G181586


Basic Information

Item Value
gene id G181586
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 35861201 ~ 35901409 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU245912
tacaaggtgatgacagtacaggctccttcctacctgcactcgctcctgaagacttacgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttaccaaacattcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccttctactaccagatcaggagaatctctcgctatctttaataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaactaactaccttctactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaactaactaccttctactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaacacactaactaattctaacctcatttccttcttcctcttctctactcctctatcccattatttccctctgacctccttttatccctatccaaagatgtttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245912 True 575 lncRNA 0.43 2 35861201 35901409

Neighbor

gene id symbol gene type direction distance location
LOC103024448 LOC108413536 coding upstream 71964 35736965 ~ 35789237 (+)
LOC111194993 NA coding upstream 231739 35622099 ~ 35629462 (+)
LOC103023820 NA coding upstream 242927 35607772 ~ 35618274 (+)
LOC103043521 adgrg2 coding upstream 264955 35557928 ~ 35596246 (+)
LOC103023494 LOC107577900,LOC108442441 coding upstream 319410 35518171 ~ 35541791 (+)
LOC103047081 LOC103047081,LOC108411574,LOC107589340,LOC100004523,LOC107697431,LOC107686183,LOC107578020 coding downstream 74068 35975477 ~ 36166303 (+)
G181556 NA non-coding upstream 68510 35787101 ~ 35792691 (+)
G181439 NA non-coding upstream 229250 35630171 ~ 35631951 (+)
G181424 NA non-coding upstream 316985 35542348 ~ 35544216 (+)
G181415 NA non-coding upstream 372733 35484101 ~ 35488468 (+)
G181413 NA non-coding upstream 378579 35482286 ~ 35482622 (+)
G181605 NA non-coding downstream 20336 35921745 ~ 35922340 (+)
G181614 NA non-coding downstream 84656 35986065 ~ 35989603 (+)
G181615 NA non-coding downstream 100270 36001679 ~ 36002625 (+)
G181616 NA non-coding downstream 103130 36004539 ~ 36008418 (+)
G181621 NA non-coding downstream 149160 36050569 ~ 36051912 (+)
LOC103024766 zdhhc20a,LOC107589301,LOC107743391,LOC107686182,LOC107728865,LOC107697429,LOC108411113,LOC108276908 other upstream 18330 35816035 ~ 35842871 (+)
LOC103044041 NA other upstream 158206 35685004 ~ 35702995 (+)
LOC107197592 NA other upstream 253608 35600483 ~ 35607593 (+)
nsun5 nsun5,LOC102793237,LOC107686168 other upstream 457577 35392521 ~ 35403624 (+)
LOC103024954 LOC108423745 other upstream 1353877 34334576 ~ 34507324 (+)
G181734 NA other downstream 305158 36206567 ~ 36209854 (+)

Expression


Co-expression Network