CI01000016_00104268_00104615


Basic Information

Item Value
gene id CI01000016_00104268_00104615
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 100537 ~ 105049 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00104268_00104615.mRNA
CTATAAAAGCATAGAATTACACCTTGTGACTGTTCTCAGAACAAGGACCTCACGTGGATGTCCACATGCCACACCCTGTTGCAGGCCTGCTGTCTGTTGGCTCGGGGAAGTTTGTGCTTGTGTGGACACTGTGATTGAATTACCACAAAAAAGTGTTCGCTCTAAATCTGAACAAAGACATGAGCTTTTCAATTTTGTGTAAGTACACAGTCCAAAAGCAAAGCTGAATTTGGACAAAAGAGTAGAACAAATAAATAGGCTTTAGGGTTTGAGATATCAAAAAAGAGAAAAGGAACAAATGCATTAATAGCTATGTAATACAAAAAACAAAACAAAATATTATTATTTAAATAAATAAATTATGTATATAGTACTGTTCAAAAGTTTTCTTCATTTTTTAAAAAGAAATTTAATACTTTTATTCAGCAAGGACACATTAAATTGATCAAAAGTGACAGTATAGACATTTACAGTGTTACAAAAGATTTCGTTCAAATAAATGCTGTTCTTTTGAACTTTGTATTCAAAGAATCTAGAAAAAAAAAAATGTATCAGTTTCCGCAAAAACATTAAGCAGCACAACTGTTTTCAACACTGATAATAATAAGAAATGTTTCTTGAGCATCAAATCAGCATATTAGAATTCTGATTTCTGATGGAATAAATTACATTTTAAAATATATTAAAATAGAAAGTTATTTTAAAGTTTAATAATATTTCACAATACTGCTGTTTTATTTCGCTCAAATAATTACAGCCTTGATGAGCAGTGAGACATTTATATATTAAAAAAAATATATATATATATATATTAACAACTCCAAACTTTTGAATGGTAGTATACATATATGGTGGCATTTTAAATCACCCTATCTGTTTTTATAGTTTCACAGCCCTCCAACCCTGATATATATTTCAAAGCAGCTACTTTAAAATGCCACGGGAGGAAACAAGTCAAGTCATGTAACATTTATATATATAGTGCTTTATACAATTCAGACTGTTTCAAAGCAGCTCCACAGTAATAAACAAGAAAATAGTGTTGCAACAGAGCAAAACAGGCCTAAAGGGGTCATGAATTGAGAAATCTAATTTTCCTTGAGTTTTTGATATATCAAAAATATACTGTAAGTTTCAGAACTGAAAGCTTTCTTATTAGTCCAAAAACAGGAAAACCAAGCCCAGATTACGACTGGTTGAGGAATGTGCCTATTTATACGTCATAGATAGTTGAAAGACCGCCTCTGCAGAAGAAGATCAACGCCTACATCGTTACTACTGTAGCCGGTAAGTGTACAGATTATGTGTACATGTCTAACCAAAATCACCAGTGATCAGTGATTTTTGATATGTAAAGATTCATGTACAGTCAGATGTTCTTTGTCTCAGAATCGTTTATAGTCAGTAAAGCAAACTAGTGACTAAGGGTGTTTTCACACCTGAGCGCTTGTTTCGGAAAAACCAGGTGTGTTTTCTCCCTTGTTCGTTTAGGCATATGTGAACACAACAATCGTGCTCGGACTCGCACCAAAACAATCACTCCGAGATCACCTGAGCGAGGTGGTCTTGGCTCAACTGCAAACGAACTCTGGAGCGGTTCGCTTGTGGTGTGAAAGCAATCCGACCCAACGGACCAACGAATTCATATACTAGTGTTTGCATGTGTCTCGACAAAGTCTATTAGACAGCGCTGGGAGATACAGAGAGATCGAGCTTGAATCAGTATGAATGTAGTACATAATTTAACAGCGGGAATTCGTATAGTGTTTGGTGTGTCTCGACAGTAGGTACTAAACAAGCTACAATATGCTCATGATGCAAACTTGTCAATCATTTTAATGGATGATGCAGAGCAAACTCTGACCAATAAGGGGACAGTTGTACACGCATGTGACTTGCATCAACACATTTTGGTACACTTTGAAATATTGCCTTGTGAAAGCAACCCGAACCAAGAAGAAAATGCAACATTGTAACAAATTAAGTCCCTGTTTCGGAACAACTGATCTACAGGTGTGAAAACACCCTAAATGGTCAACTTCACATTGTTTCTCTTAGTAGGCTGAAAATAATCTTATTTAAACTGTGATTCAATTATATCAAAGAACGCTCCCTTTACAATCACTGAAGCTGTCAATCAAACAGCACAAGATTGTCAGTGACTGAGTTCTGGACTCCCTTTAGAATCAACGAATCTCTTGTTTACATTGTGTTTGCACTGTTAGTTATAATGAAAGCATTTGTTAGTGTGCAGAAATCGAGTTACAATGAAGAGATCACTACATGTCTGTCATCGGCTATATGCTCATCACTGCAAACTTTCATGCCATGATCTCAATATAATGCTATAATCAACACTATTCACAATTAGTAAACCTTGAGAACTGTAATAGTAAAAACATGCTAAAAGTTTGAGACTTCCACATGTAATACTTAGCTATTTTCATATGCAAAGATGTTAGCCAATCACAGCAGTGAGTGTTTACATTCAAGTCTCACAGTAGACACGCCCCTTAAAACAGCGTTCAAATCAGAGGGCTAGGAAAAATGCCTTTTATTTCTAAATTATGACAATTTTTGATGTAAAAGTCAGACTAACATTATAAATGCACCCCAGGAAACATAAAATAATAAAATAATGCAGTTCATGACCCCTTTAAAAACGTGGGGCTACACTTATCTGGAACCATGCATCACAAGAAAGACTTGTAAAGCACCACACCCGCTGAATAACTCTATGAACTATTTGGTTTACCCCATAGACATTCAGATGCTGGCAGACAGACTTGTGAACAGGGGAGTTCAAGAGGCTTTTTGTGTTTACTTTGATTAAGGAGCAACAAGGGCAAATCAGGTCAGCAGGTCTTCAGTTTCACCAGCCCAAGGTGCTTTCTGAGCAGGTATGCGTATCAGCAAAAAAGCACAAGCCATGCTGGATCTGTTTTATTTGTTCTGCCTCACCTTATTTAGAACAGAAATTAACAGTTTTAAATGAATAGTTCACCAAACTATATTAACTACAAATACGGTTTTCTGATGCTTTCAAGCTTCAAAAAATGGATGTAAAAGCACCATAAAAGTATCATAAAAGTTCTATGTGACTTTTCAATTCAAGTTTATTTGCATAGTACTTCTCACAATACATATTGCTTCAAAAGCAGCTTCACGGAAAATGCATGTTTTGATGTTACTTGCGCACTATTTTCCAGATCTTCTGACGTCATACGATAGCTTTGTGTGAGGAACAGACCAACATTTAAGTCATTATTAACTAAAAGTCTTTACATCTGTCTTAGCATTTATTGGTGCATTCATATGATTGATGAATCATTCTATTTAAACCAGTTCACAAAATCAGTCTAAATGGCTCATTCACAAACTGGATTGATATGGCTCACTGAAAAACATGTATTTCTGGTCAATTTCTTACACAAAGCTAGCATATGGTTTCACAAGACTTGAAATACAGAACACAAGTCATATGGACCACTTTTATCATACCCTTATGGTGCTTTTCATCCTTTTTAAAGCTTGAAAGCTTAATTGCACATTCCTTGTAATTGCATGGAAAACAGTCTTCAAAATTTCTTCTTTTTCATTCTATATGCAAGAAACGGAGTCATACCAGTTTAGAACAACTGAGTAAATAATGACAGAATTTTCATTTTTGATGAATTATTCCTTTAAAAAGTTTTAGACTGGTTAGATAATAAAGAAATACTAGGTGACACATGCCTACTTCAAGCGTACTGCTAAACACGGCCATTCAGGGCTTCCATAGTAACCCGAGACAAAGAATGAGAAAGATGAGCTGTGCGAGTTTCATTCATTTACATTCACGGAGGAACAAGTGGAACGGCTCAGTCTTCCAAGCCACCCACAACATCGTGTTCACGGGCCCGTCAATCACCTCACCCTTCGGCTTTCAGAGCACAGGGCTGATAGGAAAATTCCGCCCACATCAGGAAGTGAAGCAAGCAGAGTCTCTAATGGGGAGCGACGGTGAATCAGATGGCCCCCAGAACTCTAACAAGCGCACGGGCCGGCCCACACAGCCGCCGCTGAGCGCTCTGATATGATTAGTCATACACCGGCTGCATTTCTGAGCTTTTTTATTCCCTCGTTACCGCCACCTCTCAGGTCTCTCCTGGCTTTAACCTTCCAAAAACAAAGCAGCGTTAATGAGGAAGCCTCTCTGGGCTTTTCAGATGTGCACTTTACCTTCCACATCCTCTTCTTGATGGAGGGATTCTCTAAGTCTAAGACATGGAATATAAGGGCCTCGGACACCACAAAGAGCTCTAGCTCACCAAATTTAACACACTAGCACAGAGTTCAAGAAGCACTGTTTTTTGCCCTAAAGATCATACAAATCACACAGCCTCAGGTGGTTTCAACTCAGCAGGTTCTTACAACTGAAACAATTAGTTAACTGAAAACAGTTATGGATAACAACTCGAAAACACTTTAAAAGCTAGTTTATGAGCTGTAGAACCTATCACATGCGAGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00104268_00104615.mRNA True 4513 mRNA 0.37 1 100537 105049

Neighbor

gene id symbol gene type direction distance location
CI01000016_00042281_00046080 NA coding upstream 54355 42244 ~ 46182 (+)
CI01000016_00116237_00122376 NA coding downstream 10114 115163 ~ 123774 (+)
CI01000016_00200989_00201760 STMN1, STMN1A, STMN1B coding downstream 95672 200721 ~ 202139 (+)
CI01000016_00206576_00207640 PAQR7B coding downstream 101527 206576 ~ 207935 (+)
CI01000016_00229474_00234707 KCNV1 coding downstream 124373 229422 ~ 234915 (+)
CI01000016_00294886_00298452 NA coding downstream 189837 294886 ~ 299161 (+)
G93072 NA non-coding upstream 43601 56479 ~ 56936 (+)
G93071 NA non-coding upstream 72641 23660 ~ 27896 (+)
G93070 NA non-coding upstream 84636 14060 ~ 15901 (+)
G93133 NA non-coding downstream 24264 129313 ~ 130160 (+)
G93086 NA non-coding downstream 48914 153963 ~ 154680 (+)
G93143 NA non-coding downstream 71950 176999 ~ 187671 (+)
G93149 NA non-coding downstream 77279 182328 ~ 251574 (+)
G93215 NA non-coding downstream 179151 284200 ~ 284433 (+)
G93406 NA other downstream 800351 905400 ~ 927532 (+)
G95439 NA other downstream 3757126 3862175 ~ 3862305 (+)
G95648 NA other downstream 4167587 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4729509 4829592 ~ 4837457 (+)
G95792 NA other downstream 5114831 5219880 ~ 5225941 (+)

Expression


Co-expression Network