CI01000013_10261599_10283287


Basic Information

Item Value
gene id CI01000013_10261599_10283287
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10260271 ~ 10283967 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_10261599_10283287.mRNA
CTATATAAAGGTTTGGACAGAGAGTTTGCTAATGGGTAAATAATGAGGCCGGCATGCAGAGCGAGAGCGGCAGTCTGCCAAGTTAGTTCAAGTGGTGTTCAATTTTCATTAAAGTTGCCTCCTACTACAGTGAGCTCCCCACTGACTCCCTATCTAATTGATGTCTGCTTCCAGTGAGAGACGCAAACTCAAGCAATTGAACTCAACACCTAAATTTACACATCAGATTCTACTACTGAACTAAATAGGCTTAAATTGTTGTTATATATATTATTGTTGTTATATATATATATATTTTACAACAACATAAGCCTATTTAGTTCAGTAGTAGAATATGATGTGTAAATTTAGGTGTGAAGTTTAATTGTTCATCTGCTGAACCATATTCCTGCATGACTCCAGGGTTCAACTATTACACAACGTAATTCAATGCCACTTACTCACACAAGGCCAGCGTTGCATCATACAGTGTTCGTAGTCTTTTCTAGCAAATCTCACATTGGAATCAGATGACCAAGGGCCTAAGGTACATAGTCTTAATATCAGATGGGAATGTCTATGGAAGGCAAACACAGAGTATGCATGTAATTCTTTTTCAAGAAAAAAAGGACTTTCATTGAATATTTCTGCCTTTCATGTCCTACAAATACAGCACCAAATTTGGACAAATAAGAATTGACTGTGTCAAATATAAAGAAATTAAAAAGTGAAACGTGGTTTTTAATGCAAAATCAAAATGCAAAGTCAAGGCTGAGAGTACCTGTGGTGGGGAGGCTTGCTGAGTACTTTTCAGGGCTGCTCGTCCACCTGTGGCTCCAAGAGCAAGCGCAGTGGCATCAGCATAGGGGGGTGGAAGAGGTCAATATGAACCCAACGGTCATGAAGCCAATGTTGCAACACTTGTGGTAAGCGAAGGGCGTAGTAAGGCTCATAAGGAGTCACGGCCATCCACAGGGCCTGGAGAAGGATGGGCACTGCCAGGTTTTACTCTTAGCCACACACAAACGATGATAAATAGCTCTCCAAATGCCATATCGGATCGGTCACCCAGGGAAAAAAAAGGACCGTGCTATCCGCTCCTCACCAGGACGCGATGAGTATGCTACTGGTGACCAAAGAACAACAAGTCTTCGTGGTAGAAACATCTTCACCATAGCCACATGAAATGTCCTTATGTTGCAAGAGATTGGCAAGCTTAAAGAACTTATTCATGAGATGGAACAATACTCCTGGCATCTCTTAGGTCTCTGTGAAACTAGATGGAAAGACCTCAAAGAAATGTCAACAGATGAAGGCCACCAGTGGACAATCTGACAGACACATGAACCATGTTGGTTTCCTTGTACATAAGGACTGCAAGAATACTGTCAACCAATCTCAGGAAGGAATCTACCATCTGCCTCAGTGCAACACCTTTCAACATTACTATCATCCAAGCCTATGGACTCACCTCTTATTACAGCAAGGAAGACATAGAAGAGTTCTACAACCAGGTGCAAAATACCATCGACAAGTCTCCAAAGAAAGACATTATAATCATTCAAGGTGACTGGAATGCCAAGGTGGACGCTGATGCACAGTCAGACAGGAAAGGCACCTGCAGAGCAGCTTGCAACCCCAAGACCAACAGCAGGGGAGAAAGGCTACTGGAGTTTGCCACCTATGACAACCTTATACTGGCAAACACAGTGGGAAACCACAAGAACTCATGTAAAAGGACATGGCATGCACCTAATGGAATGCAACACAATCAGATCGATTACATCATGATCCCACGACGTTTAAAGAGCAGAATAAAGCAAGCCAGCACCCACACCTTTTCAGGGGCAGACATTGGAAGCAACCATGACTTAGTGTCAAGTTTCCAAGCCTTCATTGGTGGAAAGCAACTGCAACACTGGCAAATATATCGCTCTGGGTCACTGATAAGATACTTCAGCATTGTGACAAGGCGTCAGCTCAAGAAAGAAAGAAATGTTATCGATGGCTCAAATAAATACAAAGAGGACAACAGGAACATCAAGAAGAGCATGAAAGAAGCCAAAGAAATATGGATTGAAGATCAGTGCAAAGAGACCAAAGGCTGCATCAGCAACAACAACAGCAAGAAAGTATTTCAAGTTGTGAAAAATCTCACCAAGAAGAAGGAAGCAAAAAATGAAAACAGTCAAGGAACATTGCACAGCTTTTACAGCTCAACGAATGACAGATGCTTTCCATTCATGGACCTGACCAAAGCACATAGTGTTTTACCATGTAATCTTGAGCTTGCGTTCATGGAAACCGTATCTGCCAAGCCACTTAACCCCTGTAAGCCCCGATCCCTGAACCCACTTGCACAGTGTTATTTTTACCAGCAAACCCTCAACCACTGTAACACACAGGAAGTCTGCTGGGATATCATACGATTGCTGGTTGCAAGATCAGTCGGCCCCTACACAAGTGATTCTCAGCTGGTGCAGAGACCAAAAGGAGGAGACCGGAGGTCATTCTGGGTGATGGCAGACACACAGAGCAAGAACACAGCTTTGACACAGGCTTTGGAAAGCATTCACCCCCGACTGACCCTCTCTGTCCAGACGCGAGGACCCACTAAGGTGGGCCGCACATCGCCGGAACCAGTCGGCCTCTCCACGCTCACTGCATCCTGTCAAAGAGGAATCTGATACTCACACACAGTTTGCAAACAAAGCAGGGTAGGAACAGGGGCTACCTGCAGGGTGATATAGCAGCAAGAGAACCGTGCAATGCATGTGCTATATCACTCAAGACACAGAGGGGGAGAATGAATGAAAAACGAGGGGAGGAAGAGATAGACAGATAGAGAGACACATGACTAAAGGAATGAGTTTGGGGGTATTCTATGTGTTTATGCATGTTATATTTTACTACAATCTACAGTACTATTCAAAAGTTTGGGGTCAGTAAGATTTAATAATGTTTTTGAAGAAGTATTTATGCTGACCAAGACTGCATTTATATGATCAAAAATACAGAAAAAAAAAAAAAAACAGTAATATTGTGAAATTTTATTACAATTTAAAATAATTGTTGTATGTGAATATATTTTAAACTATAATTTATTCATGTGATGGCAAAGCTACATTTTCAGCTTCATATTTTTGAGGAAACTGTGAAAGAGTTTTTTTTTTTTTTTGAGGATTCTTTGATGAACTAAAAAGTTCAAAATAACAGCATTTATTTGAAATAGAAATCATTTGGAACTTTAAACATGTCTTTACTGTCACTTTTGATCAATTTAATGAATCCTTGCTGAATAAAAGAAAAAATAATCTAATGACTACAAACTTTTGAACAGTATACATGGAGAACACAATTTCATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_10261599_10283287.mRNA True 3346 mRNA 0.41 6 10260271 10283967

Neighbor

gene id symbol gene type direction distance location
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 576838 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 816248 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 969511 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 999652 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 1079114 9177107 ~ 9195268 (+)
CI01000013_10335904_10336688 NA coding downstream 51937 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 216723 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 301851 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 472960 10756927 ~ 10792761 (+)
CI01000013_10808688_10819703 NA coding downstream 524721 10808688 ~ 10819925 (+)
G84289 NA non-coding upstream 6012 10253174 ~ 10254259 (+)
G84265 NA non-coding upstream 72614 10186533 ~ 10187657 (+)
G84202 NA non-coding upstream 132519 10123760 ~ 10127752 (+)
G84242 NA non-coding upstream 142417 10117614 ~ 10117854 (+)
G84217 NA non-coding upstream 176222 10082294 ~ 10084049 (+)
G84299 NA non-coding downstream 2044 10286011 ~ 10287310 (+)
G84304 NA non-coding downstream 53531 10337498 ~ 10339002 (+)
G84323 NA non-coding downstream 64893 10348860 ~ 10350255 (+)
G84324 NA non-coding downstream 70716 10354683 ~ 10356731 (+)
G84325 NA non-coding downstream 73791 10357758 ~ 10380783 (+)
G84250 NA other upstream 44309 10215127 ~ 10215962 (+)
G84215 NA other upstream 180935 10076454 ~ 10079336 (+)
G84194 NA other upstream 223478 10030608 ~ 10036953 (+)
G84005 NA other upstream 658036 9601611 ~ 9602235 (+)
G82581 NA other upstream 925323 9329329 ~ 9334948 (+)
G84768 NA other downstream 1886022 12169989 ~ 12170818 (+)
G84790 NA other downstream 1900975 12184942 ~ 12201975 (+)
G84864 NA other downstream 2081082 12365049 ~ 12375905 (+)

Expression


Co-expression Network