G130575


Basic Information

Item Value
gene id G130575
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 8672720 ~ 8673363 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU176587
TTGGAGGTTCCGGTATCGATCGGAACTCCGATAAACGCGGCGTCCAGCCCCGCGGCGCTGCTCTGAAACGGCAGCTTCCCCATAGTCGCGATCCCGGAGACCCGAGCCACGAACTCCGCGCTCGGAGGAACATTAAACCCGCGGTCTGATAAATACCTGACCTGACTCACCTGCAGCTTCCGCctcaacacctgaacacacctgctgAACATCCTCGCGCTGCCCTGATTAAACATACTCACCACTAATCAATCAATCTATCAATCACAGAGATAATCCAGCTTTAACTCCTCCATACAGATCAATACTGACTCTGATTATACAGACTGTAAAATCTCTCGAGTTGATCTAATACTGATATCTGATCTCAAACTGATCAAACACAccgataacacacacacacactttcgcactctctctcacactctcacacatgcAGATAACACTCTGTTTGGTATTcaacaagagagagagcaacacaTGGGGGCGGCTGCCCTCGCAATGAATCATGGGAAATGTAGTCCCGTTCAGATATTCGCTCCATTTTCAAAATAAGGGTCTTTTATtatataagaaataagaaattacACTCACATATAATTTTATGTGATAGAAGCGTGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176587 True 624 lncRNA 0.46 2 8672720 8673363

Neighbor

gene id symbol gene type direction distance location
LOC103044589 LOC108433355 coding downstream 30553 8632549 ~ 8642167 (-)
mul1 mul1 coding downstream 85397 8583483 ~ 8587323 (-)
LOC103041018 LOC108433381,LOC108275535,LOC107563149,LOC107706984,LOC107664213 coding downstream 144620 8520364 ~ 8528100 (-)
ttc29 NA coding downstream 175166 8486687 ~ 8497554 (-)
LOC103042037 NA coding downstream 187927 8456487 ~ 8484793 (-)
dnajc16 dnajc16,LOC108433375,LOC107697907,LOC107664231 coding upstream 8279 8681642 ~ 8691680 (-)
ppp1r14c ppp1r14c,LOC107697847,LOC107738512,LOC107754900 coding upstream 45239 8718602 ~ 8732104 (-)
LOC103025739 NA coding upstream 97788 8771151 ~ 8775228 (-)
LOC111194069 LOC108435549,LOC108275468,LOC107673162 coding upstream 110609 8783972 ~ 8790207 (-)
LOC103047035 LOC108435579 coding upstream 163466 8836829 ~ 8851705 (-)
G130570 NA non-coding downstream 8313 8662645 ~ 8664407 (-)
G130565 NA non-coding downstream 16194 8656311 ~ 8656526 (-)
G130564 NA non-coding downstream 18940 8653283 ~ 8653780 (-)
G130562 NA non-coding downstream 22332 8648441 ~ 8650388 (-)
G130429 NA non-coding downstream 108057 8564227 ~ 8564663 (-)
G130578 NA non-coding upstream 1446 8674809 ~ 8676097 (-)
G130579 NA non-coding upstream 5206 8678569 ~ 8763626 (-)
G130581 NA non-coding upstream 6797 8680160 ~ 8681335 (-)
G130592 NA non-coding upstream 55895 8729258 ~ 8770411 (-)
G130596 NA non-coding upstream 90450 8763813 ~ 8766797 (-)
camk2n1 NA other downstream 90267 8579402 ~ 8582453 (-)
G130420 vwa5b1,LOC107664114,LOC107599492 other downstream 134733 8537004 ~ 8537987 (-)
ctnnbip1 ctnnbip1 other downstream 881958 7735739 ~ 7790762 (-)
G130093 NA other downstream 1276929 7394939 ~ 7395791 (-)
LOC111194060 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 other downstream 1615998 7038930 ~ 7056722 (-)
cptp cptp,LOC108433359,LOC107706969,LOC107697856 other upstream 211228 8884591 ~ 8887165 (-)
LOC103021383 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC107697928,LOC107598948 other upstream 641935 9315298 ~ 9322119 (-)
G130892 LOC108433414 other upstream 1168976 9842339 ~ 9843488 (-)
LOC111194083 NA other upstream 2050941 10724304 ~ 10748684 (-)
G131211 NA other upstream 2067376 10740739 ~ 10743899 (-)

Expression


Co-expression Network