G84118


Basic Information

Item Value
gene id G84118
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9824851 ~ 9828803 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95689
TTCATCTTTATTATTGCTATTTGAGAGATACTTGCCAGATATGCAGAAGTAAAGGCACATATATATTTTAATAAACACAAACACACGCAAAGTTGATAAATACTATTGTCGGAGTAAGATGTGAATAATACATTGAGTATGAATATTACTGTACATGAATATGTGAGACATTAAACACACTGTACAAAGACAACATTTTACAACTTTACATTATCCGTAGCAGCTTACTATACATTCAAAAATGAGACACTTGCCGTCTTTCTCACATACAAACATCAGAGAGAGGAGCAACTGATCGAATACACATTAACTCTGATGGACCACAGGCCTTTCAGACACAAAGGGAGGAATTCAGAGTTTAAGTGCACCTGCTGATAGCAGCTTTTTATTTGCACACACTGCCTGTGCCCCTCTCTCTTTTTCTTTTTTTTTTTGGAAGCCCATTTTTGACACATAATGGGAAAAAATCATGCTTTGGTAAATTATGGGCCTCAGTTGAACTTAGAGTGTGTGTACGCTAAAATCCACACCAACGTTCATATTTATAAAAAACGATCTTTTACGTGGAAAAGGGTCTAAGCAGATGTACGCACATTTCCTCGTGGCAGAGAATCGGAGAACTGCAGGCATTTGGAAATCTAAGCAATTCTTGCCGCTCGCCATTCTTAAGTAAAGGATTTGGATGTTGACTGGTGCTATTTTATATGTTAATGACCTTAATTAGGCGGCGTTTACAAGGCTGAAATCTGAAACCATACAGCTGCGCACAATTTCAAGATCATTTACGATTTATAGATTTCACATCTGGAAGAGACGCGTACGCATGTTTTTTGTGCGTATGTTCGTTCTGAATCACACGTACGCACATTTGAGAAATGATCGTAAGATCAAATGTAGGACCGTTTCTACGCAACATTTTATAAATGAGGCCCCATAATTATGACATAGATACTAAGTCATATTTGTGTCTTAAAAAGTCAAAAGTATGTGATAAAAAGTCACAATTATGTGATAAATGTTGAAACTATGGGATAAAAAGTCAAAATTATGATATATATGAAAAGTCAAAATTATGGCAAAGTCAATATTATGAAATAAAAGGTCATAAAAATTTAAATGGACATAAGTCATAATTATGACGCAAACTAGGGAAAATGATTTCTTGTGATAATTTTGACTCATCATCTAAAGAATTGACCAAAAGCATGACTTTTTTTTTTTTTTATGTGGCAGATTTCCATGTTTTAGCTCCCGATTCACTAAAAGAATTATGTAAATGAAGTAACAGTGCAAACAAAATCTGTACTGCCATGCTCAATAGAGAATGTACACAAACATCTTGAAATGAAAAGTAAATTCAGTTTGCTGTAATACAGGGACGTTAATTGCGATAGACAAATATTGGTGGGATTCGTGAATAATGCGCACTCCAAAATGATCCTAATTTGCATATATGTAAAGGAGGCATGTTTGCACTGAAAATAATGACAATGATTTTATCACCTGGTTAAACTGGATTGCAGGCGCTTGGGGAATACGACGCAAATTCTGCAATTGAATTCGCCCCCATTCAGAACAAGCCGCTTCATCATCCAGCAGCTTCTAGGTTTCCTTAAACACAGGTTTCGTATTGTTCTGACACAACTACAGGAAAACAAAAAGAACACATTTGTTTTGATAAATGTTAAAGCCAAATGAGGTAAAACTAAAGGACTCTTTTGCCTTGTCTTGTGCTTTAGTAACACTAATCTCAATGTGTTCAACAACGTCCTTACATAAGGACTTGTGCCTCAGGACTCTTACAAATTAAACTCATCCTTCATTTTAACCAACATAATTAGCATCGGGAGTGGTTGGAATACAAACACTTACGAGCCATCACTCAGAGAGCTATTTGTTTAAGCCGACATGATTTTTGGAGGTAATTTCCCAAGTTGATTGTTTTTGGAGGCAGGCCAGCGCGAGAGAACGAGGCGCTCGCGGAATGAGCGATCCAAGACCACACAAGAGAGAAAATCACTCGGATTTATCTTACAACGGCTCTGATCTGAAAAAGAGCTAAGTTAATCTGTAAATTTCCCTAACTGCCCTTTATTTCGATGTCTACAGGAACGCATACAAGATGTGGCTCGCTTTGCTCTCTGTCCTGCAGAGGTGCACGCTTCGGCTTCAATGCATCTTTGCAGCGTTGCACACAATCACACACGCTTGATTCAGTGAACATAAAATATCCCACTCATTCTTGTATTTCACAACACTTAGCGTACACTGACACAATGTGCATTTGGAATTAATACTGATATATTTACAAATATATAAATCCACCCAATGAGCACACAAAACGGCACTGGAATGGAGGAGGCCCCTAACATCTTATAAAGGTCTATGAGACCTACGAAAGAACTGGGAGTGATTACCCCACTCCCATGACCACAGTATTTACAACACACATTTCCAAATCCTCCTCTGAATTCCGCTCTAAACTAAACATAGTGTATGGGAACCTCAGATGCTGATATGTTATGACAAGTACGATTTTTTGCTGCATGTCATTACAAGCAGGTCATGTCATCTCCGTTCAGACTTGTGGACAAAATATCAACACTGGAAATGGATGGAACACCTTTGACTATATAAACACCTACGCTGAAGAAACGACAATCTGTAACGGCGACATGAGGAGGTGTTATTGAGGGACACAGTGACCTCTCTCATGTGTGTTTTCAAGTATTATCAGGAGCATAAACGCAAAAAAAAAAAGCCTTCTGTGTATACTTTTTACCCATAAGATATTCTACACACGCTATGCTAACAGCTAACAGCTAATACTTTATCGAGGGGCTTTTTGAATGACACTGTTAATGAGAGTTTTATATCAACAAGTACTTATAATCATAACAGCCCTCTTTCTCGATGAGGAGCGGCCGAAATATGTAGCGGGTACGTCGGTCAGCTTTGAGCTCTTTTAAATGAGGGAATGGCAGATTCCTGTTGGGATCTCAAGAGTTTGTATTCATATATCAAGTCCTGGTCTGAATCCAGACTCAAACTTGGGTTCGGTCTCTGAATCCAATATCCCAACTGAAGTCCAGATTGTTAGTTTGATGGGTAATGTGTGGGCTGAACATACATATGATTGCTTTGAAGCACACTGCAGCAAGATTTCTCTTTGAGGACTTGAGGTTTTTGGTTGGAGGCCAGGGATTGCTATTGATTCTTGAAACAGATTCTGGCTGCTCGTCCACACTTTGGTCCAGTAGTCTTTATCTTTCCGTATGTCTAGTTGCGAATGTAGCCTTTAGAGACTCTGTCTTCCAGCGCCTTGCTCTGCGGTTCTGGCATTATTAGGTGTACAAATTGCTTGAATTCAGAGCAATGGTTTCAGCCTCAGTTTTAGCTCTTTGAGTAGTTTCTGAATATATGTTTCATGGCCAAGCTGGGAAAGTTCTGAAGAACTTTTTCAAAAAGAGCTCTTCAGATGATCCTTAAATCAAGAAATAAGCTGATGGATTTATGGAGATTCTGTATTTTTGATGTTGCATATCAGATCATATGTTCGATAATGGTCATGTGATCTTAAAATGTTGTTCATCAGTTGTTTAGTTCTGAGTTTGGATAATTTTTGAACACCTTATGAATCCATCCAGCATAGAAGGCCACATTCACGAAAATGGCTGGTCGGTTGTGTCGGGCACATCCTCTGCCGTTTATGCTCACGCCAACAATGACTTTACTGTTACTCTCTTGGCATATTAGAGGGCCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95689 True 3765 lncRNA 0.38 2 9824851 9828803

Neighbor

gene id symbol gene type direction distance location
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 141418 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 380828 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 534091 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 564232 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 643694 9177107 ~ 9195268 (+)
CI01000013_10261599_10283287 NA coding downstream 431468 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 507101 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 671887 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 757015 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 928124 10756927 ~ 10792761 (+)
G84120 NA non-coding upstream 2837 9821780 ~ 9822014 (+)
G84141 NA non-coding upstream 11285 9813128 ~ 9813566 (+)
G84134 NA non-coding upstream 18866 9805786 ~ 9805985 (+)
G84046 NA non-coding upstream 72893 9751611 ~ 9751958 (+)
G84023 NA non-coding upstream 165114 9659307 ~ 9659737 (+)
G84162 NA non-coding downstream 35042 9863845 ~ 9864164 (+)
G84163 NA non-coding downstream 35585 9864388 ~ 9864588 (+)
G84167 NA non-coding downstream 56864 9885667 ~ 9889683 (+)
G84171 NA non-coding downstream 72305 9901108 ~ 9903922 (+)
G84179 NA non-coding downstream 88002 9916805 ~ 9917663 (+)
G84005 NA other upstream 222616 9601611 ~ 9602235 (+)
G82581 NA other upstream 489903 9329329 ~ 9334948 (+)
G82168 NA other upstream 1783508 8028338 ~ 8041343 (+)
G81994 NA other upstream 2486612 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3742484 6075400 ~ 6081684 (+)
G84194 NA other downstream 201805 10030608 ~ 10036953 (+)
G84215 NA other downstream 247651 10076454 ~ 10079336 (+)
G84250 NA other downstream 386324 10215127 ~ 10215962 (+)
G84768 NA other downstream 2341186 12169989 ~ 12170818 (+)

Expression


Co-expression Network