G84194


Basic Information

Item Value
gene id G84194
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10030608 ~ 10036953 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95773
CCACGAATCAGTTGCGCACTGCAAACGCTGCATATGTGAAAGCACAATAGCGCTTGCTGCATATTATGTACTGCAAAGGCATGTTCACCTAAATGCCAGGTAAGGTGCCATTTTCCTTGCTTTACCCGAGGCAAAAAAAGCCATGTGTTGACTGTGTAACAGACTTTAAATTATATGCATCTATGGTGAAATTACTAGTTTTTCGCGTCAATACATGTTTATTTTAATGCGAACACTGCGCTATCGTTTTAATTCACCGCTCCTGGAACGCACTGTCGGACTGCATCCGTGTGCAGTGTGAACGCCCTAAAATCCATTAATATGGGCACGGAAAAAATACGCACTGCAACAGAGAATGTGTGAAACAGGCGTATGTGCGTGTGCGCCATTGCGCACAACGTTTGTATACTTTAACCACCTCCGAGGATAGTGGGGGTCGGGAGTCACTGGCATCATTTTTTTGGGGTGTCATGAGCTGAAAAGTTTGGGAACCCCTGATGTAGTCAAGCCAAAGGCTAATTATATTAATTACCGCTATGTGTCCAATATTGTAAAGAGCGATGCATTGTGCAGCGTTTACATCAGTAAGTTGACCGAGTGGATCTCTGAGCTGGTGTGAGTGAGTGGAGGTGGGGCTAATTTGCATATTCATTGATCCGTGAATACTAAATGAAGCAAGGGTGTAGGATTACATTCAAGCTATTTTAATGCATGAAGAATTTTTTTCACAGGAAAAAAACATTTAAATATGTCATTTTGGTGATCAAAGATGAGTTTTAAGGGATAAAATTATTGACTACAGGGGGACTTTAAATAAAACATTATTATCCTGATACACAACACCACCTTTAGGGTACAATGTTTGAACCATTGGGTGCACATGCTCCTCCAGAATGGTTCAGTAGTCCTTGACAGTGACCTGCCCATTTAGCACAAGTAGACTTATATAGGTGTAAAACCTCCAACACTATATTGGCTAGTGTTTCAGTTTCATTGTCCAACCACTGTATGTATGTTAAAAGAAAAAATATATTTATATACAATATAAATAAATATATATAGTGAAATACTAGACTTCAGAACAAGATATTGGTGGCAAAACAATGTTTTGAGTAATGTTCATTATGCTGTACAAAGATAAGCAAAAATGTCCGATGTCTCTTTTGACACTTTGCCACACTCATGACACAGTTAGAGTCCATGTTTTGTTGTGCCGACGTCTGTCTCTTTTGACAGCAACAAAAACACACCCTCTGCTGTGATGAATTATTCAGCAGTGTATGGCAGTGACACAGTGGCAGAACAGAAGGGGATGACTGCTGTTTTCCTCTGTTTAACAGGTTCTTAGTCTACCAAACAGCTTCCTGACAAGTGTTAATTCAACCTCAGGGGTGAACCTGACCTGTACTGACTACCCTGTATAACATAGTACAAAGCTCTATTATGACTCACAGTTTGCCCATTTTATTTTGTTCTCATAAGGTTTTCTGTCATGAGCACGGAAATGACTAGAATTAGATTGTGTGTGAACAGAATCTGGAATACGAAACAGATCGTTACCTTCCGAATCTGGCAGGTTCAAAGATTCAAGTCCTCTGCTTTTATCTGTCCCATTAGGAATGTTTTTCAGCTGAGGGACCTGAAATATGGCGCTGTCCACAGCATTAGTGCCCATGGCATCTTCGCTGTCCAGAGTGTATCCATCCCCATCAATCATTCTGTGGTTTGTTTTATTTGGCTGGAGTCGGGACTGTTGCACCGCAGCCTCGGCTGCAGCGATGGCGTTCCCGGCTTCTTCCAGGTGTGCTTGGGTGACGCTGCCTTTGCTCTGGCTGCGTGAGGGGCCGTGGGAACGCAAGTGACCCTCAGAGGAAGATTTGGAGCTGCCGGGACTACTGTGAGACTTTTCTATTGTAGGGACCTGTGTGTCTTTAGCGGGGTCAGGGAAAATGCCGTGACTTCGGCTCTTGATGACAGAGGTTTTAGGGGACTGCTGGTTCCCCGGTTGCCCTCCTTGACCTCCAGAACCTCCTGGCCCTCCAGGACCTCCCTGACTTCCAGGGCCACCCTGACCTCCAAGTCCCCCAGATCCACCGGGTCCCTGTGGAGGGTGGGTTCTTCCATGGTGAATACTCTCACTTTGCTCCTTTAGGGGGTGCCAGCGAGGTGTGTTATCCAGCTGAGTCGTGTTTGAAAGATCAATGAGCACCTACAAAAAACGTATTCATAATGTGTTAGATTATATTTGGTCTTCTGACTTCAGAGAAATTTCTTTCCTTTAGTCAACTATAAACTATTCTTTGGTGGATATTAATGTAAATAGATACTGACAGAAGCTAAAATGACTTAAGAATAACAAATTTCATAACAATAAAGAGGAAGAGAAGACAAAATGCTAGCATACTTTGAATC
>TU95771
GGGAATGGAAAAGAAATAGTGGAAGAGTGCGAGAATGAGAGGAAGGAAGAAAGAAAGACAGAACGAATAGGCTGTGAGCTCATGTGAAGTAATAAGGGTTACTTGGCTGGAGTCGGGACTGTTGCACCGCAGCCTCGGCTGCAGCGATGGCGTTCCCGGCTTCTTCCAGGTGTGCTTGGGTGACGCTGCCTTTGCTCTGGCTGCGTGAGGGGCCGTGGGAACGCAAGTGACCCTCAGAGGAAGATTTGGAGCTGCCGGGACTACTGTGAGACTTTTCTATTGTAGGGACCTGTGTGTCTTTAGCGGGGTCAGGGAAAATGCCGTGACTTCGGCTCTTGATGACAGAGGTTTTAGGGGACTGCTGGTTCCCCGGTTGCCCTCCTTGACCTCCAGAACCTCCTGGCCCTCCAGGACCTCCCTGACTTCCAGGGCCACCCTGACCTCCAAGTCCCCCAGATCCACCGGGTCCCTGTGGAGGGTGGGTTCTTCCATGGTGAATACTCTCACTTTGCTCCTTTAGGGGGTGCCAGCGAGGTGTGTTATCCAGCTGAGTCGTGTTTGAAAGATCAATGAGCACTTCTCCCAGGAAATCATTTGAGGAATATCTGTCATAATCCCACACAGTAACCTCCAGAGTTTTCTTCTTCAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95773 False 2412 TUCP 0.43 4 10030608 10036793
TU95771 True 652 lncRNA 0.54 3 10035201 10036953

Neighbor

gene id symbol gene type direction distance location
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 351768 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 591178 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 744441 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 774582 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 854044 9177107 ~ 9195268 (+)
CI01000013_10261599_10283287 NA coding downstream 223318 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 298951 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 463737 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 548865 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 719974 10756927 ~ 10792761 (+)
G84181 NA non-coding upstream 114955 9920024 ~ 9920246 (+)
G84180 NA non-coding upstream 116867 9918097 ~ 9918334 (+)
G84179 NA non-coding upstream 117538 9916805 ~ 9917663 (+)
G84171 NA non-coding upstream 131279 9901108 ~ 9903922 (+)
G84167 NA non-coding upstream 145518 9885667 ~ 9889683 (+)
G84216 NA non-coding downstream 42480 10079433 ~ 10081200 (+)
G84217 NA non-coding downstream 45341 10082294 ~ 10084049 (+)
G84242 NA non-coding downstream 80661 10117614 ~ 10117854 (+)
G84202 NA non-coding downstream 86807 10123760 ~ 10127752 (+)
G84265 NA non-coding downstream 149580 10186533 ~ 10187657 (+)
G84005 NA other upstream 432966 9601611 ~ 9602235 (+)
G82581 NA other upstream 700253 9329329 ~ 9334948 (+)
G82168 NA other upstream 1993858 8028338 ~ 8041343 (+)
G81994 NA other upstream 2696962 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3952834 6075400 ~ 6081684 (+)
G84215 NA other downstream 39501 10076454 ~ 10079336 (+)
G84250 NA other downstream 178174 10215127 ~ 10215962 (+)
G84768 NA other downstream 2133036 12169989 ~ 12170818 (+)
G84790 NA other downstream 2147989 12184942 ~ 12201975 (+)

Expression


Co-expression Network