G308643 (kifc3)


Basic Information

Item Value
gene id G308643
gene name kifc3
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 2319891 ~ 2338166 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU424887
CCATGAGCGTTTTGCTGTCCCCACTGAGAGAGTCCTGCAGCAGGTACGTGAGGCGAGAGTTGCGAAAGGGAACGTGCGAGTGGCGCGAGCGAAGAGCGTTAATGACGTCGCCGAGGGCTGACAGAGACTTGTTGATGCACTGAGCCTCGCGCAGGCGGCTTCCCTCAGCTCCCGACTTCGCGATTCGCTCAGAACCTGCCAGATCCACAAGGTTCAGTTTACCTGAGGTTCTGTGTCCTGTAGAGGAGTTAAATCCAGCAACAGTGATGATAAGAAGAGCGTGAGAGCGAGAACTGTGTTCGTTGAGGTTCGTACATGCCGTCGCTCGGTTCATGTGACCCAGTTCAAACACCCTGTTAATGTCCTCCACGCTCTCTACTGAGAACTCAGTCAGACCCGGTACGTACAGCTGACCACTTCCATCTGGACACATCTTAATGTCCAGCTTCTCGCTCGGGTTGTCTCCCAAAAGATTCCGTAAAGTCTCGTTGTAAATCTCCACCATGCTGACGGTGATATTATAATCCCAGTCAGGCTTTTTCTCAGAAACCTCGGAGAACAGCAGACGCAGGGCTCTCTGGTTAATGCCAGGGTCCTCAGGAACACCCTCCATGGTGTAGGTCTTTCCTGAGCCAGTCTGTCCGTAAGCGAAGATGCACACGTTAAAGCCGTCTATGCAGGACGTGACCAGTGACTGAACTTCCTGAAACAcCTCGTCCTGCGTGATCTGAGGAGGGAAAACCTTGTCCAGCTCAAACGTCATCAGCTTTCCCTTGTTGGAGAGGTAGAGCACAGCATCGTCATCCGAGTCGAAGCTCACCATGGTCTTACTGTCCGACTCCGCCTCATCCTGACATACAGGACGCACTCGGCAAAACACCCGGATATTTCCTTTGAGGCGCACCAGTTCATTATGACACTTCTTCCTCAGGTTCATCTCTCTCTTGTATTTGCGAAGCAGCTCCTGATTGGCACTGCTCACTTCTCCAATCACCTGACAGATCTCCTGTTTAGCCTCAGCAATAGCTTTCTCCAGCATGTAAGGAAAGTCCTGCACCTGCCGCTTCAGACAGTTATAATCACAGGTGAGAGTCCTCAAAGCAGGCTGCAGGGTCAACAGGTTCATCCGCACACCTGCGAGGTTCTCATGCACAGCCTTCATTTCACTCTCAGCTCTGATGAAAGCCTCTTCTATCACcctgttcttctcctcctccagattctgtagctccgcctccagCTGGCCTTGAGCTCGCTCCATCTCACCCTCATACACCAggatCTGTTGGCGTAACTGGCTGCTGGTCCTTTGGCTTTCATGcagctgctgctccagctcacgGAGGAGCTCCCGCTGGACCCCAAGTTGCTCCTGGAGAGCCTGGTTACGTGCCTGAGCCTCCACCAGAGCCTGCTTACACTGAGCCGACTCCACCTCGACTGTCTTCGTCACATACTTGATCTGTGGAGGTGCGGCGGCCTGCCGGCTGAGAGCTTCCTCTGCGTCTCTGAGTCGAGTGCTGAACTGCTGCTCGCTCTCGGCCCGACTCCGCAAAGCCTCGTCCAACTGCTGCTGGATCTCCTGCCTGTACCGCGAGGCCTCCTCCAGCTGCTCCTGCAACTGAGCAACCAGAACCGTCCGCTCCTGCACCTGCTGCTCCAACACCGCCAGCCGCCGCTCTCGCTCCCGACACATCTCCTCACGCCGAGACAGCTCCGCCCGCAACACCTCTG

Function

symbol description
kifc3 Predicted to enable ATP binding activity; microtubule binding activity; and minus-end-directed microtubule motor activity. Predicted to act upstream of or within microtubule-based movement. Predicted to be located in microtubule. Orthologous to human KIFC3 (kinesin family member C3).

NR:

description
PREDICTED: kinesin-like protein KIFC3 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424887 True 1734 TUCP 0.55 11 2319891 2338166

Neighbor

gene id symbol gene type direction distance location
eif3m eif3m,LOC107602127,LOC107671036 coding upstream 83008 2221969 ~ 2236883 (+)
cstf3 cstf3,LOC107671440 coding upstream 206907 2076601 ~ 2112984 (+)
LOC103031553 pcyt1a,LOC108440592,LOC108264716,LOC107091881 coding upstream 472307 1834677 ~ 1847584 (+)
LOC103029868 NA coding upstream 529015 1787316 ~ 1790876 (+)
omp omp,ompa,LOC107660685,LOC107735103 coding upstream 569648 1745320 ~ 1750243 (+)
pex16 pex16,LOC107753012,LOC107669959,LOC106593118 coding downstream 655902 2994068 ~ 3009972 (+)
LOC103038331 LOC108433450 coding downstream 680993 3019159 ~ 3035820 (+)
cep126 NA coding downstream 732070 3070236 ~ 3107407 (+)
G308645 NA non-coding upstream 18653 2300942 ~ 2301238 (+)
G308640 NA non-coding upstream 54358 2246311 ~ 2265533 (+)
G308549 NA non-coding upstream 112099 2198840 ~ 2207792 (+)
G308552 NA non-coding upstream 124587 2194991 ~ 2195304 (+)
G308521 NA non-coding upstream 231722 2087108 ~ 2088169 (+)
G308649 NA non-coding downstream 15961 2354127 ~ 2409980 (+)
G308658 NA non-coding downstream 69746 2407912 ~ 2410615 (+)
G308659 NA non-coding downstream 72511 2410677 ~ 2413833 (+)
G308662 NA non-coding downstream 79745 2417911 ~ 2429301 (+)
G308668 NA non-coding downstream 102723 2440889 ~ 2469996 (+)
G308535 depdc7,LOC107758055,LOC107576633 other upstream 175928 2131079 ~ 2143963 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other upstream 299760 2017464 ~ 2020131 (+)
serp1 NA other upstream 487217 1827904 ~ 1832674 (+)
G308090 NA other upstream 2133816 185337 ~ 186075 (+)
G308680 NA other downstream 218161 2556327 ~ 2556569 (+)

Expression


Co-expression Network