CI01000016_00772375_00772848


Basic Information

Item Value
gene id CI01000016_00772375_00772848
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 772270 ~ 772889 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00772375_00772848.mRNA
TTATTTAAAGCCTGTACGACATGCAATCTTCTCACTCGCAGCCTTTGTTGTGCCAACAGTAAAGCATGCTGAAAACTAGAGCCGTCCTGTGAGCCAAAGGTCACCATGGAGACGGATGAAGCACCTGCGCAGCATAAAGATGACAGGGCGGAGACGTGCACCGTGTCTGTCAAAGGTCTGACAGAGAACTGGCAGAAATGGTCCAACGACCACTGTGAGTATCAGAAACAAAATCCCTTCAGCAACGGCAAGGTGATTCCCCCGCAGATCCAGCGAGGACAGGAGGGCTACGGCAGGCCTTTAGAGGGCTCCAAAACAGAGCAGAGAGGAAAAGACGCCCACTCCCACATCAGCAGAGAGGTCACCGAGCTCTGCCAGGTCATTAAGGAGATCGGAGAAAGCGGAGACGACGGCAGGCCCGCTGTACGGTTCGGGATGCTGTTTGAGAGATACGTCACCATCTCTGATAAACTAGTGGGGGTTCTGCTGCGGGCGCGCAAGCAAGGGCTGGTGCACTTTGAAGGAGAGATGCTGTGGCAGGGGAGAGATGATGAAGTTCTCATCACCTTGTTACAGTGATTTAGAGCATTGATGGACACCATGTGCCTGCCTCAAAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00772375_00772848.mRNA True 620 mRNA 0.53 1 772270 772889

Neighbor

gene id symbol gene type direction distance location
CI01000016_00569502_00581271 NA coding upstream 190771 569502 ~ 581499 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding upstream 230547 540632 ~ 541723 (+)
CI01000016_00496095_00506965 NDUFAF6 coding upstream 265237 496095 ~ 507033 (+)
CI01000016_00318676_00446341 NA coding upstream 325929 318676 ~ 446341 (+)
CI01000016_00294886_00298452 NA coding upstream 473109 294886 ~ 299161 (+)
CI01000016_00885996_00887374 NA coding downstream 113107 885996 ~ 887478 (+)
CI01000016_00952494_00954683 NA coding downstream 179605 952494 ~ 954953 (+)
CI01000016_00959079_00960728 NA coding downstream 185764 958653 ~ 961060 (+)
CI01000016_00972599_01002933 NA coding downstream 199223 972112 ~ 1003172 (+)
CI01000016_01033465_01037665 NA coding downstream 260576 1033465 ~ 1038446 (+)
G93358 NA non-coding upstream 18431 753601 ~ 753839 (+)
G93357 NA non-coding upstream 19513 752523 ~ 752757 (+)
G93355 NA non-coding upstream 22712 749343 ~ 749558 (+)
G93349 NA non-coding upstream 42540 729504 ~ 729730 (+)
G93348 NA non-coding upstream 45541 726529 ~ 726729 (+)
G93364 NA non-coding downstream 905 773794 ~ 774244 (+)
G93367 NA non-coding downstream 5886 778775 ~ 779171 (+)
G93423 NA non-coding downstream 67277 840166 ~ 840495 (+)
G93410 NA non-coding downstream 89215 862104 ~ 868937 (+)
G93409 NA non-coding downstream 154951 927840 ~ 932801 (+)
G93406 NA other downstream 132511 905400 ~ 927532 (+)
G95439 NA other downstream 3089286 3862175 ~ 3862305 (+)
G95648 NA other downstream 3499747 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4061669 4829592 ~ 4837457 (+)
G95792 NA other downstream 4446991 5219880 ~ 5225941 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010921 si:dkey-29b11.3 coding NC_007127.7 CM002900.2 40040813 ~ 40043322 (-)