LOC103038733 (bcl7b)


Basic Information

Item Value
gene id LOC103038733
gene name bcl7b
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 13798639 ~ 13889044 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU238257
tttaaaagctAAATTTATATTAAAGATCCAATATCTTTTCAAAACTTCGGTAACCGTGTCTCAGGCATCAGGCAGTGTATTGATTATGAAACTATATAAAGTTTTTGTGAGGGAGCTTTTAGAGGTTTAGATGTCTGATTCTATTCCCCACTACCATTATCATTTGGTATGCTTCTTTATAACTGTAGTTGTGACCTACAGTCTTGCATTAGGTCATATCCATTTATCAATATACTTTAACCAATATTTTATTATGGGCGGAGCCTGACCAATATAAATAGTTCTACTGGAGACTGTAAAACTCCCCTGTTATGCTTGAAAAGCTAATCTGAGTCTCCTTTCTCGGGGTTTACAGTATGTGCTGACCTGTGTGCACCAGTCTGTTACACAGAATGTGACGACAGGAGAAGTTTGTCTCTTTAATCCAGTCATGTACATACCTGTAGATTATACATCTAAAGGCCTTAATACAGAATTTTAACTTATGTTTGGAAGGATGTGAataatatttcagtaatttatgGAGTCGGACGTCTCCTCAGGTCTTAAATGCCTCCTCCTGTAAAAgaggtttgattttttttccttctcttcatCATTTTAACTGAATCTGACCCATCCTGACATGTTTGAATTTAATatcaacatttattttgctttgcaCCCAAAGAGGCTCATGTTTCTTTATATCAGATTAGGATGTCAAATCAAAGATGTGACGAATTCTTCACTGACATGGAAGGTatttagcttgtttttatttgtgacATTTTTGTTTGACATGTATAACTCCACACTGGTTCAGTGGGCACATGGATGTtgt
>XM_007259426.3
GATACGAGAGTTAGTCCCCGGACGGAGAGTGGAGCAGAAAgtgaagctaaagctaaaagtGAGGGAAtaaagtgtagagcaggatGTCGGGCCGCTCGGTGCGGGCAGAGACGCGGAGCCGCGCTAAAGATGACATTAAGAAGGTGATGGCGGCTATAGAGAGGGTGCGGAGATGGGAGAAGAAGTGGGTAACCGTCGGAGACACATCTCTGAGAATATTTAAATGGGTTCCTGTGGTGGACACAAAAGAGAAGGAGAAGCCCAAAGTGCCATCTGGTGCAGAGATCCAGCTGAACAACTTCCCTTCAGAGGAAACATCTGAGAATTCCTGCCCAGCACTGCTGGACTACAATGatGAAAACAGCAACCAGAGCTCTCTGTCAGATTCATTTCAAGTGAAACCGGCAGTGGCGGtagacagcagcagcaactcGAGTCCGCAGCCAAGTGAGCCGGTCAGCCCTGCTGTCCACACTCAGGATTACCGCATAGATGACTCCCAGCCACCCACGCTGGGTCAGGAGTGCATGGAGGAACCTTCGCTGCAGCTGCGTGAAATGGCAGATGAACCACCGACGCTGATTAAAGAAGATATTTTACCCCTAGTTCCTCAGgaggaggaggatgaggaagaggaagaagaagaggaaagcTCTGGAGCGCCACCATTAAAAAGAGTCTGTACTGAACATACTTCAGTAATCCAGTCTACTCTGATGagttaacacacacataaactcacacacagacacacacacacacatacacacagcgtGCACTAGGCCATTGATAATCACCTGGGCAAAATACTGTCCAGTCTAGAACTGCTCCAAATGTCTCTGTATGAACCATTTAGCAGCGCAGTCGTACTGTATATGTTCATATCCTGATCGTTCTGTTTGGGCTCATTCATTTGAAGGCTGGACTGGGAGGCAGTTTATCCTTTAAGACACATTCCTGTACAGAGAGGAGAGATGAATGTGACACTGAGTGTTTAGATTAATTTTAAAGACCAGTAATACTGTGCTCTAACAAGGGTTATTATCctttaatactgtaattcaAATTTCTCAAGTTCTCTGTTTAGTCGAGATACATTCAACAATGCTATTTTGGTAAATCCTcgtaaaagtgtaaaactgcACTATTATAATTCATATTGCACAGTGAAGTTGCACAGACTTTTCAGAACACTGGTAAAAAGAAATCCCATTCAACCATAATGAAAAGTGTAGCTCCACCTCAGAGGGTAATATAACAACCAATCTTCAATAGCAGATTCTCTTTGGGAACTGTTTATTTGACACCTCACCACTGTTTAAAAGAAATTTATATTAAAGATCCAATATCTTTTCAAAACTTCGGTAACCGTGTCTCAGGCATCAGGCAGTGTATTGATTATGAAACTATATAAAGTTTTTGTGAGGGAGCTTTTAGAGGTTTAGATGTCTGATTCTATTCCCCACTACCATTATCATTTGGTATGCTTCTTTATAACTGTAGTTGTGACCTACAGTCTTGCATTAGGTCATATCCATTTATCAATATACTTTAACCAATATTTTATTATGGGCGGAGCCTGACCAATATAAATAGTTCTACTGGAGACTGTAAAACTCCCCTGTTATGCTTGAAAAGCTAATCTGAGTCTCCTTTCTCGGGGTTTACAGTATGTGCTGACCTGTGTGCACCAGTCTGTTACACAGAATGTGACGACAGGAGAAGTTTGTCTCTTTAATCCAGTCATGTACATACCTGTAGATTATACATCTAAAGGCCTTAATACAGAATTTTAACTTATGTTTGGAAGGATGTGAataatatttcagtaatttatgGAGTCGGACGTCTCCTCAGGTCTTAAATGCCTCCTCCTGTAAAAgaggtttgattttttttccttctcttcatCATTTTAACTGAATCTGACCCATCCTGACATGTTTGAATTTAATatcaacatttattttgctttgcaCCCAAAGAGGCTCATGTTTCTTTATATCAGATTAGGATGTCAAATCAAAGATGTGACGAATTCTTCACTGACATGGAAGGTatttagcttgtttttatttgtgacATTTTTGTTTGACATGTATAACTCCACACTGGTTCAGTGGGCACATGGATGTtgtgattatattattatttaaaatgtcaataaaGATTTTAGAATGA

Function

symbol description
bcl7b Predicted to be involved in Wnt signaling pathway; apoptotic process; and cell differentiation.

NR:

description
PREDICTED: B-cell CLL/lymphoma 7 protein family member B

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU238257 False 823 lncRNA 0.36 2 13798639 13889001
XM_007259426.3 True 2181 mRNA 0.41 6 13876309 13889044

Neighbor

gene id symbol gene type direction distance location
ska2 NA coding upstream 22809 13766871 ~ 13775830 (+)
LOC103037129 NA coding upstream 204371 13586657 ~ 13594268 (+)
LOC103033364 NA coding upstream 213290 13574468 ~ 13585349 (+)
LOC103021665 NA coding upstream 536407 13261088 ~ 13262232 (+)
LOC111195046 LOC108412889,LOC108410529,LOC108410536,LOC100305029,LOC108412892,LOC108412890,LOC108410535 coding upstream 547089 13250350 ~ 13251550 (+)
LOC111195113 NA coding downstream 24884 13913928 ~ 13920617 (+)
kctd7 kctd7,LOC108415927,LOC107588867,LOC107686134,LOC106603469 coding downstream 182170 14071214 ~ 14077236 (+)
rabgef1 rabgef1,LOC107734461,LOC107577469,LOC107728875 coding downstream 193430 14082474 ~ 14098693 (+)
trim37 trim37,LOC107691657,LOC107577452 coding downstream 212905 14101949 ~ 14130690 (+)
atg101 atg101,LOC107751375,LOC107686213,LOC107589731,LOC107691654,LOC107577413 coding downstream 355168 14244212 ~ 14247659 (+)
G175919 NA non-coding upstream 34476 13761650 ~ 13764163 (+)
G175918 NA non-coding upstream 39673 13756275 ~ 13758966 (+)
G175912 NA non-coding upstream 49989 13747274 ~ 13748650 (+)
G175906 NA non-coding upstream 71678 13717888 ~ 13726961 (+)
G175901 NA non-coding upstream 90157 13701539 ~ 13708482 (+)
LOC111195049 NA non-coding downstream 16364 13905408 ~ 13907384 (+)
G175946 NA non-coding downstream 31486 13920530 ~ 13929117 (+)
LOC111194981 NA non-coding downstream 37196 13926240 ~ 13929117 (+)
G175966 NA non-coding downstream 225050 14114094 ~ 14171071 (+)
LOC103042124 NA non-coding downstream 253123 14142167 ~ 14243143 (+)
G175900 NA other upstream 113076 13679359 ~ 13685563 (+)
LOC111195048 fgf13b,LOC108444526,LOC107555168,LOC107718748,LOC107548853,LOC107720625,LOC107693932 other upstream 380223 13353768 ~ 13418416 (+)
LOC103028411 LOC108444524,LOC107720618,LOC559907,LOC108276802 other upstream 469621 13293298 ~ 13329018 (+)
G175379 cltc,LOC108250671,LOC106581108,LOC107693955,LOC106612978 other upstream 1053586 12739503 ~ 12745053 (+)
rnft1 rnft1 other upstream 1258438 12524141 ~ 12540201 (+)
LOC103039555 LOC108415819 other downstream 62361 13951405 ~ 14069362 (+)
LOC103047397 unc13b,LOC107686461,LOC107688005 other downstream 1905220 15794264 ~ 15973657 (+)
fam136a fam136a,LOC102792467 other downstream 2931891 16820935 ~ 16824328 (+)
G176882 inpp5j other downstream 3153791 17042835 ~ 17046989 (+)
xpo7 xpo7,LOC107678024,LOC107586117 other downstream 4249668 18138712 ~ 18174518 (+)

Expression


Co-expression Network