CI01000016_00042281_00046080


Basic Information

Item Value
gene id CI01000016_00042281_00046080
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 42244 ~ 46182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00042281_00046080.mRNA
GTATATAAAAGCTTCTTTTAGATGAGAAACATCAGTCATGGACCACATCCTCCCTGTGATCAACAGTGCTCCAGATCTTTGGTCACCATCCATGACCATGAACTATGAAATCCCCAAACCATTTAACAGTAATGCTGAACTGGGGGCAACAGAAAGAGCAAGAGGGAAAAACTGCAATGATACAACAAGACGAAAGAGAACAAAAGAGATGAAGCAAGCAAAGAAAGAGGCACAAACAAAAATAGCTTTGTGCTACATTGTTTCGACATGTTACATAAAATTTGTACATCCAAGTTGGATAGATCACAAAAGAACTCTGACCTATTCATCTCACAACTCATCTGTTATCTTTGCAACCGTTCCAAGATCAGCCCCACATTACAGCACCTACACTGGGCGCATTTCCAAAGAGAGAGAACGAGAGAACAGAGAGAGAAGAGAATCAGCTCCTTGGTTCTACCTAGACCCAGAACCTGACATGACCTGGAAAACGAGCTCTACGAATCTGTTCAAGCTTCACTCCCAGACTCCTTCATATGCTACGAATGATGCTGGTTATTTTACTCCAAGTGTAATCTTTGCCAAAGGAGATTTGGTGGTTCCTACACTAATTAGTCGCACGTCTCACACCATTAAGGTGGCAAGAACTTCATCCAACATATTTAAAAAAGCAGGTGCTACATCTCCAGGTTGCACAATTGTTGGGACAAAAAAAACGTTTGTTTAAAATAGCACCAGCAAGCTTTAGAAAAGACCAGAAGGTAAGACCATAAATAGAAGACAGGCAATTATCTGAAAGGCGCTGATGGAAAGGATAGATAACAGGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00042281_00046080.mRNA True 829 mRNA 0.41 4 42244 46182

Neighbor

gene id symbol gene type direction distance location
CI01000016_00104268_00104615 NA coding downstream 54355 100537 ~ 105049 (+)
CI01000016_00116237_00122376 NA coding downstream 68981 115163 ~ 123774 (+)
CI01000016_00200989_00201760 STMN1, STMN1A, STMN1B coding downstream 154539 200721 ~ 202139 (+)
CI01000016_00206576_00207640 PAQR7B coding downstream 160394 206576 ~ 207935 (+)
CI01000016_00229474_00234707 KCNV1 coding downstream 183240 229422 ~ 234915 (+)
G93071 NA non-coding upstream 14348 23660 ~ 27896 (+)
G93070 NA non-coding upstream 26343 14060 ~ 15901 (+)
G93072 NA non-coding downstream 10297 56479 ~ 56936 (+)
G93133 NA non-coding downstream 83131 129313 ~ 130160 (+)
G93086 NA non-coding downstream 107781 153963 ~ 154680 (+)
G93143 NA non-coding downstream 130817 176999 ~ 187671 (+)
G93149 NA non-coding downstream 136146 182328 ~ 251574 (+)
G93406 NA other downstream 859218 905400 ~ 927532 (+)
G95439 NA other downstream 3815993 3862175 ~ 3862305 (+)
G95648 NA other downstream 4226454 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4788376 4829592 ~ 4837457 (+)
G95792 NA other downstream 5173698 5219880 ~ 5225941 (+)

Expression


Co-expression Network