CI01000016_00754785_00770356


Basic Information

Item Value
gene id CI01000016_00754785_00770356
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 754683 ~ 770356 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00754785_00770356.mRNA
GAAATAAAAGCATTGCTGTCTCTAAGGAACCAGCCATTTGATACATCAGATACATTCATTGAAAAGGCTCCATATCTACAGCAGAATTCAACTTATAAGATCAATGTCTACACTTTCAACAAAACATTAGAGTTTAAGGACAGAATCAAAAAGATTGATGCTCTAGACTTCCTGCCGTTTGAAGGGAAGGTCAATCTAAAGGATCCAGAACATGTTTTCTGTTTGCTGGAGGATTATGGCTCTGATCCTAATGATATCCCAGAGGAGCCTTTCCATTTGTACTTTGGGAGATGGATTGCAGATGGTCAAAGAGAATTAATTCGCTCTTACAGTGTGAAGAAGAGACATTTCATTGGGAACACTAGTATGGATGCTGGCCTTTCTTTCATCATGGCCAATCATGCCAAAGTAAAGGCTGATGATTTGGTTTACGATCCTTTTGTTGGAACAGGTAGTCTTTTGGTAGCATGTTCACACTTTGGGGCTTATGTATGTGGGACAGACATCGATTATAACACTATCCATGGAATAGGAAAAGCCAGCAGGAAGAATCAGAAATGGAGAGGACCAGATGAGAACATCCGAGCAAACCTGCGGCAGTATGGGACTGAGAGTCTCTATGTAGACGTCATGGTGTCCGATGCTTCCAAACCAGTTTGGAGAAAAAACGCACAGTTTGATGCCATTGTTACAGATCCTCCATATGGCATTCGTGAGTCCACGAGGAGAACGGGATCTCATAAAGATATCATCAAACCTCCTGAGGATTTGTACTGTGAGGAGATGGTGCCTCTTCACCCCTGTTTGACACTCATCAGCAACTGCGAACAAACTCTGTCCAGCCACACGTCACGAAGACTCATCACCATGGAGAAGACCAAGGAGCCTGAGGATTCGGACAAACTAGCGCACCTTGCTGACTCTCGCTTCACCCCATACCAGGGTCACAACTCATTCAGAGAGAAATACTTCAGTGGTCTCACTAAGAAGAACGGAAAGGACAGCAAAGCCACCCCAAGAAATGAAGATTAAAACATGGGGGAGAAACGGTTTTAAGTTGTATTTTTGTTTTGATACTTTTTAATATTCTTTTTATAACTTAATTGTCACATGTAAATATGTTGTTTCAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00754785_00770356.mRNA True 1134 mRNA 0.42 9 754683 770356

Neighbor

gene id symbol gene type direction distance location
CI01000016_00679328_00729780 NA coding downstream 24717 678792 ~ 729966 (-)
CI01000016_00601605_00607255 RSPO3 coding downstream 147428 600622 ~ 607255 (-)
CI01000016_00592794_00596916 NA coding downstream 157581 592130 ~ 597102 (-)
CI01000016_00589778_00591095 METTL6 coding downstream 163389 589672 ~ 591294 (-)
CI01000016_00581946_00586945 NA coding downstream 167686 581866 ~ 586997 (-)
CI01000016_00775184_00778097 HINT3 coding upstream 4302 774658 ~ 778097 (-)
CI01000016_00843272_00857193 NA coding upstream 72794 843150 ~ 857296 (-)
CI01000016_01088942_01089316 NA coding upstream 318196 1088552 ~ 1089339 (-)
CI01000016_01134396_01182271 OSBPL10 coding upstream 363458 1133814 ~ 1182271 (-)
CI01000016_01195747_01197970 KIAA1143 coding upstream 425361 1195717 ~ 1199062 (-)
G94073 NA non-coding downstream 8708 745672 ~ 745975 (-)
G94017 NA non-coding downstream 109803 644673 ~ 644880 (-)
G94011 NA non-coding downstream 118313 636167 ~ 636370 (-)
G93992 NA non-coding downstream 174900 579217 ~ 579783 (-)
G94106 NA non-coding upstream 27128 797484 ~ 797719 (-)
G94137 NA non-coding upstream 88412 858768 ~ 862962 (-)
G94213 NA non-coding upstream 206524 976880 ~ 978159 (-)
G94098 NA non-coding upstream 213211 983567 ~ 984870 (-)
G94786 NA other upstream 1500480 2270836 ~ 2276275 (-)
G95070 NA other upstream 2214904 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2865251 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3095405 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4142352 4918975 ~ 4922518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location