LOC103022914 (fev,LOC108411904,LOC103392488)


Basic Information

Item Value
gene id LOC103022914
gene name fev,LOC108411904,LOC103392488
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171228.1
NCBI id APWO02000826.1
chromosome length 1889954
location 1646891 ~ 1653574 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015601996.2
ttattatttttcttttttgtaaactTGATGGATGAAACCCTCTTGCCATGTCTTTTGTCAATGGCTAATTAATATTATCATGGGGTAAAAAGCCTTTTAAATTTATAGCCCCCGCCCTGGAGCTCTGGTGGTGAAGTTGGTGGTCCAACCCCTTTGTCTTGtttcaatatttatatatatgaattttattaaGGATGGACATTCAATGACGTAAATTGAAAGTGAAGCAGATTTTTTTCGGTAGTTAAAGCCtcccataatatatatatattttttcaatttaaaaaatataattttatgaaAATTAGAACAATAGAAAATGTATTGGAACCAAATCTTTTTCTACTGACTTCCATTTCAAGAGAAGCaatatttttgcttttcttgtattttattaagaatgGACAAGTGGAAACAAATATGAATAGgaaacaaatatttttgaaaGTGAAGTAATTCTTTtgggtattttatttttcctgtaAATTTGGTGATTAAAGCCCTCTTGCTGTGTCTTTTGTCAATGGTTAATCAATATGATCATGATGTAAAAAGCCTTTTAAATTTATAGCCCCCCGTCCTGGAGCTCCGGGACACAGTGTTCCCGGTGTTTGGCCGCGCGCGCCGGAGCGTGCCTAAAAGGTAAACAGCGGGCAGCAGGCCGGCTCTGTTTGCAGAGAGGCGAAGCGGCGGAAAAGAGAGAGGATCTGAACTGGTTTCCATGTCAAACACTTCAATTCTCCATAGAAACTCCGATCTTAACGCTGAAACTTTATTAAAGGCAGATAGCGGTAAGCGATAAGCGCGCGGTTTCTAtcggtgtgttttttattgcgCGCGGGGAGGGCTGACAGAGGTAAATTGCTCTTTTAATTAAAGCAATGCTCCAGAGGAAATTGCTGTCTGAATATTGTCTCAGAGATGGGCGCTGCTGACAGTTGCCTGGAAACTTCAATCTGTTTCACATTTATTCCAGATCCCAGTTTTGagataaagtttaataaaaaatctcCCCCTCAATGAAAGCCTAAGCCCGCGTGCGCCTGCAGCACAATGCCCCAGCGCTGCGGAGGAGGAAGCCTAGTGTTTAACATGTATCTCTCAGATCCTACAGAAAACTTACTGAAGGACACTAAAACATCGTCGTGGAGCCCCATCAACACAGGAGTGCAGAAAGGCAGTGGTCAGATCCAGCTGTGGCAGTTCCTGCTGGAGCTCCTGTCCGACAGTTCCAACACCTCCTGCATAGCGTGGGAGGGAACTAACGGCGAGTTCAAGCTGCTGGACCCGGATGAGGTCGCGCGGCGCTGGGGGGAGAGGAAGAGCAAGCCCAGCATGAACTACGACAAGCTGAGCCGCGCGCTGCGCTACTACTACGACAAGAACATCATGAGCAAGGTGCACGGAAAGCGCTACGCCTACAAGTTCGACTTCCACGGCCTCGCGCAGGTGTGCCAGCCCACCTCCACCGAGCAGGCCCTGTACAAACTGCAGACCAACTTCACCCCCATCCCGTTCTCCGGCATCCCCAACATCTCCAAACTCAACCTGGGGCCCCCTGGCTTCTCCTATTGGCCCGCCTCCCCCCAGGCCCTGTACCACAGCCACGCGCTGCAGCCCGGCGGCGCCTTCAGCACCGTATCCCCCGCGCACCTGAGCTGCGTCAACAACCTCAACAACATCAACAACATCAACAACCACtacaactgagagagagagagagagcacctgCACGCACGCGCAGCGGCTAAACCCCGCCCACAgctcacagaacacacacaataCTCAATTACCGCATTACAGTACTAAATAATACTCAATTACAGCGTTACAGTACCTAATTATTACTGAATTACTGCATTTTAGTACTGAATTATTACACACAATATtcaattacttaattattacacacattacacacaatacTCAGTTCTTGCATTACAGCactgaataaatactgaattacattacagtactgaATTATTGCACACAGTTCTGAATTAACACTGAATTACTACATTGCAGTACTTAattattacacacagtactaaAATAATACTGAATTACTAAATAACAGTACTGAATTAGTACACAATTACTGCATTACAGTAGTGGGTTAATAATGAATTTCTGCAATGGAATACTGAGTTAATATTACATTTCTACATTACAGCCCTGGATTATTACTGGATTACTACATTACAGTACAGAATTAATCCTGAAATACTGCATTACAATACTGGATTTATACTGAATTAATACATTGCAGACTGAATTAACCCTGTAAAAACTGAATTACTGCATTACACTTCTTAGTTAATACTGAATAACTACAATACAGTACTCAATTAATGCTGTCACAGTGAATCAGTGCTGTAAATTGTTAATTCAACACCATGACATTTATTCAGTACTTTTACGTTTTGATttagtaataaaacatatttattcagTACTTTAATGTGTTTATGGTGCTGTGGGAGGTTTTGCTGTAGTGTTTTGCTCTGATTCTGGACGTGCAGCTGAGATTCGGCTGTTAAAGGACATGCTGAGGTCTTCAGGTCTGCTGAAGGTTGTGTGAAGGTCGTTTGAAGGTTGTTTGAAGGTCGTGTGAA
>XM_022686686.1
tgttattatttttcttttttgtaaactTGATGGATGAAACCCTCTTGCCATGTCTTTTGTCAATGGCTAATTAATATTATCATGGGGTAAAAAGCCTTTTAAATTTATAGCCCCCGCCCTGGAGCTCTGGTGGTGAAGTTGGTGGTCCAACCCCTTTGTCTTGtttcaatatttatatatatgaattttattaaGGATGGACATTCAATGACGTAAATTGAAAGTGAAGCAGATTTTTTTCGGTAGTTAAAGCCtcccataatatatatatattttttcaatttaaaaaatataattttatgaaAATTAGAACAATAGAAAATGTATTGGAACCAAATCTTTTTCTACTGACTTCCATTTCAAGAGAAGCaatatttttgcttttcttgtattttattaagaatgGACAAGTGGAAACAAATATGAATAGgaaacaaatatttttgaaaGTGAAGTAATTCTTTtgggtattttatttttcctgtaAATTTGGTGATTAAAGCCCTCTTGCTGTGTCTTTTGTCAATGGTTAATCAATATGATCATGATGTAAAAAGCCTTTTAAATTTATAGCCCCCCGTCCTGGAGCTCCGGGACACAGTGTTCCCGGTGTTTGGCCGCGCGCGCCGGAGCGTGCCTAAAAGGTAAACAGCGGGCAGCAGGCCGGCTCTGTTTGCAGAGAGGCGAAGCGGCGGAAAAGAGAGAGGATCTGAACTGGTTTCCATGTCAAACACTTCAATTCTCCATAGAAACTCCGATCTTAACGCTGAAACTTTATTAAAGGCAGATAGCGGTAAGCGATAAGCGCGCGGTTTCTAtcggtgtgttttttattgcgCGCGGGGAGGGCTGACAGAGGTAAATTGCTCTTTTAATTAAAGCAATGCTCCAGAGGAAATTGCTGTCTGAATATTGTCTCAGAGATGGGCGCTGCTGACAGTTGCCTGGAAACTTCAATCTGTTTCACATTTATTCCAGATCCCAGTTTTGagataaagtttaataaaaaatctcCCCCTCAATGAAAGCCTAAGCCCGCGTGCGCCTGCAGCACAATGCCCCAGCGCTGCGGAGGAGGAAGCCTAGTGTTTAACATGTATCTCTCAGATCCTACAGAAAACTTACTGAAGGACACTAAAACATCGTCGTGGAGCCCCATCAACACAGGAGTGCAGAAAGCTTTATGTGCACGTGTTCCCGCAGGCAGTGGTCAGATCCAGCTGTGGCAGTTCCTGCTGGAGCTCCTGTCCGACAGTTCCAACACCTCCTGCATAGCGTGGGAGGGAACTAACGGCGAGTTCAAGCTGCTGGACCCGGATGAGGTCGCGCGGCGCTGGGGGGAGAGGAAGAGCAAGCCCAGCATGAACTACGACAAGCTGAGCCGCGCGCTGCGCTACTACTACGACAAGAACATCATGAGCAAGGTGCACGGAAAGCGCTACGCCTACAAGTTCGACTTCCACGGCCTCGCGCAGGTGTGCCAGCCCACCTCCACCGAGCAGGCCCTGTACAAACTGCAGACCAACTTCACCCCCATCCCGTTCTCCGGCATCCCCAACATCTCCAAACTCAACCTGGGGCCCCCTGGCTTCTCCTATTGGCCCGCCTCCCCCCAGGCCCTGTACCACAGCCACGCGCTGCAGCCCGGCGGCGCCTTCAGCACCGTATCCCCCGCGCACCTGAGCTGCGTCAACAACCTCAACAACATCAACAACATCAACAACCACtacaactgagagagagagagagagcacctgCACGCACGCGCAGCGGCTAAACCCCGCCCACAgctcacagaacacacacaataCTCAATTACCGCATTACAGTACTAAATAATACTCAATTACAGCGTTACAGTACCTAATTATTACTGAATTACTGCATTTTAGTACTGAATTATTACACACAATATtcaattacttaattattacacacattacacacaatacTCAGTTCTTGCATTACAGCactgaataaatactgaattacattacagtactgaATTATTGCACACAGTTCTGAATTAACACTGAATTACTACATTGCAGTACTTAattattacacacagtactaaAATAATACTGAATTACTAAATAACAGTACTGAATTAGTACACAATTACTGCATTACAGTAGTGGGTTAATAATGAATTTCTGCAATGGAATACTGAGTTAATATTACATTTCTACATTACAGCCCTGGATTATTACTGGATTACTACATTACAGTACAGAATTAATCCTGAAATACTGCATTACAATACTGGATTTATACTGAATTAATACATTGCAGACTGAATTAACCCTGTAAAAACTGAATTACTGCATTACACTTCTTAGTTAATACTGAATAACTACAATACAGTACTCAATTAATGCTGTCACAGTGAATCAGTGCTGTAAATTGTTAATTCAACACCATGACATTTATTCAGTACTTTTACGTTTTGATttagtaataaaacatatttattcagTACTTTAATGTGTTTATGGTGCTGTGGGAGGTTTTGCTGTAGTGTTTTGCTCTGATTCTGGACGTGCAGCTGAGATTCGGCTGTTAAAGGACATGCTGAGGTCTTCAGGTCTGCTGAAGGTTGTGTGAAGGTCGTTTGAAGGTTGTTTGAAGGTCGTGTGAA

Function

symbol description
fev Enables transcription cis-regulatory region binding activity. Acts upstream of or within hematopoietic stem cell differentiation and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in several structures, including brain; endothelial cell; pancreatic bud; presumptive blood; and serotonergic neurons. Orthologous to human FEV (FEV transcription factor, ETS family member).

NR:

description
PREDICTED: protein FEV-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0030154 cell differentiation biological_process
GO:0007399 nervous system development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09437 FEV; ETS oncogene family protein FEV

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015601996.2 False 2615 mRNA 0.42 3 1646891 1653572
XM_022686686.1 True 2641 mRNA 0.42 3 1646891 1653574

Neighbor

gene id symbol gene type direction distance location
LOC103040456 LOC108443386 coding downstream 256365 1372333 ~ 1390526 (-)
LOC111197342 NA coding downstream 767374 874057 ~ 879517 (-)
LOC111197343 LOC108412955 coding downstream 774269 857669 ~ 872622 (-)
thsd7b LOC108414794 coding downstream 1312714 126091 ~ 334177 (-)
LOC103033680 NA coding downstream 1539962 100662 ~ 106929 (-)
LOC111197335 cryba2,LOC105907595,LOC107749902,LOC107748546 coding upstream 5464 1659038 ~ 1665729 (-)
itgav NA coding upstream 47131 1700705 ~ 1752812 (-)
G244712 NA non-coding downstream 36924 1609698 ~ 1609967 (-)
G244703 NA non-coding downstream 124515 1522098 ~ 1522376 (-)
G244702 NA non-coding downstream 125112 1521249 ~ 1521779 (-)
G244680 NA non-coding downstream 144333 1430997 ~ 1502558 (-)
G244665 NA non-coding downstream 424673 1178645 ~ 1222218 (-)
G244792 NA non-coding upstream 138352 1791926 ~ 1792440 (-)
G244793 NA non-coding upstream 141537 1795111 ~ 1795590 (-)
G244795 NA non-coding upstream 147740 1801314 ~ 1801582 (-)
G244805 NA non-coding upstream 187753 1841327 ~ 1841797 (-)
LOC103033996 hnmt,LOC108413065 other downstream 1532326 108507 ~ 114565 (-)
LOC103035287 NA other downstream 1568596 62253 ~ 78295 (-)
G244785 NA other upstream 65248 1718822 ~ 1723437 (-)
zc3h15 zc3h15,LOC107752875,LOC107663835,LOC107562108,LOC107749874,LOC107672221 other upstream 105467 1759041 ~ 1771385 (-)
LOC103023859 LOC108413098,LOC105902664 other upstream 120098 1773672 ~ 1794855 (-)
LOC111197344 NA other upstream 149161 1802735 ~ 1830865 (-)
G244806 NA other upstream 213106 1866680 ~ 1869982 (-)

Expression


Co-expression Network