CI01000016_00206576_00207640 (PAQR7B)


Basic Information

Item Value
gene id CI01000016_00206576_00207640
gene name PAQR7B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 206576 ~ 207935 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00206576_00207640.mRNA
ATGGCAACGGTTGTGATGGAGCAGATTGGTCGGCTGTTCATCAATGCACAGCAACTTCGCCAGATCCCACGTTTCCTGGAGTCAGCCTTCCCAAAATTGCCTTGTACTGTGATGGTGAGCGATGTGCCGTGGGTTTTCCGCGAGTCACACATATTCACAGGCTACCGGCCGCCTGACCAGAACTGGCGCTACTACTTCCTCACTCTATTTCAGAGGCATAATGAGTCTGTAAATGTGTGGACACACCTGCTAGCCTCCCTCATTATCTTGGTCAAGTTTCAGGAGCTGTCTGAAACCGTGGATTTCCTGCGAGATCCACACGCCCAGCCACTGTTCATCTTGCTCCTAGCCGCATTCACCTACCTGGGCTGCAGTGCGCTGGCCCACCTACTCTCAGCCAAGTCTGAGCTCTCCCATTACACCTTTTATTTTTTGGACTATGTGGGCGTAGCCGTTTACCAGTATGGCAGCGCCCTGGCCCACTTCTATTACGTTGTCGAAGAAGAATGGCACGCTCAAGTACGAAGCTTTTTCTTGCCAGCTTCAGCCTTCCTGGCCTGGCTGTCCTGTACGGGCTGCTGCTACGGCAAGTACGCCAGCCCGAGTTTGCCCAAGTTCGTTCACAAGCTATTCCAGGTGGTGCCCTCGGGCCTAGCCTACTGTTTAGACATCAGTCCGGTGTTTCATCGCATTTATAAATGCTACAGCTCCGAACAAGGCTGTGCTGACCAGGCGGTGGTCTACCACTGCTATCAGGTCCTCTTCTTTTTGATCAGCGCCTACTTCTTCTCGTACCCCCATCCTGAACGCTGGCTCCCGGGACGTTGCGACTTCATCGGACAGGGCCATCAGATCTTCCACGTGTTCCTTGTGCTCTGCACTCTAGTGCAGATCGAAGCTGTACGACTGGATTACAGCGAGAGGAGACCTCTCTATGAACGTCTTCATGGTGACTTGGCTCACGATGCAGTGGCTCTTTTTATCTTCACAGCGTGTTGCAGCGCACTCACTGCGTTCTATGTGCGCAAACGGGTGAAGGCGTATCTAGAAGAGAAGCAGGAGTAGATGTCATGGCGGGGACCTTGCTTGCACATGTAGGAGGGATTGCACTGGTCTACAACAACTGAAGCAACTAACAATGAAGGACCTTCGTCGTATTTTTCAGTGTATCTTATATTTGTTGTTGGTTTTGTTATGTGGCCTGCCAGTGCATTTTGAACCAACTGCTTTCTGTTTACCAAACTGGTGACATGCTTTAAAACCGCATTACTCATGGAGAATGGCTATAAAACAATGGATTGCCTGCTGGAAGGTGCTCAGTTCCTAAGCGGATCTGTTTGACGAGTGCCATTACAACCTA

Function

symbol description
paqr7b Enables steroid binding activity and steroid hormone receptor activity. Involved in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway and steroid hormone mediated signaling pathway. Acts upstream of or within oocyte maturation; response to steroid hormone; and signal transduction. Located in plasma membrane. Is expressed in several structures, including brain; gill; gonad; intestine; and sperm. Orthologous to human PAQR7 (progestin and adipoQ receptor family member 7).

GO:

id name namespace
GO:0000187 activation of MAPK activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00206576_00207640.mRNA True 1360 mRNA 0.51 1 206576 207935

Neighbor

gene id symbol gene type direction distance location
CI01000016_00200989_00201760 STMN1, STMN1A, STMN1B coding upstream 4437 200721 ~ 202139 (+)
CI01000016_00116237_00122376 NA coding upstream 82802 115163 ~ 123774 (+)
CI01000016_00104268_00104615 NA coding upstream 101527 100537 ~ 105049 (+)
CI01000016_00042281_00046080 NA coding upstream 160394 42244 ~ 46182 (+)
CI01000016_00229474_00234707 KCNV1 coding downstream 21487 229422 ~ 234915 (+)
CI01000016_00294886_00298452 NA coding downstream 86951 294886 ~ 299161 (+)
CI01000016_00318676_00446341 NA coding downstream 110741 318676 ~ 446341 (+)
CI01000016_00496095_00506965 NDUFAF6 coding downstream 288160 496095 ~ 507033 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding downstream 332697 540632 ~ 541723 (+)
G93143 NA non-coding upstream 18905 176999 ~ 187671 (+)
G93086 NA non-coding upstream 51896 153963 ~ 154680 (+)
G93133 NA non-coding upstream 76416 129313 ~ 130160 (+)
G93072 NA non-coding upstream 149640 56479 ~ 56936 (+)
G93071 NA non-coding upstream 178680 23660 ~ 27896 (+)
G93215 NA non-coding downstream 76265 284200 ~ 284433 (+)
G93216 NA non-coding downstream 76658 284593 ~ 284850 (+)
G93224 NA non-coding downstream 101354 309289 ~ 368179 (+)
G93157 NA non-coding downstream 242678 450613 ~ 457007 (+)
G93161 NA non-coding downstream 252505 460440 ~ 463979 (+)
G93406 NA other downstream 697465 905400 ~ 927532 (+)
G95439 NA other downstream 3654240 3862175 ~ 3862305 (+)
G95648 NA other downstream 4064701 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4626623 4829592 ~ 4837457 (+)
G95792 NA other downstream 5011945 5219880 ~ 5225941 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010083 paqr7b coding NC_007127.7 CM002900.2 34522977 ~ 34532888 (+)