G155234


Basic Information

Item Value
gene id G155234
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 330837 ~ 331274 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU210445
AATTTAATCTGCTTTAACATGAGAATTTAACAAATAACCCATATAACCTGCCAAGTGGGGTCTGTATGGGTAGCTCTACTGGGAACCAGAACATTTTTACCATAAGCTCCAAGTTGGCCCCACATATGAATATCAGTGATGGGCCCAACTGGGGTTTTCAGTGATGGGTCATGTCCCGGTTGTACACTGCACACAGAGACTAGCTAGGACTCATTTAATATTAAGGGTGCTGTAATAATGGGTAAAAACACATGTGAACACCCACTCAGAGCCTATTACCGCCTGGAAAGTCAGTGTTTTGTATAGTAAAGCAACTCTGCCACCTAATGGTCATAAACATGAACTACAGCCACCAGACAGCCACAGTAGGGAGAGTCAAAAGTCTCAGGACTTCTGTTTCAGAAATGAAAGGGAAAGAAAGCAAAAGGGAAAATGTCG

Function

NR:

description
PREDICTED: claudin-4-like

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
TU210445 True 438 lncRNA 0.43 1 330837 331274

Neighbor

gene id symbol gene type direction distance location
LOC103033531 NA coding downstream 90254 421528 ~ 537878 (+)
LOC103040340 LOC108410554,LOC107566291 coding downstream 220655 551929 ~ 563776 (+)
LOC103034482 NA coding downstream 347721 678995 ~ 681903 (+)
blvrb blvrb,LOC107692505 coding downstream 373081 704355 ~ 713021 (+)
sertad3 NA coding downstream 382635 713909 ~ 718705 (+)
G155229 NA non-coding upstream 1673 327423 ~ 329164 (+)
G155230 NA non-coding upstream 41872 288741 ~ 288965 (+)
G155217 NA non-coding upstream 118783 211852 ~ 212054 (+)
G155189 NA non-coding upstream 284039 46589 ~ 46798 (+)
LOC103036280 NA non-coding upstream 312614 4453 ~ 18223 (+)
G155233 NA non-coding downstream 13689 344963 ~ 360697 (+)
G155250 NA non-coding downstream 64491 395765 ~ 399614 (+)
G155290 NA non-coding downstream 162137 493411 ~ 497140 (+)
G155283 NA non-coding downstream 256568 587842 ~ 590204 (+)
G155300 NA non-coding downstream 260400 591674 ~ 593996 (+)
G155206 NA other upstream 177574 149347 ~ 153263 (+)
LOC103044527 NA other downstream 772176 1103450 ~ 1106792 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other downstream 855872 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other downstream 872467 1203741 ~ 1223350 (+)
G155776 NA other downstream 2407087 2738361 ~ 2755112 (+)
LOC111194753 NA other downstream 3279744 3611018 ~ 3614491 (+)

Expression


Co-expression Network