G193178


Basic Information

Item Value
gene id G193178
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 27324406 ~ 27324839 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU262127
CTGGGGGGTATTCCAGAAAGCAGGTTAAGTGACAAAACCGGGTAAGTAAACTCAGAGTTAACGGAAACTCAGAGTTTTCCGTTCCAGAAACCGAGCTTAGAGAGAACCTGAGTCAGTTACTATAGCAACTTACGCTCTGAAGCTAACCTGCTCGCTGGCAGGTTAGCTTACTCCGAACTCAGGGTTACGGCCACTTTTCTCATGCAAACGGATCCAGTTGATATTGAAGCGCAAATTATTCGCAGAGCTCTCAGTCCTGAACGAGTAATTAGACCCAGATTAGACGTGTTTTTTAGTTTCTCCTCGAACGTTACCGTTTTTCTTCGCAGTTAATGTTATacctaaacaatattttaaagccacacatttaaaatatcccACATCGTGGATCAGCCTTTTAAAGTATGCCTAACTTTAAAACAGTTGTTGCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262127 True 434 lncRNA 0.42 1 27324406 27324839

Neighbor

gene id symbol gene type direction distance location
LOC103029919 NA coding downstream 20466 27301296 ~ 27303940 (-)
LOC103046766 LOC108436454 coding downstream 24835 27296666 ~ 27299571 (-)
LOC107197599 NA coding downstream 31597 27287220 ~ 27292809 (-)
LOC103031188 chia,LOC108435172,LOC108255197,LOC108255198 coding downstream 34087 27274657 ~ 27290319 (-)
LOC103032351 LOC108435192 coding downstream 114090 27197051 ~ 27210316 (-)
bcl2l15 NA coding upstream 120640 27445479 ~ 27453376 (-)
kif21b kif21b coding upstream 432388 27757227 ~ 27874978 (-)
LOC103045240 LOC108436365,LOC107592563,LOC107699336,LOC107680449,LOC107751004,LOC108254807 coding upstream 586836 27911675 ~ 27955052 (-)
LOC103028137 LOC103028137,LOC108436315,LOC104939458,LOC108254806,LOC103386138 coding upstream 637528 27962367 ~ 28008609 (-)
b3galt6 b3galt6,LOC107592565,LOC107680432,LOC107699339,LOC107555998 coding upstream 699498 28024337 ~ 28028670 (-)
G193154 NA non-coding downstream 18747 27295728 ~ 27305659 (-)
G193165 NA non-coding downstream 24457 27264467 ~ 27299949 (-)
G193160 NA non-coding downstream 84504 27239426 ~ 27239902 (-)
G193156 NA non-coding downstream 94104 27230099 ~ 27230302 (-)
G193110 NA non-coding downstream 185170 27138083 ~ 27139236 (-)
G193179 NA non-coding upstream 3903 27328742 ~ 27331162 (-)
G193181 NA non-coding upstream 31139 27355978 ~ 27356313 (-)
G193185 NA non-coding upstream 45336 27370175 ~ 27370433 (-)
LOC111195339 NA non-coding upstream 58141 27382980 ~ 27384041 (-)
G193194 NA non-coding upstream 58292 27383131 ~ 27386900 (-)
G193097 NA other downstream 291317 27031663 ~ 27033089 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 600300 26711253 ~ 26724106 (-)
LOC111195415 tfeb other downstream 1445753 25874910 ~ 25878653 (-)
G192815 mdm4 other downstream 2106856 25211675 ~ 25217550 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other downstream 3218508 24039246 ~ 24105898 (-)
LOC111195340 NA other upstream 65955 27390794 ~ 27391571 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other upstream 100203 27425042 ~ 27701331 (-)
tmem167b tmem167b other upstream 686152 28010991 ~ 28015612 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 869540 28194379 ~ 28213070 (-)
LOC111195343 LOC108434908 other upstream 1251268 28576107 ~ 28586222 (-)

Expression


Co-expression Network