trnal-aag_11


Basic Information

Item Value
gene id trnal-aag_11
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172914.1
NCBI id APWO02000140.1
chromosome length 931882
location 924948 ~ 925029 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-aag_11
GGTAGCgtggccgagcggtctaaggcgctggaTTAAGGTTCCAGTCTCTTCGGGggcgtgggttcgaatcccaccGCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-aag_11 True 82 tRNA 0.63 1 924948 925029

Neighbor

gene id symbol gene type direction distance location
trnal-aag_10 NA coding upstream 131 924736 ~ 924817 (+)
trnal-uag_6 NA coding upstream 457 924410 ~ 924491 (+)
trnal-aag_9 NA coding upstream 1013 923854 ~ 923935 (+)
LOC103024700 LOC108443184 coding upstream 305819 615018 ~ 619129 (+)
abcc3 abcc3,LOC106589510,LOC107653990 coding upstream 321832 532292 ~ 603116 (+)
trnal-aag_12 NA coding downstream 291 925320 ~ 925401 (+)
trnal-aag_13 NA coding downstream 663 925692 ~ 925773 (+)
trnal-aag_14 NA coding downstream 877 925906 ~ 925987 (+)
trnal-aag_15 NA coding downstream 1203 926232 ~ 926313 (+)
trnal-aag_16 NA coding downstream 1417 926446 ~ 926527 (+)
LOC107197833 NA non-coding upstream 129242 783759 ~ 795706 (+)
LOC111191818 NA non-coding upstream 284836 632816 ~ 640112 (+)
G331526 LOC108273747,LOC103382276 non-coding upstream 480755 440253 ~ 444193 (+)
LOC107197834 NA non-coding upstream 515762 391252 ~ 409186 (+)
LOC111191824 NA non-coding upstream 533716 384429 ~ 391232 (+)
LOC103021777 LOC108424855 other upstream 542164 371490 ~ 382784 (+)
G331504 NA other upstream 657188 266867 ~ 267760 (+)

Expression


Co-expression Network