XLOC_007702


Basic Information

Item Value
gene id XLOC_007702
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 7520101 ~ 7523786 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016356
CTTTACTATCTTATCTGGTGTTTCTAGCGCAATCTGAACTTTGAACGAATCTGAAGGCTTTTAAACAATTTTACTGATAAACAAGTGGAAAAAAAAGCctaattaaaaactaattaagcagtcttttttttttttttttgagtgtatggaAAATAATTAGCCATTCAATCACATACTCATTTGTAAAATTATATCACTTCTTTCCAGTATTTAATCAGCTTTGTTTATCGTCACCCGCATTCCATTGCAGCGTATATTAAAACAAGCACTTAAAAGTGAGACTCTCTATGGTTGAGGACAACGTTGACACTTTTCTCCTCTCTATCTGTATCTGTCCCTCCCCAAACTTTTTCCTCTAGTGCGCATTTATTTAACGCatggtttatttgtttatttatttatttctgaaataTTGTAATGTGAATCGGTGACAACCCACGGCTTCGCTCTCCTCCTCCGGTGTCACTCATCCTCTGCCTCCCTCTCAGTTATGGCTGGGCGGACGACACTGGCCCCagataacaattaaaaaataacaacagccaTCATAAAGGCTGCCCGCTATTTGGACAGGCACATCAATCCAGAGGCGCTCTGGTTTCTTCTCTTAATTAACCCTGCTGATTGAACGGGCCTCGCTGACCttgagaaaaaataataaaacgttGAGGAGCGCGACGTCTGTTCAATCTCGTGTTCCTCCGCATAATACATCAGTTCGGCGACTGGTTGTTGAAGTGGTGTCGGCGTAATCGAAGGTGCTTCTTGAGAATGCCGGATGAGATATGTACACTTTAGCTGAGCTTTAATTTCATCCTGAGAGAAGAATGAGGAGAGCGAATGTGTCTGGTTGCCAGACgctcaaaaaacaaaaagctgGATGAAAGTGGATTAATGCTGCGGCAGATTATGTGCAATTGAGTCTCTTTTGGGGTTTTGTGTCATGGTTTTAACAGAGATATTGTGCAAAACAACTGGTTTTAACACTGAAAATTATGAGTCAAACtattagagtggctgactgtaggattggtaacctagtaaccagcAATAAACAATCATAATAGAGAGAGCTGATTGGTTGCGTGGGATTAATGTTTAATGCCGGATGAGATATAAACATTTTAGCTGAGCTTTAATTTAATCCTGAGAGGAGAATGAGGAGAGCGAATGTGTCCGGTTGCCAGACACTCTAAAAACAAACATCTAGAGGGAAGTTGATAAATGCTGAGACAGAATATGTGCAACTAACTAAGGTTTGGAGAGTGTATTTGGGGGTTTTGTGTCAtggtttaacagaaatattgtgcAAAACAACTGATTTCAACACTGAAAAGTATAAGTCAAGTTGTTAGTCAAGAACCCAGCAGTAAACAAGCCTAATAGAGACAGCTAATTGATCACATGGGTGAATGTTTGGTACAATTTATTTGGCAAATGCATTTCCATTTCTAATTATTCACATTAAACCTTATTCGCTTAAGTCTAAAACCAACTTATTTGCGCATTTagagacttttatttaaaatgtggtgTTTCCATCCCTCGTTTCTCATGCGATACTTTAAAATGGCTGATGGAAACCTATTAACATTCATGTGCATGAGCAGAAGTAACAAGTTGCTAATGTCCCTATTAACAAGATTTTtagaattatacaaaaaaaaactagcatCTTATCTAAAGGATGGCTTTTTTGAACTTtagctgtttttaaatgtgcaaattttaatctaaattaaaaaaaggaatcTCTAGTTTGGTTATTTACACGTCAATATTTTTCTCTGTAACAGTTCGAATTATCCTCTAGCGCTAACTTGCTCACAGTCCATAGGGAACGTGAAGGGACCGAATGTTGTATTTATACTGCACACCTACTGAACACACTCCATTACCGCTTGAGAAGTAAGTTCTTGATCGAATTCTCTACAAGTGCACCCTCTTTCTCCCTCACACACACTTCCACGGACATCAACGAGAGCGAATGAAAGAAACGAGATTGAGAAAAAAAGCATCTGTGTCAGCAAAAGATTTataagaaacagaaaaaaaggatGTGATTCTAgactgtatgtttgtttttttcttagctggagggtttgagtctctccTCCTCGTCTCCGTCTGTTCTTTGccttgatctctctctctcttcttttttttcgATTTCGTTCCCATCACGAGTAATTCGTCTCCGTGAACACACAACAAGATAAACAGTTTGTGTTGTAAGCCATTATCTCTGTGAAAGTAAAACAACAGGCACAGGGAGAGGTGCGAGGCGACAGGCGGTTTGGAAAATGACTTCCCGTTTCTTCCCCTCGGGTTCTAAACCCAGACCGGACTCCGACACCTGCTGTGTGGcgagatatttatttatttagtgtgtttatttctttattttgggCTTTATTACTCATGTTTTTTTCTCTGTTCGCGgacgtgtttttttatttatgcccCTGGTTAGAGTGCACAGTCTGTGCTGAGTcaaaaaaaatgaaagcacatcgcAGATAGAGCAATAAATGAAAAGAGCTTGCATCTGCGCGATCGGCTCCGCAGCAGGCcagaggagtgtgtgtgtatgtgtgtttgtgattaGGTGTGCGGCCTGACTCGTGAAACACGGAGGCATGATAAACGAAACATTCGGCAATCATGCTCGACGTGttttgttttcgtttttttttctccagcgaATCACGTACTTACAAACACACTCGTTTCATACACAACAACATGATCAGCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016356 True 2755 lncRNA 0.39 2 7520101 7523786

Neighbor

gene id symbol gene type direction distance location
XLOC_007701 dnd1 coding downstream 110737 7397804 ~ 7409364 (-)
XLOC_007699 trappc11 coding downstream 145052 7320948 ~ 7375049 (-)
XLOC_007700 BX890601.1 coding downstream 158236 7361749 ~ 7361865 (-)
XLOC_007698 si:ch211-51f19.1 coding downstream 213118 7305686 ~ 7306983 (-)
XLOC_007697 stox2b coding downstream 274130 7168447 ~ 7245971 (-)
XLOC_007703 NA coding upstream 519 7524305 ~ 7533138 (-)
XLOC_007704 si:ch211-39i2.2 coding upstream 201090 7724876 ~ 7744153 (-)
XLOC_007705 sting1 coding upstream 240545 7764331 ~ 7786585 (-)
XLOC_007706 ppp3cb coding upstream 265307 7789093 ~ 7888748 (-)
XLOC_007707 NA coding upstream 439490 7963276 ~ 7967479 (-)
XLOC_007641 CU855896.1 misc downstream 5112261 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 5112670 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 5113029 2406945 ~ 2407072 (-)
XLOC_007690 NA non-coding downstream 792384 6623450 ~ 6727717 (-)
XLOC_007688 CT009487.1 non-coding downstream 1040698 6462273 ~ 6479403 (-)
XLOC_007687 NA non-coding downstream 1117332 6330241 ~ 6402769 (-)
XLOC_007684 NA non-coding downstream 1316097 6193249 ~ 6204004 (-)
XLOC_007709 NA non-coding upstream 721796 8245582 ~ 8283199 (-)
XLOC_007711 CR407701.1 non-coding upstream 859763 8383549 ~ 8383923 (-)

Expression


Co-expression Network