CI01000016_01052539_01073915


Basic Information

Item Value
gene id CI01000016_01052539_01073915
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1052539 ~ 1075533 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01052539_01073915.mRNA
TGTGTTTGAATGACCGGTGCCCCTTTCAGTCCCAGAGAGCCAAGGTGGCCTTTTATCACAGGAAAGTCTTGGAGAGACAAGAGTTTGACGCCATTTGGTCTCTCTGTGCTAGTGTTTGCTTGATCGCATCAGTGCATTTAGGTCAGAGTCTCAGGAACCTGACAACAGCGCTGGAGATGAAAGCAGATGGGATGCATCCTTTACATAATCCATTTCAGCTTCGTCAACTGTGTAAGTTCTGTGACTTGGAGGTATCCAATTGTAACGGCACCGGAACCTGTGACACCAACTGCAGCATCACGTCCATCTGTGCCCAGCCTGATGAGATCTGTGTGGCTATCTGGAGGAAGATTAATGACAACACCACGATTGAGACATTGTGCCATAAACCCTCTGAACCCCTCTACGGCATCATGGTGGAGAACTACAACAGCACCAAGTGTGAAATGAGAAAGAGGATGTCAAACAGAGGCCCTTTCCACATCTGCTCCTGCAACGCCGAGGAGTGCAACGACAAGCTGATATTCACACTCCTGTGTAAAAACATATATCGTAAGCTAATGAGGACAGATTCCATGATGTTAAATTGTGGATATAAGTTAAAAAAAGATGGCTTTTGTTTGGAGGTGTTTGATGCCTGTAGTGTTGACTATGTGGGTACAGCCAGGTACATGGCTCCAGAAGTGCTGGAATCGAGGATCAACCTTGAGAACATCGAGTCATTCAAGCAAACCGATGTCTACTCCATGGCCCTGGTACTGTGGGAGATCACATCCAGGTGTAATGCCATCGGTGGATGCGTTCGCTTGTGGAGTCAGCTTCTCCGCAGGGTCCCAATCACAGTCCTCCACTTCCTGTCCTGGGCTGCATGCTGGCCTAGCCCCTTCCTGTGGGCCAGAGTGCTGGGCAAGAACCACAAAACATGCTCTCCAATCATGAGCAAGCCGCTCCAAAAGGTAAAGGACTACGAACCTCCATTCGGCTCTAAAGTCCGAGAGCACCCTTGTGTGGAGAGCATGAAAGACAATGTGCTACGAGACCGGGGCAGGCCAGAGATCCCCAACAGCTGGATGAAACACCAGGGTGTGGCTACAGTCTGTGCCACCATCAACGAGTGCTGGGACCACGATCCCGAGGCCCGGCTTACAGCGCAGTGTGTGGCGGAGCGCTTCAACGACATGGACGACGACCTAGACAAGTTGTCCACCTGCAGCAGCTCTGAGGAGAAGATTCCAGAAGATTGCTCTGTGAGCGTGAGCGATGACAAATGAGAGCGAGAGAGAGGAAGGTCACTCTCTCTCTGCAAAAACTGAATGTGTGGATCCTTCCATTGAGGTGGAGTGGAAGAATATGGCCTTTTCATTAAGCTTTGTTTCATAACCAAAGATTTCATGCACTTTATCAGATTATGCATAGCTCACACTGAGGAAGGTCAGGCTACTGCGCAAGAGGAGCTGGACAGATGCTGGGTTTTCTCCTCTGACAGCTGACCAAGAGCCAAATGTAATCAGGAAAATGTTTTTGCCTTGACACTAAAGATTCATAGGAGATTGTAAGACTTTCTACAGATCAGTTCAGGATTTTCTGGATTTATGAAAGAATGTGTTTGGTGAGAGATTTGTGTGTTTGTGTGCACGAGTGTGTAAGAATACTAGCGTGTGTGTTTGTATGTTTGGTGTTGCTTTTACAGAGAAGTGTATTGTTCTTGTTAGCCAAAGAAAAAGTATGTTGTAAATACTTTTTTCGACATAAAAATCAACCCACACTATTGAGAGAGCTAAAAAGGGAAGAATATGCTGTACATACCTAGGGCTGGGCGGTATATCGTGTTTGTACGATATATCAATATATTTTTATAAACTAAATAGGATGAGGCAATACCGTTTATATCAATATGTGGTGTTTTCCTCAGTGCATCACTTACATTTCACAGGTATATTCTTAGAAGGTCATGCATTTTACTGTCAGATGTGGATGAGCCTTATGCAAGATAGTCTCCACTAAACTTCACAGACTTCAGTGAACGAGCACTGCCATGCTCCAAACCGACGGAAATACAGAGATATGACTTTTTTTAGCCATATCGCCCAGCCCTAAACATACCAAAAAATGTGTTAATCGAACAGTATTTTGAAATCACAAAATGCCTCATATGTTCACATATTCTGGGTATTGAATTGTGCCTCTTTTACTACTTTTCATGTAATATATTGTAAATCTTTGATGATTAAAATACATTTATGTACAGTATTGACACTAAAAATGGGTCACCTTTTTTATTTTGTTCATTGTGTAGTATTCTTTGAATTATGAGTTTTTGGAAATGTGTGACAGTTCCTTTCATATTAATGATGATTGACAGCCAGATATTAACTGCAATACCGCCGCTGGTTGCAACAATGTTTTCAGTTAGTCTTTAAAAAACATTCCATTAACCATTTGTCACGCACGCCCACTAGTTCAGTGTTGTGGGAAACAAACCTCTTTAATGAAAATCAGCTGTCAAATATGCCTCGGAGAACTGACACCTGCATTTCAGTACATAAGCCTCAGGGTTTCTACTACAAGAACACCTTTAGCTGTTTCTAAATCAAGAAGTTGTTGTGAGAAAGTATCTTTTACCACAGAAGCCAGTGGGTAACAGTGTAAAACTGGATTTTTGTCATTTTCAAAAGAAAATCCAAAACCCGCTTTTGGTGATTTTAAGCATTGTTATTTCAGTATTATTTATATAATATTATAGTATTTATAAATATTTTGAATTAGCTGATAGATTGATTTAGTGTTGAATTTTTCATTTATTCAGACAAAATAGTACAGAATTTAAATATCTGTTTTAGATGGGTTATCAACATGAAACTCATGTTGTATTTTTAATTTATTCAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01052539_01073915.mRNA True 2889 mRNA 0.42 9 1052539 1075533

Neighbor

gene id symbol gene type direction distance location
CI01000016_01033465_01037665 NA coding upstream 14093 1033465 ~ 1038446 (+)
CI01000016_00972599_01002933 NA coding upstream 49367 972112 ~ 1003172 (+)
CI01000016_00959079_00960728 NA coding upstream 91479 958653 ~ 961060 (+)
CI01000016_00952494_00954683 NA coding upstream 97586 952494 ~ 954953 (+)
CI01000016_00885996_00887374 NA coding upstream 165061 885996 ~ 887478 (+)
CI01000016_01122656_01129008 STT3B coding downstream 47123 1122656 ~ 1129008 (+)
CI01000016_01183747_01191853 GPD1L coding downstream 108214 1183747 ~ 1192858 (+)
CI01000016_01217119_01220858 EBAG9 coding downstream 141586 1217119 ~ 1221937 (+)
CI01000016_01238151_01242924 GDF6, GDF6A coding downstream 162458 1237991 ~ 1242960 (+)
CI01000016_01253760_01273553 NA coding downstream 177873 1253406 ~ 1273953 (+)
G93414 NA non-coding upstream 12114 962579 ~ 1040425 (+)
G93409 NA non-coding upstream 119738 927840 ~ 932801 (+)
G93410 NA non-coding upstream 183602 862104 ~ 868937 (+)
G93423 NA non-coding upstream 212044 840166 ~ 840495 (+)
G93367 NA non-coding upstream 273368 778775 ~ 779171 (+)
G93413 NA non-coding downstream 3295 1078828 ~ 1079935 (+)
G93434 NA non-coding downstream 8934 1084467 ~ 1084767 (+)
G93442 NA non-coding downstream 120177 1195710 ~ 1198373 (+)
G93476 NA non-coding downstream 136811 1212344 ~ 1212621 (+)
G93449 NA non-coding downstream 152665 1228198 ~ 1235846 (+)
G93406 NA other upstream 125007 905400 ~ 927532 (+)
G95439 NA other downstream 2786642 3862175 ~ 3862305 (+)
G95648 NA other downstream 3197103 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3759025 4829592 ~ 4837457 (+)
G95792 NA other downstream 4144347 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 4330336 5405791 ~ 5407963 (+)

Expression


Co-expression Network