G137043


Basic Information

Item Value
gene id G137043
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 33547355 ~ 33550978 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU185281
AAAGTTCTTATATTCCAGTTGCGTTGTCTGAATAgtcttaataattaaatttgaactgaatataaaaaagagTGTAGTTGTATTACTATGCtattatataatcattatatcattaccattaaatgttattaaaataatatcttacaataatacaatttatcacaattattgcTGGAACAATGTATAGTTCAAACAAAAATACTTATCGTGACTGGCCTTCCCCAGGCCATGAAACATCTCCATATTACTCATCACTGCTAATTATCACaactaaatacaatacaatgttgACATGTCAATACCTCAAGAATACCTCAATACATGAAACACCCTCACGTTCAAGAATATTTTTGTGAGAATAAAGtttattagcatttttctaTATTAAAGTGCTATCCAAAAGAGAACAATAAAATTCAGTGTCTCTCAATATTGAAACTTACAAAAATAACTAGATCTGtgtaccatgacttttgccatgtcccatggaagccaAATAACGCTGTACTGACCTGCGGAATATGCATGTGGGGCTTCTCGTCTAGATGTTATTTTtgaatggacaattctagccggATGCTGACGGTCATAATCATTACtacccactgcactgttcactgtgggAGGTAATGACGTATTCCTACTACACAGGTGACACTGTGGATGGAAAAATTTTGCCCACACAACCACAGACATGGAATGTCTCATTCATCTGcccccactatcaggcctcacttgACCTCACATGCATTGTGAAAATTCACAATGCCTTGCCTTGAGCAGGGGTAGGTGCTAGTGTTCAACCTTACCAACATGATAACACCTGACAACTTACACAGGTTGTTACACCGTGTTCACGTGTTTACTGTTGCCCCAAGTTTATCTCTTGTGGGTGTGTTTGAGGCCACTCACTTTGTTGATTGAGAGTATGTGTAGAGCAGCATATAGCATGCAGGCTAATCTAGCAAGCTACTTATCGAACATTCCATTATGTTCTTCTATTcgtttttaaacagaaaaagaagaaacgGCAATTATAAGCCTCTTTTCCATTGTCAGATCTAAAATTTTACAAACATGATTTAAGTGCAGTAGGAACTAGGGACCTTGGACCACATGTCTGTAAATTTGgtcagaaattatttttttgtatagtaTATCGCAACACTGcttcataatttatttaaaatctatataaaaacaaattgcGTACTTCCACAGAAAATGACTGGTCCCTTTTTGCTCTGCCTCTGAACACAGGGTAACATTTAGTGTCCGTTAAAAGTGGATATCACTTATCTTAAATAAACAGGGCCTCTCCATGGGGTCTTACAAACATTAATCAACTGATTAATGCCAGTAAATGAAGTTCAGCATTGTCCTGCTCCATTATGTTTGCCAGCAAGTCTCTGTCCGAGTACAATAAACACAGTTCTGTATGCATTAACATGTCCAGTGTAGCTACTGTACATCCACAATGATCCATGAGCACCTTTATCTCAAAGAAGGTGTAATATTAAGTTAGGTACGCTGATCCACAACCAGGTCGCTGTTTTCCCTCCAAAGAGATAATATGTGAAAGGTCCAACACTGATCAGCTTTTTTACTGTGAAACATTCGCGCAACGTAGGTCAGTAAGTCCAATGAGCTGTCCATGGACAATATGAACTTCTGAAGACTCTAATCAGTCCCAGTCTCCACAGATCCTATTTGCGCTCTTCCACATTCTTGATATGTGGGGAAGCAAGAATGACAAAATGTCTAAACGTAAAATGTTTGTATACCAAGGGTCGGTTAGTCCAACAGGCAGTCTTTTGGGAAGACAGTATGAATCTCAGACTCTAAATCAGTCCCAGTCTCTTCAGAGCCTGCCTGCGCTCTTCCCCGTTCTTGCTTTGTGGGGTAAATACCACACTGATCATGCCGTGGGAACGTGAAGACACCTGCGAGTCTGTGCTTGGCTGCACTAGAGGAGGAATGGGCGAGGAGCCCAGAGACCTCCTGACATCTTGTTCTTTGCCTGAATTAGAAGACAGTTGATCAATACCCATCTCCTTCTGACTCCCTGCAGAAGCCGGTCTGGATCGGCTCCTTCGCAACTGTCCAGGGGACAGCTCTAGATTAGTCTTCTCTTGATTCTTCTCCTGGTTCATTATGAGAGAGGAATGGTCTGCTGTTACGCTTTTAAGACCCATCTTTGGACGCTCCAGGGATGCTGATTTGATCTCAAAGTTTTTTCGACTCCCTCTTGGGATCACTGGACTTCCTCTTCCGTCATTTTCAGGATTTGATTGTGCAGGTAAAATCATTTTCCCTTGTGCCTCCACTTCTGCAAGCTTCGTCTCGTGGGCTGCATCTCCAGATGGTGGCACTGTGGTTGTGTTAAAGGTAGAAGGAGGAGGGATTCTGTGTGGTGGACTGGAGCTGAGACTGGGGGCAGAATCTGTCTCGTCAGCCTTCAGCAAGCCCAGTTTTTTCAAGGCCTCAATGTGAACCTTCTGTGGGTTCATCATGCGATCACCTGATGAAACAAGAGAATGACCAGGCACAGAGTCTTTATGGCTTTTAAGGACAATTTTGGGAGACAGTTTCTTGGGTTTGGGTGCCACAGCTGGTGGGCTTTTAGGTTCGCTGTGGCCTACTGCAGTAGGAGGATGTCCTTCAGttgaataaacagaaaaactggCCTGATTTGACACCTTCTGACCAGATGGTCGTACTATAGGTGCTTTTTCAGGGGCTTTCTTTAGTGAGGCCTTTTTGCGCAAAACGTCCAGTTGTGTTGGAGACAGTGGCCCTCTTGGAGATGACGTTACTGTGCTTTGAGCATGATCATCTTCAGCTTGCCCACCAAAACCCAGTGGAGGAGCAATTGTGATGCTATCTGAAGGCGGTTGTGCCTGTAGTTGGAGTGGAAGCTGAGGCTGAGGTTGAGATTGGTTTTGAGGTTTGGTCTGGGCCTGTGTTTGAGGTGGTGTTTGAGGTTTGGCCAGATCTTGTGATGGGGCTTGCGTTTGAGGTTGGGGTTTAGCCAGATCCTGTGATGGGGCTTGTGTTTGAAGTTTAGCCTGATGTTCTGATGGGGCTTGTGTTTGGGGTTTTACTTGAACTTGTGCTAGAGATTGTGTCCGAGGTTGTAGTTGACTTTGTTTAGGGGGCTGTGTTGGTACTGGTGGAGCAGGTTCCGGCTCATCCATAAAGTCTGAAGGAGGAGGAATCAGCTCCATTAGCATATCAGATGGAACACTAATGAACTTCTGAGTCTTGGGCATTTGATCCAGCATGGGTTCCAGCTGGGTCTTAGGAGGGCATTCTTTAGTTTTTGAATCACTGGAGGGATCAGCCATAACTGGAGGCTCGGGTATGAAAGCTGGCGGCAAATCAGCTAGTTCATCTGATTCGTCAGCAATTGGTTCAACTGTTGTTGGATTTGGAGGTAATTTGGCAGGTTCACCAGATTCATTGCCATTGGTTAGAACTAGTTGAGTTGGCAAACCGTTTGGTTTATGGTCCTTTCCCAAAATCTTGTTGGGGTCGTAATGCGACGATAACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185281 True 3554 TUCP 0.43 3 33547355 33550978

Neighbor

gene id symbol gene type direction distance location
pdyn NA coding downstream 149075 33392049 ~ 33398280 (-)
LOC111194147 NA coding downstream 170943 33374505 ~ 33376412 (-)
LOC103044658 NA coding downstream 283101 33241487 ~ 33264254 (-)
LOC103044063 NA coding downstream 329883 33131809 ~ 33217472 (-)
LOC103043549 LOC108439483,LOC107735267 coding downstream 430572 33105123 ~ 33116783 (-)
LOC103021873 NA coding upstream 160005 33710983 ~ 33758614 (-)
LOC103022489 pfkfb2a,LOC108439471,LOC108276158,LOC104942567,LOC103358644 coding upstream 239144 33790122 ~ 33829607 (-)
LOC111194158 LOC108443443 coding upstream 313025 33864003 ~ 33865857 (-)
LOC103030493 LOC108439469 coding upstream 328135 33879113 ~ 33947555 (-)
LOC103045173 LOC107551500,LOC108411139,LOC103374102 coding upstream 761521 34312499 ~ 34334270 (-)
G137012 NA non-coding downstream 85562 33461361 ~ 33461793 (-)
G137010 NA non-coding downstream 96705 33447844 ~ 33450650 (-)
G137007 NA non-coding downstream 104696 33440868 ~ 33442659 (-)
G137006 NA non-coding downstream 107026 33439243 ~ 33440329 (-)
G136993 NA non-coding downstream 173726 33372252 ~ 33373629 (-)
G137044 NA non-coding upstream 54 33551032 ~ 33552306 (-)
G137104 NA non-coding upstream 226794 33777772 ~ 33778241 (-)
G137106 NA non-coding upstream 229613 33780591 ~ 33831590 (-)
G137133 NA non-coding upstream 293952 33844930 ~ 33846592 (-)
G137148 NA non-coding upstream 321165 33872143 ~ 33953786 (-)
pi16 NA other downstream 36320 33486217 ~ 33511035 (-)
G136773 NA other downstream 763051 32783074 ~ 32784304 (-)
G136691 NA other downstream 1179893 32367193 ~ 32367462 (-)
G136173 NA other downstream 3491627 30048281 ~ 30055728 (-)
LOC103038817 LOC103038817 other downstream 4266663 29274161 ~ 29280692 (-)
G137098 NA other upstream 212496 33763474 ~ 33763827 (-)
G137335 krt8,LOC105023875 other upstream 1238460 34789438 ~ 34792099 (-)
G137487 NA other upstream 1834074 35385052 ~ 35457054 (-)
G137563 plod3,LOC108414592,LOC103371102,LOC107709211 other upstream 2040818 35591796 ~ 35604980 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000192_00252038_00254509 NA coding CI01000192 null 250552 ~ 254509 (-)