LOC103038331 (LOC108433450)


Basic Information

Item Value
gene id LOC103038331
gene name LOC108433450
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 3019159 ~ 3035820 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665993.1
TCAGCAGCCATGTTTCAGACAGTAGGAGGAGATTACAGAGAGTTAGAGGAAGAGAAAGTTGTTTATCCATGCAGAAACACTGACAGGAGAGGAGATGAGTGAGGACGTGTTTGAAGTGCCGGCGAGGAACGAGTACCGTTACCTGGTGCAGGacgagggggaggaggaggtgcAGTATGTGCGGCGTCACTACGTCAGCCCGTTCCTGGTGCTCTCCAGGAGGTGCATGTTTTTAATAGCTTGCGGGGTCCTCGCTTTACTCGCCCTTGCTGGATATTTGGCTTATGTGGCCCAGACTCCGCCCCCTGGCTTTGCGGAGGTGGTTACGGACTTCGGTTGGCTGCGGGGACGCCACCAGGGCGGGGCTTATTCCTTCAGTGGCATCCCGTACGCTGTGCCTCCTGTTGGTGAACTCCGCTGGAAGCCGCCGGAGGATCTGAAGCATGCTGGGAAGTGCTGGCACGGCGTTTACGACGCTACATACGTACGTAACGTCTGCGCGCAGATACAGCCCCTGGAGCGAAATGGTTCCGTGACCGGAAAAGAGGACTGTCTTCATCTGAGTGTGTTCACCCCCAGTTTACGACCCGCCGAACGCCTGCCGGTCATGGTGTGGTTCCACGGTGGGtatctgcacatgctcagtgggCAGGAGAAAGGATACTCGCCCACAGAGCTGGCGGCACAAACCAACACCGTGTTCGTCAGCCTGAACTACCGGCTCAACGCCTTCGGCTTCATGGCTCTGGAGGTTCTGAGGGAGGGGTCGCCCACCAACACCTCAGGTAACTACGGCTTCATGGATCAGATCCTGGCTCTGCAGTGGGTTCAGAGGAACATCCATGTGTTCGGTGGAGATCCAGGAAAAGTTACTATATTTGGCCAGAGTTCAGGAGGAACATCAGTATGGACGCTGATGATGTCACCGCTAGCGAAGAACCTGTTCCATCGAGCGATCGATATGAGCGGGTCGTACGTGTATAACGCTTCTCTGGAGTCAGCTGAGAAAGATAATCTTGTTTTCCTGAGAAAAACCGGCTGCAGAGACGCCGCCTGCCTCCGAAAACTCAGCGCAACCCAGGTCCTGCAGGCCATCCCGTGGGAGGAGTATCCGTACTGGGCGGCGGAGGATCTCACTGATATCCCGGTTAAAGGGCGTTTCTGTGGTCCGGTAGCCGTAGTGGACGGTCAcgttcttcctcttcctccgtTTGAAGCCTGGAAGAAACCCGGGCAGTTTAATGATGTGCCGTTTGTGGTGGGAACCACGCAGCAGGAGGCCGACTACAGCCCCATAATGAAGAACATTTCTCAGTGGACCTGGGCAGACTATGAGTGGTTTGTGAGAGagaagCTGAGCCCGTTTGGAAATGTGTCGGTGTCTGAAGCTCTGAGGCTCTATAACAGCTCGGCTCCCTGCCCAATCAACGACCGCTGTCCAGAAAGACTCTACACCACCCTGGTGTCGGATATGAGGGTCACCTGCCCCAATAACGACCTGGCCAAACGAGCTAAAGaTGCTCTGAGCAGCCCTGTGTATCGCTATATAGTGACCTACACTCCGTCCAAAGCCGTAGACTTCGCCCCCTGGATGCCGTTCCCAAGCCGCTTCTCCTTCCGTCTGCTGGACAGCCTGGCGTTCTTCAGCAGCCTCGAGATGGTGCTGGGGACCATGAGCCCTGAAGACAAGGCTTTCCAGGATCTGCTCACCAAATACTTCATCTACTTCGCAAAAGAAGGTAAGATGCCGGCTGATTGGCCGGAGTTTGTCTCGGGGACGGCCCTGCTGGATAAATCTCTCCGAGCGGAGCGGGACCCGTTCTCAGAGAGGTGCAGACTCTGGGAGGAACAGGACTTTTATAAATACGCTTGGATTAATTAATAACACgtacacatataaatataaa

Function

NR:

description
PREDICTED: para-nitrobenzyl esterase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665993.1 True 1907 mRNA 0.55 9 3019159 3035820

Neighbor

gene id symbol gene type direction distance location
pex16 pex16,LOC107753012,LOC107669959,LOC106593118 coding upstream 9187 2994068 ~ 3009972 (+)
eif3m eif3m,LOC107602127,LOC107671036 coding upstream 782276 2221969 ~ 2236883 (+)
cstf3 cstf3,LOC107671440 coding upstream 906175 2076601 ~ 2112984 (+)
LOC103031553 pcyt1a,LOC108440592,LOC108264716,LOC107091881 coding upstream 1171575 1834677 ~ 1847584 (+)
LOC103029868 NA coding upstream 1228283 1787316 ~ 1790876 (+)
cep126 NA coding downstream 34416 3070236 ~ 3107407 (+)
G308782 NA non-coding upstream 58349 2960605 ~ 2960810 (+)
G308780 NA non-coding upstream 104882 2913905 ~ 2914277 (+)
G308769 NA non-coding upstream 106909 2864578 ~ 2912250 (+)
G308777 NA non-coding upstream 117333 2901256 ~ 2901826 (+)
G308768 NA non-coding upstream 154878 2853499 ~ 2864281 (+)
G308680 NA other upstream 462590 2556327 ~ 2556569 (+)
G308643 kifc3 other upstream 680993 2319891 ~ 2338166 (+)
G308535 depdc7,LOC107758055,LOC107576633 other upstream 875196 2131079 ~ 2143963 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other upstream 999028 2017464 ~ 2020131 (+)
serp1 NA other upstream 1186485 1827904 ~ 1832674 (+)

Expression


Co-expression Network