G308090


Basic Information

Item Value
gene id G308090
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 185337 ~ 186075 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU424184
tgtcctcgtccctgttcccatgtctctgtccaacgtccagttccctgtccagtctccgtcccctgtccagtctccgtctcctgtccagttccccgtccagtctccgtctcctgtccagttccccgtccagtctccgtctcccgttcagtctcccatccagtctctgtcctctgtcctgtctccgtttcagtccccggtcCCGACTCCTGTTTTCCCtggcctctccctgccgccagcccctGGGGTTCGTTTTTatgcgcctcgggagctgcgcgtttagggggaggcttctgtcacatcttggcctcgtctcgtgtctctatgtcttccccacgtgacctgtgctcccctgtgtctcctgtctcagtacttttccatgtgtgtctcatttgtagctccgccccttccccag
>TU424189
tgtcctcgtccctgttcccatgtctctgtccaacgtccagttccctgtccagtctccgtcccctgtccagtctccgtcccctgtccagtctccgtctcctgtccagttccccgtccagtctccgtctcctgtccagttccccgtccagtctccgtctcctgtcctgtctccgtttcagtccccggtcCCGACTCCTGTTTTCCCtggcctctccctgccgccagcccctGGGGTTCGTTTTTatgcgcctcgggagctgcgcgtttagggggaggcttctgtcacatcttggcctcgtctcgtgtctctatgtcttccccacgtgacctgtgctcccctgtgtctcctgtctcagtacttttccatgtgtgtctcatttgtagctccgccccttccccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424184 True 412 TUCP 0.60 3 185337 186075
TU424189 False 400 TUCP 0.61 3 185337 186075

Neighbor

gene id symbol gene type direction distance location
fam168a fam168a,LOC107600264,LOC107594362,LOC108264593,LOC107705757 coding downstream 597400 783475 ~ 841687 (+)
p2ry6 p2ry6,LOC107705774,LOC107601092,LOC107660676,LOC107735228 coding downstream 672973 859048 ~ 887291 (+)
arhgef17 si:ch211-248g20.5,arhgef17,LOC107660677,LOC107658857 coding downstream 708785 894860 ~ 1072523 (+)
relt relt coding downstream 898358 1084433 ~ 1155289 (+)
LOC103036410 fchsd2,LOC107705784,LOC107594367,LOC107600282 coding downstream 993482 1179557 ~ 1333842 (+)
LOC111191340 NA non-coding upstream 44835 138504 ~ 140502 (+)
G308071 NA non-coding upstream 104897 77183 ~ 80440 (+)
G308067 NA non-coding upstream 107912 24448 ~ 77425 (+)
G308066 NA non-coding upstream 163139 21629 ~ 22198 (+)
G308091 NA non-coding downstream 23503 209578 ~ 210009 (+)
G308092 NA non-coding downstream 31650 217725 ~ 217942 (+)
G308095 NA non-coding downstream 36526 222601 ~ 222907 (+)
G308112 NA non-coding downstream 107333 293408 ~ 293758 (+)
G308113 NA non-coding downstream 123896 309971 ~ 312776 (+)
serp1 NA other downstream 1641829 1827904 ~ 1832674 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other downstream 1831389 2017464 ~ 2020131 (+)
G308535 depdc7,LOC107758055,LOC107576633 other downstream 1945004 2131079 ~ 2143963 (+)
G308643 kifc3 other downstream 2133816 2319891 ~ 2338166 (+)
G308680 NA other downstream 2370252 2556327 ~ 2556569 (+)

Expression


Co-expression Network