTTAACTCTGAAACTAACAGCGTAATGATGTCCGGCTTTAAATACGCCAATAAGGCCTTCAGCAAGGAGAGCTTCTCCATCCCAGAATCCCAAACCAACCTCACTGTGAAGGTGGGCATCACCAGCGTAACTATGGAGGGGCGATATGACTGTGCCTTCACCTTggaagaaaatataataaaggagagCCTGTTCCTCACTGTCAATGtccggCCTGAAATCATAACCCGAGTGGAGGAGGACGTTGTGAACGGAACTCTTTACCAGACCGTCCACTGCTCAGCCATCAACGCCAAGCCCATGGCTCTGATCCGCTGGGAGATCCGCGGAGTTCCTCCCGACCCAGACGTCTTCTACATCTACACCACCAACTCCACTCATCCCAACAGGACAGGCAGTGTGGTCAGCGTGCTGCGACTCCCCGTCCTGCTGAATAACGAGAGTCGGGTCAGCTGCGTCGTCCAGCACCCGGCTTTACTCAGACCCACTGTTAGTGACGTAGAGTTACAGACGTACATTCCTCCCAGCATCAGTATGAAGATGGAAGTGAAACAGAAGAATGGACAGGACATCCTGCAGGTTCTCTGCTCAGCGACGGGAGGTCGGCCTCAGCCCAACATCATCTGGATCCTGCCCGACTCTGCACCGGCACAACTTCCTCAGAATCCCGAGGTGGAATCTGAATCCATCACCAGCTCTCACTGGTTTCCACCAGATCTGTGTGAAGGAGAAAATATCACCTGTGTTATTGGGTACCCGCTACGCCCTGCTGTACAGACGGAAACCATCACACTGCCAACGTACTATATTACTTCTCTTCAGCTGAAAGGTGGCAGGTCTGAGACGAGCAGTGATAAGACCTCTGATCTGGTGAGATTAGCTGATGGGGATGGAGAGGTCGTTATCAGGATGGAAGTGATTGGGAATGTTCCCAGCTATACAATCAACTGCACCAGGGAAGACGGACCCATGCCTAAAGAAGTGAATGTGGTTGATAGTGATATACTGATTAAAGGTCCTGTGGGTTTCAACATTTCGGGTCAGTATCGGTGCCAGGCCTCCCTACCACAGACACTCTGCCGTCCTGCAGCTCCAGATCGAAGTAAATCCCAGAGTGGAGATACCAGTGACTTTCCCCCCAAACATAAGTGCTCGGCTCTGGACAGAAGGAGCTAACACCTATGTGGAATGCTTGGCGTCCGATGCCGCTCCT
>XM_022675733.1
gacgagagagagagagcgaagcgacaggcgaccattaGTTTCCTATGTCAGCGCAGTGACGGTGTTTGGACAGTTTAAATGATCTGCGATTTTGCGCGCGCTCTCTGCTTGTGAGCATCAGCTTCCAGTCAGAGGTCTGGAGAGGAGGGGCATCGTGTTGGAGCAGGATGTGATGGGGGTGCTGGGGGAGGAGGTGTACCTGCGCTGTCTCTACACCGGCAACGAGACCGTCATGTTTTCCACCTGGAACCGAGTTAACTCTGAAACTAACAGCGTAATGATGTCCGGCTTTAAATACGCCAATAAGGCCTTCAGCAAGGAGAGCTTCTCCATCCCAGAATCCCAAACCAACCTCACTGTGAAGGTGGGCATCACCAGCGTAACTATGGAGGGGCGATATGACTGTGCCTTCACCTTggaagaaaatataataaaggagagCCTGTTCCTCACTGTCAATGtccggCCTGAAATCATAACCCGAGTGGAGGAGGACGTTGTGAACGGAACTCTTTACCAGACCGTCCACTGCTCAGCCATCAACGCCAAGCCCATGGCTCTGATCCGCTGGGAGATCCGCGGAGTTCCTCCCGACCCAGACGTCTTCTACATCTACACCACCAACTCCACTCATCCCAACAGGACAGGCAGTGTGGTCAGCGTGCTGCGACTCCCCGTCCTGCTGAATAACGAGAGTCGGGTCAGCTGCGTCGTCCAGCACCCGGCTTTACTCAGACCCACTGTTAGTGACGTAGAGTTACAGACGTACATTCCTCCCAGCATCAGTATGAAGATGGAAGTGAAACAGAAGAATGGACAGGACATCCTGCAGGTTCTCTGCTCAGCGACGGGAGGTCGGCCTCAGCCCAACATCATCTGGATCCTGCCCGACTCTGCACCGGCACAACTTCCTCAGAATCCCGAGGTGGAATCTGAATCCATCACCAGCTCTCACTGGTTTCCACCAGATCTGTGTGAAGGAGAAAATATCACCTGTGTTATTGGGTACCCGCTACGCCCTGCTGTACAGACGGAAACCATCACACTGCCAACGTACTATATTACTTCTCTTCAGCTGAAAGGTGGCAGGTCTGAGACGAGCAGTGATAAGACCTCTGATCTGGTGAGATTAGCTGATGGGGATGGAGAGGTCGTTATCAGGATGGAAGTGATTGGGAATGTTCCCAGCTATACAATCAACTGCACCAGGGAAGACGGACCCATGCCTAAAGAAGTGAATGTGGTTGATAGTGATATACTGATTAAAGGTCCTGTGGGTTTCAACATTTCGGGTCAGTATCGGTGCCAGGCCTCCCTACCACAGACACTCTGCCGTCCTGCAGCTCCAGATCGAAGTAAATCCCAGAGTGGAGATACCAGTGACTTTCCCCCCAAACATAAGTGCTCGGCTCTGGACAGAAGGAGCTAACACCTATGTGGAATGCTTGGCGTCCGATGCCGCTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675712.1 False 1429 mRNA 0.53 7 4220875 4237445
XM_022675733.1 True 1466 mRNA 0.53 7 4220875 4234769

Neighbor

gene id symbol gene type direction distance location
dnhd1 NA coding downstream 13352 4149693 ~ 4207523 (-)
med29 med29 coding downstream 93649 4122118 ~ 4127226 (-)
LOC111193716 NA coding downstream 168092 4052487 ~ 4052783 (-)
LOC111193700 NA coding downstream 183355 4034456 ~ 4037520 (-)
LOC103026864 LOC107669897 coding downstream 215645 3969220 ~ 4005230 (-)
LOC103028190 LOC103028190 coding upstream 97403 4334848 ~ 4338794 (-)
LOC111192761 NA coding upstream 149802 4387247 ~ 4388980 (-)
LOC111192762 NA coding upstream 154501 4391946 ~ 4393659 (-)
LOC107197778 NA coding upstream 497593 4735038 ~ 4747924 (-)
irs1 irs1,LOC107577679 coding upstream 668296 4905741 ~ 4943017 (-)
G1324 NA non-coding downstream 59002 4161479 ~ 4161873 (-)
G1323 NA non-coding downstream 64035 4156601 ~ 4156840 (-)
G1301 NA non-coding downstream 139092 4079537 ~ 4081783 (-)
G1290 NA non-coding downstream 210995 4006162 ~ 4009880 (-)
G1267 NA non-coding downstream 339144 3879564 ~ 3881731 (-)
G1353 NA non-coding upstream 38393 4275838 ~ 4276794 (-)
G1363 NA non-coding upstream 117428 4354873 ~ 4355132 (-)
G1374 NA non-coding upstream 143153 4380598 ~ 4381126 (-)
G1385 NA non-coding upstream 409336 4646781 ~ 4655868 (-)
G1399 NA non-coding upstream 445789 4683234 ~ 4683540 (-)
G1308 NA other downstream 119309 4099765 ~ 4101566 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other downstream 311204 3882370 ~ 3909671 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other downstream 775489 3394204 ~ 3445386 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other downstream 1250535 2910754 ~ 2970340 (-)
G807 NA other downstream 1620364 2550216 ~ 2600511 (-)
LOC111193794 LOC108442858 other upstream 29556 4267001 ~ 4271970 (-)
LOC111193783 LOC108442858 other upstream 39464 4276909 ~ 4321340 (-)
LOC103031123 LOC108411357 other upstream 1466261 5703706 ~ 5721108 (-)
nlk nlk2,nlk,LOC107682651,LOC107666197,LOC106581270 other upstream 4716432 8953877 ~ 9092112 (-)
LOC103037880 LOC108432996 other upstream 4876034 9113479 ~ 9133571 (-)

Expression


Co-expression Network