CI01000016_00775184_00778097 (HINT3)


Basic Information

Item Value
gene id CI01000016_00775184_00778097
gene name HINT3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 774658 ~ 778097 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00775184_00778097.mRNA
ATGGCAGCTGACATAAACACTCCAATACCTGAGATCGGCACAATGAATCAGACTGATGATGATGGATATGACAAAAAATGTATTTTCTGTAAAATCGTGAAGGGGGAGATGGGAACTGAGCTCCTGCACAACGATGAGACTATTTCCTGTTTCAGAGATATACACCCTGGAGCCCCTCATCACTATCTGGTTGTGCCAAGTAAACATGTGGGCAATTGTAAATCTCTCAGAAAAGAGCATGTACCATTAGTGGAGAAGATGGTGGAGATGGGGAAAGAGATGCTTCAAAAGAACAATGTTTGGTTTCCACTGGCCTCCGTTCTGCTCTGTCACACATCTGCATCTCCACGTTCTCGCACCCGTCAGTCAGATGGGCTTCATGTCACGCTTGGTCTACAGGCTAAACTCGTATTGGTTCATCTCGGCAGACCAGTTACTCCAAAGACTGAACTCTATGAGCTAAATGTACAGGAAGTGAGAGGAACTCAAAATACATTAATGTTCGAGATGCCCAGAGCCTTGTTACTCATAACAACAGTCCAAGTCAATCTGTTTGTGATGACAAAAGGCCACAGAGGAGTGCTTCGGGGTTATAATACTCATTATTGCTACGTTCATTAGTTAGTTATATTGTTGGCTAGACGGGCCAATCAAATTTGCAGCTACAAAATTGCAGCTACTTTTGAATTGATTTGAGAGAAGAAAAAAAACAAGCTGAATAGTAATGACATTGATAAATTTGACAGAATCATTAATCTTTTATGGTGAACAGTTGGGCTTCTTTCAGTTTTACTCAAATAATATAATTTTTAAAGCTGCAAAGCAATGACAAAGACTTTTTAAAATATGAACAAGCTGAAAATGGCAATTAATCTCAATAATTGGATTTAGCTCTGGCCAAATCCACTACTGAATGATTTCAGCATCAGAACACGGCAGTGTTTTGTCATTCTGTACTGCACCTGTGATGAGCAAGTCTGTTTTCCTTCATATAACACTAAATGAAATGTTTTAACTCTGTTTATGCTATGACATAGATTGTACTGTATAGATATAAGGCCTGTATGTCTCTGATGTATTTAATTATTGAGTGATGTGAAGTTGTATTTGCACTGTATGATGTCCGTAAGCATGTAAACAAAATAAA

Function

symbol description
hint3 Predicted to enable catalytic activity. Orthologous to human HINT3 (histidine triad nucleotide binding protein 3).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00775184_00778097.mRNA True 1147 mRNA 0.39 5 774658 778097

Neighbor

gene id symbol gene type direction distance location
CI01000016_00754785_00770356 NA coding downstream 4302 754683 ~ 770356 (-)
CI01000016_00679328_00729780 NA coding downstream 44692 678792 ~ 729966 (-)
CI01000016_00601605_00607255 RSPO3 coding downstream 167403 600622 ~ 607255 (-)
CI01000016_00592794_00596916 NA coding downstream 177556 592130 ~ 597102 (-)
CI01000016_00589778_00591095 METTL6 coding downstream 183364 589672 ~ 591294 (-)
CI01000016_00843272_00857193 NA coding upstream 65053 843150 ~ 857296 (-)
CI01000016_01088942_01089316 NA coding upstream 310455 1088552 ~ 1089339 (-)
CI01000016_01134396_01182271 OSBPL10 coding upstream 355717 1133814 ~ 1182271 (-)
CI01000016_01195747_01197970 KIAA1143 coding upstream 417620 1195717 ~ 1199062 (-)
CI01000016_01199558_01199730 TMEM42 coding upstream 421448 1199545 ~ 1199730 (-)
G94073 NA non-coding downstream 28683 745672 ~ 745975 (-)
G94017 NA non-coding downstream 129778 644673 ~ 644880 (-)
G94011 NA non-coding downstream 138288 636167 ~ 636370 (-)
G93992 NA non-coding downstream 194875 579217 ~ 579783 (-)
G94106 NA non-coding upstream 19387 797484 ~ 797719 (-)
G94137 NA non-coding upstream 80671 858768 ~ 862962 (-)
G94213 NA non-coding upstream 198783 976880 ~ 978159 (-)
G94098 NA non-coding upstream 205470 983567 ~ 984870 (-)
G94786 NA other upstream 1492739 2270836 ~ 2276275 (-)
G95070 NA other upstream 2207163 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2857510 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3087664 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4134611 4918975 ~ 4922518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010149 hint3 coding NC_007127.7 CM002900.2 40024883 ~ 40031779 (+)
bowfin (Amia calva) AMCG00003989 NA coding CM030121.1 CM030121.1 28373146 ~ 28379173 (+)