G84299


Basic Information

Item Value
gene id G84299
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10286011 ~ 10287310 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95908
TGAAAATATATGAAGAGTTTGGTTCCAAAACGTGATAAAAAATGAGTTTCCGCCAAAATCAGTATTGTATCTGGTCGGTATTGAAAAGTCATTTATTAATTTTGCGCCAAATGCGATTTAATTCGTGTTATTCTGTCATGTTTTCTCCCTTTCTTTCCAAAACGCGACAAACGCCAGTCTCCCTTCTCTGCAGAGTGCAATATATCCGCTCAACCAATCACAGCGCACCATTCCACGCACTGTAAACAGTAATGGCGGCGCTCTGAATACACCCGGCATCCTAGTTTTCCTTATCTACTTTGTACTTTGTGATCAACAAAAACAGAAAAATTAATAATTTTGACGCCATTGATGAACCTGTGGTGGTTTCTGCAGTGGGGAAGAAACGCAAGTCATCAAAAAGTAACCATTTACGTGAGGAGATTAAGAAGATGAGTCACTCGAGTCGGGAGGAGGAAAAATGCCGGCTGTTGCTTGTTCCACGACAGCATCAAACTTCTGTCACGGTCCCCAAAACTGAATCATGAACAGGTTTTAAAAGCCGTTTTTAATACTAATGTACTCGGTAAATGTGTTTATTTTAACCGTGCGGTGGTGCCAGATACTTAATCGGTAATGACAAACAGAGACATAATTCATTTATAACATTAACAAGATGACTCGTTGAATTCATTTTGGTAGCGACGACTGAATGTATTTTTAGTCAAATGCCTGTATATAAGATTAGTATTGGCAAAGTTCAGAGGCTGTCATATATGTGAGTCAACTTACTTTGTTGTGTATTTTCAATATGAAAAATAACTTTTATATTGATGGATTAATTGCATTTTGAAAAAAACGTGTCATGGATTTATTACATTTTGGGAAAAAAATAATCTGTTTTTATAATAAACCTTTTAAAATCAAAACTTAGATTTTAATTTTTAATGTTTTTATAACCAAAAGATGCTATGTGAAAGTTTGAAACAGAAAATAGTGGTTTTCATCTTGCCACTTTCTTGGTAAAGAAAACACCTTTTTACTCAAATTAATCAAAATGGAGTTATAGCGTTTTGGAACCAAACTCTTCATATGCATCACAAAACTTTTTAATGTACATTCATTGACAATCTAAAATGCAAGTCATTTTTAACATTTTCTGTAGATAACATCTATCAACAGGAAAGACATTCTAGAATGCCTGCTTGCAAAGTACACATGCCACACAGCAATTACACATGGCACTTCAGTAAAAATACATTGTCAAAACATAAGAAAATGCATTATCCAATTAAGCCTTAAGAAGACTGCTGTGAGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95908 True 1300 lncRNA 0.35 1 10286011 10287310

Neighbor

gene id symbol gene type direction distance location
CI01000013_10261599_10283287 NA coding upstream 2044 10260271 ~ 10283967 (+)
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 602578 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 841988 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 995251 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 1025392 9243644 ~ 9260619 (+)
CI01000013_10335904_10336688 NA coding downstream 48594 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 213380 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 298508 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 469617 10756927 ~ 10792761 (+)
CI01000013_10808688_10819703 NA coding downstream 521378 10808688 ~ 10819925 (+)
G84289 NA non-coding upstream 31752 10253174 ~ 10254259 (+)
G84265 NA non-coding upstream 98354 10186533 ~ 10187657 (+)
G84202 NA non-coding upstream 158259 10123760 ~ 10127752 (+)
G84242 NA non-coding upstream 168157 10117614 ~ 10117854 (+)
G84217 NA non-coding upstream 201962 10082294 ~ 10084049 (+)
G84304 NA non-coding downstream 50188 10337498 ~ 10339002 (+)
G84323 NA non-coding downstream 61550 10348860 ~ 10350255 (+)
G84324 NA non-coding downstream 67373 10354683 ~ 10356731 (+)
G84325 NA non-coding downstream 70448 10357758 ~ 10380783 (+)
G84364 NA non-coding downstream 175510 10462820 ~ 10463073 (+)
G84250 NA other upstream 70049 10215127 ~ 10215962 (+)
G84215 NA other upstream 206675 10076454 ~ 10079336 (+)
G84194 NA other upstream 249218 10030608 ~ 10036953 (+)
G84005 NA other upstream 683776 9601611 ~ 9602235 (+)
G82581 NA other upstream 951063 9329329 ~ 9334948 (+)
G84768 NA other downstream 1882679 12169989 ~ 12170818 (+)
G84790 NA other downstream 1897632 12184942 ~ 12201975 (+)
G84864 NA other downstream 2077739 12365049 ~ 12375905 (+)

Expression


Co-expression Network