CI01000016_01408124_01408966 (TMEM74)


Basic Information

Item Value
gene id CI01000016_01408124_01408966
gene name TMEM74
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1406636 ~ 1409165 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01408124_01408966.mRNA
CTTTAAAACGGAGCGTGGGAGGGAGAACGGCGGAGAGCAGCAGCCGGGAGGCCAAAATGTTCATCAGACGAGAAGGTATTAACAAAAACGATTGATTATACCAAAGAAACAATGTGTATTTAGCGTCTAAATATAGCGAGATGCGAAATGTGTCCTGTTTGTGTCGCTTTTTCTAGGGGATATTCTATGACCTATTGATGAGTGTAACGATGCAGCCTTATGGACACGTGCCAAAACTACTGTATAGCCTATATGTGTCTGTCATATACCCGTTTTAAATCAGTGTTTATTGCGTAAACAGTGTAATGTGTTAGTTATTGCAGATATTGTGAATTGTTGGATGACTTTATTGTCTTTTTTTTCGTGTAGCATATATAGACCAATAATCGTTTGACACCTTTTTATACTGATATATTCGCGCTTTTCAAGTTTACTGGTTATTGTTCCTTAATATTAATTCTAAAGATGAAAATTAATTTAGATAGATTTCAAAACAACTTTGCATAAATGTAATGAAATAAATTAAAATAATATGAATATTGGTTATTCAAATATTTAGACTACATTTACATGACATCGCCCATAAAACAAATGTATCATGATTATATCGATCTCTACAGTGAAGTGCCTATATCCCCATCGGCCGTTGAGCCGTGCGTTTAAAAGGGACTTATAGCTTATCTTGGTTTTATACGGATTGCTTTGCTAATTGGATATTGAAGCAGTAGGACTAATCAGTAACTTTAATCGTCTTTCATTACAGAGGCGAAGGATTTCGTTCAAATACAGTCATTAACTGTTGCTAACCCATTGTAGTGTACATAATGGGTTAAAGCAGTAAATAGTATGCATGAGTCACGGTTGTGCTTGAAATCAGGGACACGTGCTGTAGTACGCTAGACTGCATGACCAGCAAAGGCAAAATGCAGTAACACTTTGTATAAAGTAAACATATGGTCAAAATGGTGTAGTGTGCTCAAACAGGTTTGGCTCAAATATGCACCAATTCAGAAACATTTCAGAGCATTGTAAATTTCAATGAAAAATGTTTAAGTGAGGTCTTTTACAGAAATGCTTGTCACATAGTATTTAATGATAGTTATATAGTTTGTCAAGAGCAAATAAGAATTTTAATCGTAGGCTAATAGCATGCAGCAAAGGTAAAATGTGCAATATATTAAATTATTAATATTGGAATATTCATAATGAATAGGCTATGTTTTTTTATTGCAGTATGCTATTTAGTTATCATTGTTTCAAAAGTAGACGTACTGTACAACAACAACAAAAATGTTATTCATATTGGCTATCAGCCATTTAAATGTACAAATAACTGTTAAAAAAACAACAACAACTGGTCGATCTCTAACTACAATGTAGATTCTGTGAGTTGATTTCTCATCTGAATTATTGTAATTTGTGTTTATAGGTATAGTGAGCATGGCTTGATGCTGCAGGAAATCAAGGTGATCCGTGGGAGTGGATCTGATGGCCTCAGTGGAGTTACTCTACATAGATAATAGAGGGGCAAGACCCGATCCCCCTGGGGTACTGGATTGGTCTTCTAGTCCTCTTCATGTTCACAGGCTAAACAGTTTGGTGGAAGAAGCTTCTCCCACTCTGAAGGTGCCTGCCTGTGAGGGACAGTGTAATTCAGCACCAAGGACGGCTCCCCTCAGAGGACAACATGGCCAGCACCGCCATCATCCCTCAGAGAAGGTCAGGGTGTGTTGTGACGAGGAGCTGGAGACCTCGTTCACTTACATTGATGAAAACGTCAATCTCCGGTTGGCCACCCCGGACACGAGCGAGAAAAGCGCTCGCCATGCAACTTCGCTCCACGACTCCTCGAGCGAAATACGTCCCGAGGGCCTCCAGGAGTTGTCGCTGATGTCTGACATCGATCTCAGCTCGGAGAGTTCTGGGAAATCCGTGGATTATGGGTTCATCAGCGCAGTTACATTCCTCATCACCGGGATCTCGCTGGTGATCATATCGTACACGGTCCCTCGTGACGTCACAGTGAACCCAGACAATGTCACCGCACGCGAAATGGAAAGACTCGAAAACGAGAGTGCCAGAATAGGTGCACACCTGGACAGGTGCGTTATCGCAGGCCTTTGCCTTCTCACCTTAGGCGGAGTGGTGCTGTCCACTCTGCTAATGATTTCGATATGGAAGGGTGAGATGTACAGGAGGAAAGCCTTTGCTTATTCCAAGCACTCCGCAAAGCTCTACGGTTCGATTAATTTAAGAACAAGATCGAGCCCCAGTCGCTCTTCGCCACCACATAGTTTGGTCGAGGAGGAGAATGGTAATGCCATTAGTTGACTGTTTTCTCCAGTTCTCTATTGGACTGCCAACATAACATTGACCTTTCCAGCATGGCCAAAAGAGTTTTCTGACCTTGTATCAGTGGCAATTGCTTACTGATGCAGAAAAACCTAGTATCACATAACAGATTTCTCAGGCTCCAGAAATATACAGCATGATAACATTTGCATTTGTCATAAAGCAAGTTACTTTTTGA

Function

symbol description
tmem74 Involved in macroautophagy. Predicted to be located in autophagosome membrane; cytoplasmic vesicle; and lysosomal membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01408124_01408966.mRNA True 2530 mRNA 0.41 1 1406636 1409165

Neighbor

gene id symbol gene type direction distance location
CI01000016_01277792_01304615 NA coding upstream 101874 1276928 ~ 1304762 (+)
CI01000016_01253760_01273553 NA coding upstream 132683 1253406 ~ 1273953 (+)
CI01000016_01238151_01242924 GDF6, GDF6A coding upstream 163676 1237991 ~ 1242960 (+)
CI01000016_01217119_01220858 EBAG9 coding upstream 184699 1217119 ~ 1221937 (+)
CI01000016_01183747_01191853 GPD1L coding upstream 213778 1183747 ~ 1192858 (+)
CI01000016_01476236_01476607 NA coding downstream 67071 1476236 ~ 1476762 (+)
CI01000016_01509959_01560806 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding downstream 100794 1509959 ~ 1561122 (+)
CI01000016_01563821_01567070 NA coding downstream 153233 1562398 ~ 1567529 (+)
CI01000016_01588035_01601276 RSPO2 coding downstream 177905 1587070 ~ 1601909 (+)
CI01000016_01656995_01657299 NA coding downstream 247830 1656995 ~ 1658390 (+)
G93483 NA non-coding upstream 63838 1340452 ~ 1342798 (+)
G93497 NA non-coding upstream 144429 1261920 ~ 1262207 (+)
G93449 NA non-coding upstream 170790 1228198 ~ 1235846 (+)
G93476 NA non-coding upstream 194015 1212344 ~ 1212621 (+)
G93442 NA non-coding upstream 208263 1195710 ~ 1198373 (+)
G93598 NA non-coding downstream 12455 1421620 ~ 1449437 (+)
G93567 NA non-coding downstream 52435 1461600 ~ 1461978 (+)
G93565 NA non-coding downstream 52952 1462117 ~ 1469355 (+)
G93624 NA non-coding downstream 87228 1496393 ~ 1554026 (+)
G93711 NA non-coding downstream 504632 1913797 ~ 1942317 (+)
G93406 NA other upstream 479104 905400 ~ 927532 (+)
G95439 NA other downstream 2453010 3862175 ~ 3862305 (+)
G95648 NA other downstream 2863471 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3425393 4829592 ~ 4837457 (+)
G95792 NA other downstream 3810715 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3996704 5405791 ~ 5407963 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010905 NA non-coding NC_007127.7 CM002900.2 38802405 ~ 38804152 (-)