G308091


Basic Information

Item Value
gene id G308091
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 209578 ~ 210009 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU424190
ggtctaaggcgctgccattatgagcaggaggtcgcaggttcgaaccccagctcatgcagctttgccatcaagctgccggcgtcagagggagcaaaaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcctagggtgatgtctgcagcacagggcgtctgtgagctgatgtaccggagccgagccgctgcgctttcctccaagcgcgctgtgatgctgctcggcaatgctgcatcagcagcagctcgaaaagaagtggtggctgacttcacatgtatcggaggtagcatgtgctagtcttcaccctcctggtgtgttggggcattactagtgatagggggagtcctaatgagtgggttgggtaattggccgtgtaaattggggagaaaaatgggaaaaatttgaaataaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424190 True 432 lncRNA 0.55 1 209578 210009

Neighbor

gene id symbol gene type direction distance location
fam168a fam168a,LOC107600264,LOC107594362,LOC108264593,LOC107705757 coding downstream 573466 783475 ~ 841687 (+)
p2ry6 p2ry6,LOC107705774,LOC107601092,LOC107660676,LOC107735228 coding downstream 649039 859048 ~ 887291 (+)
arhgef17 si:ch211-248g20.5,arhgef17,LOC107660677,LOC107658857 coding downstream 684851 894860 ~ 1072523 (+)
relt relt coding downstream 874424 1084433 ~ 1155289 (+)
LOC103036410 fchsd2,LOC107705784,LOC107594367,LOC107600282 coding downstream 969548 1179557 ~ 1333842 (+)
LOC111191340 NA non-coding upstream 69076 138504 ~ 140502 (+)
G308071 NA non-coding upstream 129138 77183 ~ 80440 (+)
G308067 NA non-coding upstream 132153 24448 ~ 77425 (+)
G308066 NA non-coding upstream 187380 21629 ~ 22198 (+)
G308092 NA non-coding downstream 7716 217725 ~ 217942 (+)
G308095 NA non-coding downstream 12592 222601 ~ 222907 (+)
G308112 NA non-coding downstream 83399 293408 ~ 293758 (+)
G308113 NA non-coding downstream 99962 309971 ~ 312776 (+)
G308124 NA non-coding downstream 188948 398957 ~ 399274 (+)
G308090 NA other upstream 23503 185337 ~ 186075 (+)
serp1 NA other downstream 1617895 1827904 ~ 1832674 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other downstream 1807455 2017464 ~ 2020131 (+)
G308535 depdc7,LOC107758055,LOC107576633 other downstream 1921070 2131079 ~ 2143963 (+)
G308643 kifc3 other downstream 2109882 2319891 ~ 2338166 (+)
G308680 NA other downstream 2346318 2556327 ~ 2556569 (+)

Expression


Co-expression Network