CI01000016_00959079_00960728


Basic Information

Item Value
gene id CI01000016_00959079_00960728
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 958653 ~ 961060 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00959079_00960728.mRNA
ACATAAAAGAGATCCAATCTGCTGTATGCTTTTACAGAAAAGCCTTTTACACCTATGATTCTTACACAGATTGATTGTTGAAATTTGTGTTTTATTTGTGAGAGAAAGGAAAAGAAAAGGAGCTCTTTGTCTCTTAAAGGGATAGTTCACTCACCCGTATGACTTTCACGAAGCACTTGCTGTCACTTGTTCAGTCGTTCTGCTCGTCTCTCTTGTCTCCATCTGCTGTAGGTGTGTGTTTTCTCGCGTGTTGTCCTGATCCAGCTTACTCAGGCTTTTCTAACAGGCCACGGCGGGGCCATCAGGCCTGCATGCTCTCATAATTACACAGGCTCTTAGGCATAGGCAACATGCTGATGCTGGAGGTAGATAATGATGACGACCGTGTAACACCGTGACCCCTCCATCACGCACGAGCTCCCTGTCATGGGACGTCCAGCGCTTCTTTCTGTTCTGCTGATCTTCCACATGCCCAGCTCAAGCCCGTGGGCTCTGTCAGATCTTGGAGTGCGTTTCAGGCAATTTGGCCGGCACCTGATCTCGACCTTAATCCGTTCCCCCCTCATCTCTTCGTCTCTGCCTATTCATGAGCAGAATAGCCTGAGGGAAGTCTTAATGGTGTGGCATCGGGGTGACCCATCAAATTTGGTTCCACTCGACTCACTAATGCCTGTGAGACTGGGAAATCAAGCTGCTATGGAGCGATACACTCTCTGAGGATTTGTCTGAACGGGGCATGCGTGAGGCCAGAAATCACTAAGTGAGAGACCTAGTTGAAAAGGGTGGAGCCTTATTCTAAATAAATAAATATTTTAATATTCTCTTTTAAATAAAAGAATGTATTTGTTTTAAAAGATAAATGAGTTTATTTATATTTTATTTTATTTATTTATTTGAATGGCCTTCAAAGATGCACTTTTGCAGCCAGAGGTGTAGTTACAACATCCACCAGCAGGGGCTAACCGCACCATGCTACCTGGCCAAACCACAAGACAACCATATTCCTTAATCTATCACAAAGCGGCCTGTTTATATATAAAACCACGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00959079_00960728.mRNA True 1049 mRNA 0.44 2 958653 961060

Neighbor

gene id symbol gene type direction distance location
CI01000016_00952494_00954683 NA coding upstream 3700 952494 ~ 954953 (+)
CI01000016_00885996_00887374 NA coding upstream 71175 885996 ~ 887478 (+)
CI01000016_00772375_00772848 NA coding upstream 185764 772270 ~ 772889 (+)
CI01000016_00569502_00581271 NA coding upstream 377154 569502 ~ 581499 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding upstream 416930 540632 ~ 541723 (+)
CI01000016_00972599_01002933 NA coding downstream 11052 972112 ~ 1003172 (+)
CI01000016_01033465_01037665 NA coding downstream 72405 1033465 ~ 1038446 (+)
CI01000016_01052539_01073915 NA coding downstream 91479 1052539 ~ 1075533 (+)
CI01000016_01122656_01129008 STT3B coding downstream 161596 1122656 ~ 1129008 (+)
CI01000016_01183747_01191853 GPD1L coding downstream 222687 1183747 ~ 1192858 (+)
G93409 NA non-coding upstream 25852 927840 ~ 932801 (+)
G93410 NA non-coding upstream 89716 862104 ~ 868937 (+)
G93423 NA non-coding upstream 118158 840166 ~ 840495 (+)
G93367 NA non-coding upstream 179482 778775 ~ 779171 (+)
G93364 NA non-coding upstream 184409 773794 ~ 774244 (+)
G93414 NA non-coding downstream 1519 962579 ~ 1040425 (+)
G93413 NA non-coding downstream 117768 1078828 ~ 1079935 (+)
G93434 NA non-coding downstream 123407 1084467 ~ 1084767 (+)
G93442 NA non-coding downstream 234650 1195710 ~ 1198373 (+)
G93476 NA non-coding downstream 251284 1212344 ~ 1212621 (+)
G93406 NA other upstream 31121 905400 ~ 927532 (+)
G95439 NA other downstream 2901115 3862175 ~ 3862305 (+)
G95648 NA other downstream 3311576 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3873498 4829592 ~ 4837457 (+)
G95792 NA other downstream 4258820 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 4444809 5405791 ~ 5407963 (+)

Expression


Co-expression Network